RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 OR2AG2A6NM03 316 aa19.02■□□□□ 0.64
COL13A1-201ENST00000354547 SRCP12931 536 aa19.02■□□□□ 0.64
COL13A1-201ENST00000354547 TMBIM6P55061 237 aa19.02■□□□□ 0.64
COL13A1-201ENST00000354547 CASP9P55211 416 aa19.02■□□□□ 0.64
COL13A1-201ENST00000354547 ISL1P61371 349 aa19.02■□□□□ 0.64
COL13A1-201ENST00000354547 PHEXP78562 749 aa19.02■□□□□ 0.64
COL13A1-201ENST00000354547 CHIT1Q13231 466 aa19.02■□□□□ 0.64
COL13A1-201ENST00000354547 Q6ZNB5 142 aa19.02■□□□□ 0.64
COL13A1-201ENST00000354547 CYP2U1Q7Z449 544 aa19.02■□□□□ 0.64
COL13A1-201ENST00000354547 SMYD1Q8NB12 490 aa19.02■□□□□ 0.64
COL13A1-201ENST00000354547 DDHD1Q8NEL9 900 aa19.02■□□□□ 0.64
COL13A1-201ENST00000354547 RHNO1Q9BSD3 238 aa19.02■□□□□ 0.64
COL13A1-201ENST00000354547 REXO4Q9GZR2 422 aaKnown RBP19.02■□□□□ 0.64
COL13A1-201ENST00000354547 PSME2Q9UL46 239 aa19.02■□□□□ 0.64
COL13A1-201ENST00000354547 A0A096LPI6 279 aa19.02■□□□□ 0.63
COL13A1-201ENST00000354547 OR56A5P0C7T3 313 aa19.02■□□□□ 0.63
COL13A1-201ENST00000354547 IGFBP5P24593 272 aa19.02■□□□□ 0.63
COL13A1-201ENST00000354547 GSTM2P28161 218 aa19.02■□□□□ 0.63
COL13A1-201ENST00000354547 HTR1BP28222 390 aa19.02■□□□□ 0.63
COL13A1-201ENST00000354547 DGCR6Q14129 220 aa19.02■□□□□ 0.63
COL13A1-201ENST00000354547 TPRG1Q6ZUI0 275 aa19.02■□□□□ 0.63
COL13A1-201ENST00000354547 GAREM2Q75VX8 874 aa19.02■□□□□ 0.63
COL13A1-201ENST00000354547 CYP4Z1Q86W10 505 aa19.02■□□□□ 0.63
COL13A1-201ENST00000354547 SYT12Q8IV01 421 aa19.02■□□□□ 0.63
COL13A1-201ENST00000354547 UBTD2Q8WUN7 234 aa19.02■□□□□ 0.63
COL13A1-201ENST00000354547 RDH14Q9HBH5 336 aa19.02■□□□□ 0.63
COL13A1-201ENST00000354547 MYO7AQ13402 2215 aa19.02■□□□□ 0.63
COL13A1-201ENST00000354547 RECQL5O94762 991 aaPredicted RBP19.01■□□□□ 0.63
COL13A1-201ENST00000354547 RETP07949 1114 aa19.01■□□□□ 0.63
COL13A1-201ENST00000354547 HOXD10P28358 340 aa19.01■□□□□ 0.63
COL13A1-201ENST00000354547 AQP1P29972 269 aa19.01■□□□□ 0.63
COL13A1-201ENST00000354547 MAP2K4P45985 399 aa19.01■□□□□ 0.63
COL13A1-201ENST00000354547 GRSF1Q12849 480 aaKnown RBP eCLIP19.01■□□□□ 0.63
COL13A1-201ENST00000354547 AQP6Q13520 282 aa19.01■□□□□ 0.63
COL13A1-201ENST00000354547 TPGS2Q68CL5 300 aa19.01■□□□□ 0.63
COL13A1-201ENST00000354547 DPY19L3Q6ZPD9 716 aa19.01■□□□□ 0.63
COL13A1-201ENST00000354547 CLECL1Q8IZS7 167 aa19.01■□□□□ 0.63
COL13A1-201ENST00000354547 RAB2BQ8WUD1 216 aa19.01■□□□□ 0.63
COL13A1-201ENST00000354547 SLC29A3Q9BZD2 475 aa19.01■□□□□ 0.63
COL13A1-201ENST00000354547 SUV39H2Q9H5I1 410 aa19.01■□□□□ 0.63
COL13A1-201ENST00000354547 IL21Q9HBE4 155 aa19.01■□□□□ 0.63
COL13A1-201ENST00000354547 AASDHPPTQ9NRN7 309 aa19.01■□□□□ 0.63
COL13A1-201ENST00000354547 KIAA1522Q9P206 1035 aaPredicted RBP19.01■□□□□ 0.63
COL13A1-201ENST00000354547 BLOC1S6Q9UL45 172 aa19.01■□□□□ 0.63
COL13A1-201ENST00000354547 A0A1W2PRU2 124 aa19.01■□□□□ 0.63
COL13A1-201ENST00000354547 EVPLLA8MZ36 301 aa19.01■□□□□ 0.63
COL13A1-201ENST00000354547 FAM220BPB1ANY3 271 aa19.01■□□□□ 0.63
COL13A1-201ENST00000354547 BOLA2-SMG1P6H3BVE0 249 aa19.01■□□□□ 0.63
COL13A1-201ENST00000354547 SOCS5O75159 536 aa19.01■□□□□ 0.63
COL13A1-201ENST00000354547 ENGP17813 658 aa19.01■□□□□ 0.63
COL13A1-201ENST00000354547 NRIP1P48552 1158 aa19.01■□□□□ 0.63
COL13A1-201ENST00000354547 SNRPD1P62314 119 aaKnown RBP19.01■□□□□ 0.63
COL13A1-201ENST00000354547 ABRQ12979 859 aa19.01■□□□□ 0.63
COL13A1-201ENST00000354547 ITGADQ13349 1161 aa19.01■□□□□ 0.63
COL13A1-201ENST00000354547 NR1D2Q14995 579 aa19.01■□□□□ 0.63
COL13A1-201ENST00000354547 USP45Q70EL2 814 aa19.01■□□□□ 0.63
COL13A1-201ENST00000354547 CHST14Q8NCH0 376 aa19.01■□□□□ 0.63
COL13A1-201ENST00000354547 SCRN2Q96FV2 425 aa19.01■□□□□ 0.63
COL13A1-201ENST00000354547 TPD52L3Q96J77 140 aa19.01■□□□□ 0.63
COL13A1-201ENST00000354547 RAD21L1Q9H4I0 556 aa19.01■□□□□ 0.63
COL13A1-201ENST00000354547 FPGTO14772 594 aa19■□□□□ 0.63
COL13A1-201ENST00000354547 AOAHP28039 575 aa19■□□□□ 0.63
COL13A1-201ENST00000354547 EPHA2P29317 976 aa19■□□□□ 0.63
COL13A1-201ENST00000354547 KIR3DL1P43629 444 aa19■□□□□ 0.63
COL13A1-201ENST00000354547 CCR3P51677 355 aa19■□□□□ 0.63
COL13A1-201ENST00000354547 RAD23AP54725 363 aa19■□□□□ 0.63
COL13A1-201ENST00000354547 NOXRED1Q6NXP6 359 aa19■□□□□ 0.63
COL13A1-201ENST00000354547 Q6ZVU0 165 aa19■□□□□ 0.63
COL13A1-201ENST00000354547 PJA1Q8NG27 643 aa19■□□□□ 0.63
COL13A1-201ENST00000354547 RASSF1Q9NS23 344 aa19■□□□□ 0.63
COL13A1-201ENST00000354547 THG1LQ9NWX6 298 aaKnown RBP19■□□□□ 0.63
COL13A1-201ENST00000354547 TMEM9Q9P0T7 183 aa19■□□□□ 0.63
COL13A1-201ENST00000354547 ERVK-18Q9QC07 812 aa19■□□□□ 0.63
COL13A1-201ENST00000354547 B4GALT6Q9UBX8 382 aa19■□□□□ 0.63
COL13A1-201ENST00000354547 TMPRSS11EQ9UL52 423 aa19■□□□□ 0.63
COL13A1-201ENST00000354547 ANGPTL1O95841 491 aa19■□□□□ 0.63
COL13A1-201ENST00000354547 URODP06132 367 aa19■□□□□ 0.63
COL13A1-201ENST00000354547 JUNBP17275 347 aaPredicted RBP19■□□□□ 0.63
COL13A1-201ENST00000354547 PTPN6P29350 595 aa19■□□□□ 0.63
COL13A1-201ENST00000354547 GZMMP51124 257 aa19■□□□□ 0.63
COL13A1-201ENST00000354547 TSTA3Q13630 321 aaPredicted RBP19■□□□□ 0.63
COL13A1-201ENST00000354547 SMN1Q16637 294 aaKnown RBP19■□□□□ 0.63
COL13A1-201ENST00000354547 ADNP2Q6IQ32 1131 aa19■□□□□ 0.63
COL13A1-201ENST00000354547 Q6ZNX1 250 aa19■□□□□ 0.63
COL13A1-201ENST00000354547 CALHM3Q86XJ0 350 aa19■□□□□ 0.63
COL13A1-201ENST00000354547 UBE2FQ969M7 185 aa19■□□□□ 0.63
COL13A1-201ENST00000354547 MED8Q96G25 268 aa19■□□□□ 0.63
COL13A1-201ENST00000354547 CEP295NLQ96MC4 621 aa19■□□□□ 0.63
COL13A1-201ENST00000354547 GMEB1Q9Y692 573 aa19■□□□□ 0.63
COL13A1-201ENST00000354547 CLIC1O00299 241 aa19■□□□□ 0.63
COL13A1-201ENST00000354547 BCAS1O75363 584 aaPredicted RBP19■□□□□ 0.63
COL13A1-201ENST00000354547 NTRK1P04629 796 aa19■□□□□ 0.63
COL13A1-201ENST00000354547 HLA-FP30511 346 aa19■□□□□ 0.63
COL13A1-201ENST00000354547 CDK5R2Q13319 367 aa19■□□□□ 0.63
COL13A1-201ENST00000354547 CBX2Q14781 532 aaPredicted RBP19■□□□□ 0.63
COL13A1-201ENST00000354547 FRG2Q64ET8 278 aa19■□□□□ 0.63
COL13A1-201ENST00000354547 GTF2IRD2BQ6EKJ0 949 aa19■□□□□ 0.63
COL13A1-201ENST00000354547 GTF2IRD2Q86UP8 949 aa19■□□□□ 0.63
COL13A1-201ENST00000354547 MCOLN3Q8TDD5 553 aa19■□□□□ 0.63
COL13A1-201ENST00000354547 ELMO1Q92556 727 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms