RNA–Protein interactions for RNA: ENST00000354674.4

SYNE1-203, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 3,154 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-203ENST00000354674 ZC4H2Q9NQZ6 224 aa9.85□□□□□ -0.83
SYNE1-203ENST00000354674 IARS2Q9NSE4 1012 aaKnown RBP9.85□□□□□ -0.83
SYNE1-203ENST00000354674 IL36AQ9UHA7 158 aa9.85□□□□□ -0.83
SYNE1-203ENST00000354674 MAGED1Q9Y5V3 778 aaPredicted RBP9.85□□□□□ -0.83
SYNE1-203ENST00000354674 TBC1D3BA6NDS4 549 aa9.85□□□□□ -0.83
SYNE1-203ENST00000354674 LEFTY1O75610 366 aa9.85□□□□□ -0.83
SYNE1-203ENST00000354674 APODP05090 189 aa9.85□□□□□ -0.83
SYNE1-203ENST00000354674 POLR2CP19387 275 aaPredicted RBP9.85□□□□□ -0.83
SYNE1-203ENST00000354674 LPOP22079 712 aaPredicted RBP9.85□□□□□ -0.83
SYNE1-203ENST00000354674 HTR1BP28222 390 aa9.85□□□□□ -0.83
SYNE1-203ENST00000354674 HNF1BP35680 557 aa9.85□□□□□ -0.83
SYNE1-203ENST00000354674 RECQLP46063 649 aaPredicted RBP9.85□□□□□ -0.83
SYNE1-203ENST00000354674 NCS1P62166 190 aa9.85□□□□□ -0.83
SYNE1-203ENST00000354674 EIF2B5Q13144 721 aaKnown RBP9.85□□□□□ -0.83
SYNE1-203ENST00000354674 PTPRRQ15256 657 aa9.85□□□□□ -0.83
SYNE1-203ENST00000354674 CCDC85BQ15834 202 aaPredicted RBP9.85□□□□□ -0.83
SYNE1-203ENST00000354674 LGSNQ5TDP6 509 aa9.85□□□□□ -0.83
SYNE1-203ENST00000354674 BRAT1Q6PJG6 821 aa9.85□□□□□ -0.83
SYNE1-203ENST00000354674 C16orf89Q6UX73 402 aa9.85□□□□□ -0.83
SYNE1-203ENST00000354674 Q7L0L9 218 aa9.85□□□□□ -0.83
SYNE1-203ENST00000354674 CMC1Q7Z7K0 106 aa9.85□□□□□ -0.83
SYNE1-203ENST00000354674 SPPL2CQ8IUH8 684 aa9.85□□□□□ -0.83
SYNE1-203ENST00000354674 TMIEQ8NEW7 156 aa9.85□□□□□ -0.83
SYNE1-203ENST00000354674 OR13C4Q8NGS5 318 aa9.85□□□□□ -0.83
SYNE1-203ENST00000354674 CSGALNACT1Q8TDX6 532 aa9.85□□□□□ -0.83
SYNE1-203ENST00000354674 DNASE1L2Q92874 299 aa9.85□□□□□ -0.83
SYNE1-203ENST00000354674 HLA-CQ95604 372 aa9.85□□□□□ -0.83
SYNE1-203ENST00000354674 HDAC10Q969S8 669 aa9.85□□□□□ -0.83
SYNE1-203ENST00000354674 VMP1Q96GC9 406 aa9.85□□□□□ -0.83
SYNE1-203ENST00000354674 CDKN2AIPNLQ96HQ2 116 aa9.85□□□□□ -0.83
SYNE1-203ENST00000354674 SORT1Q99523 831 aa9.85□□□□□ -0.83
SYNE1-203ENST00000354674 NTN4Q9HB63 628 aa9.85□□□□□ -0.83
SYNE1-203ENST00000354674 C14orf119Q9NWQ9 140 aa9.85□□□□□ -0.83
SYNE1-203ENST00000354674 IL17CQ9P0M4 197 aa9.85□□□□□ -0.83
SYNE1-203ENST00000354674 DNMT3AQ9Y6K1 912 aaPredicted RBP9.85□□□□□ -0.83
SYNE1-203ENST00000354674 TMEM233B4DJY2 109 aa9.85□□□□□ -0.83
SYNE1-203ENST00000354674 K7EQS6 105 aa9.85□□□□□ -0.83
SYNE1-203ENST00000354674 NPC1O15118 1278 aa9.85□□□□□ -0.83
SYNE1-203ENST00000354674 CYP7B1O75881 506 aa9.85□□□□□ -0.83
SYNE1-203ENST00000354674 RBP1P09455 135 aa9.85□□□□□ -0.83
SYNE1-203ENST00000354674 MAGEA12P43365 314 aa9.85□□□□□ -0.83
SYNE1-203ENST00000354674 LIMK2P53671 638 aa9.85□□□□□ -0.83
SYNE1-203ENST00000354674 CD83Q01151 205 aa9.85□□□□□ -0.83
SYNE1-203ENST00000354674 GNA13Q14344 377 aa9.85□□□□□ -0.83
SYNE1-203ENST00000354674 TBCELQ5QJ74 424 aa9.85□□□□□ -0.83
SYNE1-203ENST00000354674 STEAP3Q658P3 488 aa9.85□□□□□ -0.83
SYNE1-203ENST00000354674 SLC51BQ86UW2 128 aa9.85□□□□□ -0.83
SYNE1-203ENST00000354674 GTF2H4Q92759 462 aa9.85□□□□□ -0.83
SYNE1-203ENST00000354674 SLC45A3Q96JT2 553 aa9.85□□□□□ -0.83
SYNE1-203ENST00000354674 MUS81Q96NY9 551 aa9.85□□□□□ -0.83
SYNE1-203ENST00000354674 P2RY13Q9BPV8 354 aa9.85□□□□□ -0.83
SYNE1-203ENST00000354674 MTG2Q9H4K7 406 aa9.85□□□□□ -0.83
SYNE1-203ENST00000354674 MOV10Q9HCE1 1003 aaKnown RBP9.85□□□□□ -0.83
SYNE1-203ENST00000354674 SPATA6Q9NWH7 488 aaPredicted RBP9.85□□□□□ -0.83
SYNE1-203ENST00000354674 CCDC167Q9P0B6 97 aa9.85□□□□□ -0.83
SYNE1-203ENST00000354674 TRIOBPQ9H2D6 2365 aa9.85□□□□□ -0.83
SYNE1-203ENST00000354674 UNC80Q8N2C7 3258 aa9.84□□□□□ -0.83
SYNE1-203ENST00000354674 M0QX08 132 aa9.84□□□□□ -0.83
SYNE1-203ENST00000354674 RGS13O14921 159 aa9.84□□□□□ -0.83
SYNE1-203ENST00000354674 BCAS2O75934 225 aaPredicted RBP9.84□□□□□ -0.83
SYNE1-203ENST00000354674 AHSGP02765 367 aa9.84□□□□□ -0.83
SYNE1-203ENST00000354674 ALPIP09923 528 aa9.84□□□□□ -0.83
SYNE1-203ENST00000354674 RALBP11234 206 aa9.84□□□□□ -0.83
SYNE1-203ENST00000354674 CTRB1P17538 263 aa9.84□□□□□ -0.83
SYNE1-203ENST00000354674 KIR2DL1P43626 348 aaPredicted RBP9.84□□□□□ -0.83
SYNE1-203ENST00000354674 LEPRP48357 1165 aaKnown RBP9.84□□□□□ -0.83
SYNE1-203ENST00000354674 SOX9P48436 509 aa9.84□□□□□ -0.83
SYNE1-203ENST00000354674 SEMA3AQ14563 771 aa9.84□□□□□ -0.83
SYNE1-203ENST00000354674 PTPRCAPQ14761 206 aa9.84□□□□□ -0.83
SYNE1-203ENST00000354674 FNDC3BQ53EP0 1204 aaKnown RBP9.84□□□□□ -0.83
SYNE1-203ENST00000354674 CTRB2Q6GPI1 263 aa9.84□□□□□ -0.83
SYNE1-203ENST00000354674 NAPRTQ6XQN6 538 aa9.84□□□□□ -0.83
SYNE1-203ENST00000354674 NUDT18Q6ZVK8 323 aa9.84□□□□□ -0.83
SYNE1-203ENST00000354674 STRA8Q7Z7C7 330 aa9.84□□□□□ -0.83
SYNE1-203ENST00000354674 LINC00469Q8N7U9 141 aa9.84□□□□□ -0.83
SYNE1-203ENST00000354674 OR4K2Q8NGD2 314 aa9.84□□□□□ -0.83
SYNE1-203ENST00000354674 ZNF420Q8TAQ5 688 aaPredicted RBP9.84□□□□□ -0.83
SYNE1-203ENST00000354674 RPL3LQ92901 407 aaKnown RBP9.84□□□□□ -0.83
SYNE1-203ENST00000354674 FAM129BQ96TA1 746 aa9.84□□□□□ -0.83
SYNE1-203ENST00000354674 MKRN2Q9H000 416 aaKnown RBP9.84□□□□□ -0.83
SYNE1-203ENST00000354674 TK2O00142 265 aa9.84□□□□□ -0.83
SYNE1-203ENST00000354674 KLF11O14901 512 aa9.84□□□□□ -0.83
SYNE1-203ENST00000354674 POLR1CO15160 346 aaPredicted RBP9.84□□□□□ -0.83
SYNE1-203ENST00000354674 TRIM16O95361 564 aa9.84□□□□□ -0.83
SYNE1-203ENST00000354674 GOT2P00505 430 aaKnown RBP9.84□□□□□ -0.83
SYNE1-203ENST00000354674 GSNP06396 782 aa9.84□□□□□ -0.83
SYNE1-203ENST00000354674 CTPS1P17812 591 aa9.84□□□□□ -0.83
SYNE1-203ENST00000354674 CTHP32929 405 aa9.84□□□□□ -0.83
SYNE1-203ENST00000354674 SPRP35270 261 aaPredicted RBP9.84□□□□□ -0.83
SYNE1-203ENST00000354674 IL12RB1P42701 662 aa9.84□□□□□ -0.83
SYNE1-203ENST00000354674 SLC1A2P43004 574 aa9.84□□□□□ -0.83
SYNE1-203ENST00000354674 POLR2LP62875 67 aaKnown RBP9.84□□□□□ -0.83
SYNE1-203ENST00000354674 GRM7Q14831 915 aa9.84□□□□□ -0.83
SYNE1-203ENST00000354674 ZNF805Q5CZA5 627 aa9.84□□□□□ -0.83
SYNE1-203ENST00000354674 ARSIQ5FYB1 569 aa9.84□□□□□ -0.83
SYNE1-203ENST00000354674 TPRG1Q6ZUI0 275 aa9.84□□□□□ -0.83
SYNE1-203ENST00000354674 ZC3HC1Q86WB0 502 aaKnown RBP9.84□□□□□ -0.83
SYNE1-203ENST00000354674 CILP2Q8IUL8 1156 aa9.84□□□□□ -0.83
SYNE1-203ENST00000354674 SEPHS2Q99611 448 aa9.84□□□□□ -0.83
SYNE1-203ENST00000354674 C8orf33Q9H7E9 229 aaPredicted RBP9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms