RNA–Protein interactions for RNA: ENST00000355560.4

CLK2-201, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CLK2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-201ENST00000355560 NMRK1Q9NWW6 199 aa24.89■■□□□ 1.57
CLK2-201ENST00000355560 GPRC5BQ9NZH0 403 aa24.89■■□□□ 1.57
CLK2-201ENST00000355560 FZD4Q9ULV1 537 aa24.89■■□□□ 1.57
CLK2-201ENST00000355560 SERTM1A2A2V5 107 aa24.88■■□□□ 1.57
CLK2-201ENST00000355560 H3BNX3 289 aa24.88■■□□□ 1.57
CLK2-201ENST00000355560 ASGR2P07307 311 aa24.88■■□□□ 1.57
CLK2-201ENST00000355560 BCKDHAP12694 445 aa24.88■■□□□ 1.57
CLK2-201ENST00000355560 DGKQP52824 942 aa24.88■■□□□ 1.57
CLK2-201ENST00000355560 PCDH1Q08174 1060 aa24.88■■□□□ 1.57
CLK2-201ENST00000355560 RNF111Q6ZNA4 994 aa24.88■■□□□ 1.57
CLK2-201ENST00000355560 DHDDSQ86SQ9 333 aa24.88■■□□□ 1.57
CLK2-201ENST00000355560 TMPRSS11BQ86T26 416 aa24.88■■□□□ 1.57
CLK2-201ENST00000355560 PHC3Q8NDX5 983 aa24.88■■□□□ 1.57
CLK2-201ENST00000355560 TFGQ92734 400 aaPredicted RBP24.88■■□□□ 1.57
CLK2-201ENST00000355560 CMTM7Q96FZ5 175 aa24.88■■□□□ 1.57
CLK2-201ENST00000355560 MRGPRX1Q96LB2 322 aa24.88■■□□□ 1.57
CLK2-201ENST00000355560 MYOCQ99972 504 aa24.88■■□□□ 1.57
CLK2-201ENST00000355560 SLAMF8Q9P0V8 285 aa24.88■■□□□ 1.57
CLK2-201ENST00000355560 DLGAP4Q9Y2H0 992 aa24.88■■□□□ 1.57
CLK2-201ENST00000355560 H0YIV9 168 aa24.88■■□□□ 1.57
CLK2-201ENST00000355560 IFRD1O00458 451 aaPredicted RBP24.88■■□□□ 1.57
CLK2-201ENST00000355560 PPP2CBP62714 309 aa24.88■■□□□ 1.57
CLK2-201ENST00000355560 PPP2CAP67775 309 aa24.88■■□□□ 1.57
CLK2-201ENST00000355560 TAP2Q03519 686 aa24.88■■□□□ 1.57
CLK2-201ENST00000355560 DDX39BQ13838 428 aaKnown RBP24.88■■□□□ 1.57
CLK2-201ENST00000355560 CHST15Q7LFX5 561 aaPredicted RBP24.88■■□□□ 1.57
CLK2-201ENST00000355560 DCUN1D3Q8IWE4 304 aa24.88■■□□□ 1.57
CLK2-201ENST00000355560 CLHC1Q8NHS4 586 aa24.88■■□□□ 1.57
CLK2-201ENST00000355560 DNAJB14Q8TBM8 379 aa24.88■■□□□ 1.57
CLK2-201ENST00000355560 APIPQ96GX9 242 aa24.88■■□□□ 1.57
CLK2-201ENST00000355560 MTERF1Q99551 399 aaKnown RBP24.88■■□□□ 1.57
CLK2-201ENST00000355560 SGPP1Q9BX95 441 aa24.88■■□□□ 1.57
CLK2-201ENST00000355560 TRIM8Q9BZR9 551 aa24.88■■□□□ 1.57
CLK2-201ENST00000355560 NPIPB8E9PQR5 432 aa24.87■■□□□ 1.57
CLK2-201ENST00000355560 PNLIPRP1P54315 467 aa24.87■■□□□ 1.57
CLK2-201ENST00000355560 ZNF33BQ06732 778 aa24.87■■□□□ 1.57
CLK2-201ENST00000355560 CSTF3Q12996 717 aaKnown RBP24.87■■□□□ 1.57
CLK2-201ENST00000355560 C6orf10Q5SRN2 563 aa24.87■■□□□ 1.57
CLK2-201ENST00000355560 RAD51AP1Q96B01 352 aa24.87■■□□□ 1.57
CLK2-201ENST00000355560 SGK2Q9HBY8 427 aa24.87■■□□□ 1.57
CLK2-201ENST00000355560 CMTM6Q9NX76 183 aa24.87■■□□□ 1.57
CLK2-201ENST00000355560 GMPR2Q9P2T1 348 aaKnown RBP24.87■■□□□ 1.57
CLK2-201ENST00000355560 CFAP20Q9Y6A4 193 aaKnown RBP24.87■■□□□ 1.57
CLK2-201ENST00000355560 MYO10Q9HD67 2058 aa24.87■■□□□ 1.57
CLK2-201ENST00000355560 NVLO15381 856 aaKnown RBP24.86■■□□□ 1.57
CLK2-201ENST00000355560 SLC31A1O15431 190 aa24.86■■□□□ 1.57
CLK2-201ENST00000355560 FUCA1P04066 466 aa24.86■■□□□ 1.57
CLK2-201ENST00000355560 ACADMP11310 421 aa24.86■■□□□ 1.57
CLK2-201ENST00000355560 ACP5P13686 325 aa24.86■■□□□ 1.57
CLK2-201ENST00000355560 NPPBP16860 134 aa24.86■■□□□ 1.57
CLK2-201ENST00000355560 RPL10P27635 214 aaKnown RBP24.86■■□□□ 1.57
CLK2-201ENST00000355560 FAM174BQ3ZCQ3 159 aa24.86■■□□□ 1.57
CLK2-201ENST00000355560 KIAA1324Q6UXG2 1013 aaKnown RBP24.86■■□□□ 1.57
CLK2-201ENST00000355560 USP30Q70CQ3 517 aa24.86■■□□□ 1.57
CLK2-201ENST00000355560 SPATA24Q86W54 205 aa24.86■■□□□ 1.57
CLK2-201ENST00000355560 LRRC56Q8IYG6 542 aaPredicted RBP24.86■■□□□ 1.57
CLK2-201ENST00000355560 KRTCAP2Q8N6L1 136 aa24.86■■□□□ 1.57
CLK2-201ENST00000355560 GLB1L3Q8NCI6 653 aaPredicted RBP24.86■■□□□ 1.57
CLK2-201ENST00000355560 CD93Q9NPY3 652 aa24.86■■□□□ 1.57
CLK2-201ENST00000355560 CCDC177Q9NQR7 707 aaPredicted RBP24.86■■□□□ 1.57
CLK2-201ENST00000355560 PLAGL1Q9UM63 463 aa24.86■■□□□ 1.57
CLK2-201ENST00000355560 NCKAP1Q9Y2A7 1128 aa24.86■■□□□ 1.57
CLK2-201ENST00000355560 TMED5Q9Y3A6 229 aa24.86■■□□□ 1.57
CLK2-201ENST00000355560 NARSO43776 548 aaKnown RBP24.86■■□□□ 1.57
CLK2-201ENST00000355560 MUM1Q2TAK8 710 aa24.86■■□□□ 1.57
CLK2-201ENST00000355560 LRIT3Q3SXY7 679 aa24.86■■□□□ 1.57
CLK2-201ENST00000355560 SLCO4C1Q6ZQN7 724 aa24.86■■□□□ 1.57
CLK2-201ENST00000355560 KIAA2013Q8IYS2 634 aa24.86■■□□□ 1.57
CLK2-201ENST00000355560 DPP10Q8N608 796 aa24.86■■□□□ 1.57
CLK2-201ENST00000355560 APOLD1Q96LR9 279 aa24.86■■□□□ 1.57
CLK2-201ENST00000355560 IL17FQ96PD4 163 aa24.86■■□□□ 1.57
CLK2-201ENST00000355560 UHRF1Q96T88 793 aaPredicted RBP24.86■■□□□ 1.57
CLK2-201ENST00000355560 SH2B3Q9UQQ2 575 aa24.86■■□□□ 1.57
CLK2-201ENST00000355560 TDRKHQ9Y2W6 561 aaKnown RBP24.86■■□□□ 1.57
CLK2-201ENST00000355560 DYRK1BQ9Y463 629 aa24.86■■□□□ 1.57
CLK2-201ENST00000355560 PCDHGA11Q9Y5H2 935 aa24.86■■□□□ 1.57
CLK2-201ENST00000355560 PCDHA9Q9Y5H5 950 aa24.86■■□□□ 1.57
CLK2-201ENST00000355560 KLHL33A6NCF5 533 aa24.85■■□□□ 1.57
CLK2-201ENST00000355560 MBTPS2O43462 519 aa24.85■■□□□ 1.57
CLK2-201ENST00000355560 SLC35G4P0C7Q5 338 aa24.85■■□□□ 1.57
CLK2-201ENST00000355560 AMD1P17707 334 aa24.85■■□□□ 1.57
CLK2-201ENST00000355560 TRAP1Q12931 704 aaKnown RBP24.85■■□□□ 1.57
CLK2-201ENST00000355560 RABL3Q5HYI8 236 aa24.85■■□□□ 1.57
CLK2-201ENST00000355560 TMEM92Q6UXU6 159 aa24.85■■□□□ 1.57
CLK2-201ENST00000355560 SLC13A3Q8WWT9 602 aa24.85■■□□□ 1.57
CLK2-201ENST00000355560 CLMPQ9H6B4 373 aa24.85■■□□□ 1.57
CLK2-201ENST00000355560 TMEM265A0A087WTH1 108 aa24.85■■□□□ 1.57
CLK2-201ENST00000355560 NPPAP01160 153 aa24.85■■□□□ 1.57
CLK2-201ENST00000355560 NDUFV2P19404 249 aa24.85■■□□□ 1.57
CLK2-201ENST00000355560 KELP23276 732 aa24.85■■□□□ 1.57
CLK2-201ENST00000355560 MAPK1P28482 360 aa24.85■■□□□ 1.57
CLK2-201ENST00000355560 SMAD4Q13485 552 aaKnown RBP24.85■■□□□ 1.57
CLK2-201ENST00000355560 E2F2Q14209 437 aa24.85■■□□□ 1.57
CLK2-201ENST00000355560 CATSPEREQ5SY80 951 aa24.85■■□□□ 1.57
CLK2-201ENST00000355560 ADNP2Q6IQ32 1131 aa24.85■■□□□ 1.57
CLK2-201ENST00000355560 GALNT13Q8IUC8 556 aa24.85■■□□□ 1.57
CLK2-201ENST00000355560 OR5K2Q8NHB8 316 aa24.85■■□□□ 1.57
CLK2-201ENST00000355560 TMEM125Q96AQ2 219 aa24.85■■□□□ 1.57
CLK2-201ENST00000355560 OSGEPL1Q9H4B0 414 aa24.85■■□□□ 1.57
CLK2-201ENST00000355560 DNAJA2O60884 412 aa24.84■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms