RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 RBBP7Q16576 425 aa8.38□□□□□ -1.07
TRIM55-204ENST00000353317 CTSL3PQ5NE16 218 aa8.38□□□□□ -1.07
TRIM55-204ENST00000353317 EGFLAMQ63HQ2 1017 aa8.38□□□□□ -1.07
TRIM55-204ENST00000353317 STK32CQ86UX6 486 aa8.38□□□□□ -1.07
TRIM55-204ENST00000353317 SPARTQ8N0X7 666 aa8.38□□□□□ -1.07
TRIM55-204ENST00000353317 DPP10Q8N608 796 aa8.38□□□□□ -1.07
TRIM55-204ENST00000353317 FAM86B1Q8N7N1 296 aa8.38□□□□□ -1.07
TRIM55-204ENST00000353317 CDYL2Q8N8U2 506 aa8.38□□□□□ -1.07
TRIM55-204ENST00000353317 RAB2BQ8WUD1 216 aa8.38□□□□□ -1.07
TRIM55-204ENST00000353317 TRUB1Q8WWH5 349 aaKnown RBP8.38□□□□□ -1.07
TRIM55-204ENST00000353317 ELSPBP1Q96BH3 223 aa8.38□□□□□ -1.07
TRIM55-204ENST00000353317 LYSMD1Q96S90 227 aa8.38□□□□□ -1.07
TRIM55-204ENST00000353317 HEPHQ9BQS7 1158 aa8.38□□□□□ -1.07
TRIM55-204ENST00000353317 ACTL8Q9H568 366 aa8.38□□□□□ -1.07
TRIM55-204ENST00000353317 GPN2Q9H9Y4 310 aaPredicted RBP8.38□□□□□ -1.07
TRIM55-204ENST00000353317 CARS2Q9HA77 564 aaKnown RBP8.38□□□□□ -1.07
TRIM55-204ENST00000353317 RIC8BQ9NVN3 520 aa8.38□□□□□ -1.07
TRIM55-204ENST00000353317 CD84Q9UIB8 345 aa8.38□□□□□ -1.07
TRIM55-204ENST00000353317 MAGEL2Q9UJ55 1249 aa8.38□□□□□ -1.07
TRIM55-204ENST00000353317 PSME2Q9UL46 239 aa8.38□□□□□ -1.07
TRIM55-204ENST00000353317 NEUROG3Q9Y4Z2 214 aa8.38□□□□□ -1.07
TRIM55-204ENST00000353317 PRSS21Q9Y6M0 314 aa8.38□□□□□ -1.07
TRIM55-204ENST00000353317 COL4A2P08572 1712 aa8.38□□□□□ -1.07
TRIM55-204ENST00000353317 TRPM6Q9BX84 2022 aa8.38□□□□□ -1.07
TRIM55-204ENST00000353317 SYCE1LA8MT33 242 aa8.38□□□□□ -1.07
TRIM55-204ENST00000353317 E2F3O00716 465 aa8.38□□□□□ -1.07
TRIM55-204ENST00000353317 STX16O14662 325 aa8.38□□□□□ -1.07
TRIM55-204ENST00000353317 DEAF1O75398 565 aaPredicted RBP8.38□□□□□ -1.07
TRIM55-204ENST00000353317 SERPINB7O75635 380 aa8.38□□□□□ -1.07
TRIM55-204ENST00000353317 CLPXO76031 633 aa8.38□□□□□ -1.07
TRIM55-204ENST00000353317 MLYCDO95822 493 aa8.38□□□□□ -1.07
TRIM55-204ENST00000353317 TSPAN12O95859 305 aa8.38□□□□□ -1.07
TRIM55-204ENST00000353317 NPPAP01160 153 aa8.38□□□□□ -1.07
TRIM55-204ENST00000353317 HTR1AP08908 422 aa8.38□□□□□ -1.07
TRIM55-204ENST00000353317 RAP2AP10114 183 aa8.38□□□□□ -1.07
TRIM55-204ENST00000353317 NR4A1P22736 598 aa8.38□□□□□ -1.07
TRIM55-204ENST00000353317 PIGAP37287 484 aa8.38□□□□□ -1.07
TRIM55-204ENST00000353317 WASP42768 502 aa8.38□□□□□ -1.07
TRIM55-204ENST00000353317 MTHFRP42898 656 aa8.38□□□□□ -1.07
TRIM55-204ENST00000353317 BCAP31P51572 246 aa8.38□□□□□ -1.07
TRIM55-204ENST00000353317 PLIN5Q00G26 463 aa8.38□□□□□ -1.07
TRIM55-204ENST00000353317 PDGFRLQ15198 375 aa8.38□□□□□ -1.07
TRIM55-204ENST00000353317 CCDC85BQ15834 202 aaPredicted RBP8.38□□□□□ -1.07
TRIM55-204ENST00000353317 LRIT3Q3SXY7 679 aa8.38□□□□□ -1.07
TRIM55-204ENST00000353317 ZRANB3Q5FWF4 1079 aa8.38□□□□□ -1.07
TRIM55-204ENST00000353317 GRAMD4Q6IC98 578 aa8.38□□□□□ -1.07
TRIM55-204ENST00000353317 THAP5Q7Z6K1 395 aa8.38□□□□□ -1.07
TRIM55-204ENST00000353317 METTL3Q86U44 580 aaKnown RBP8.38□□□□□ -1.07
TRIM55-204ENST00000353317 HS3ST5Q8IZT8 346 aa8.38□□□□□ -1.07
TRIM55-204ENST00000353317 KIAA1958Q8N8K9 716 aa8.38□□□□□ -1.07
TRIM55-204ENST00000353317 SUSD6Q92537 303 aa8.38□□□□□ -1.07
TRIM55-204ENST00000353317 NEURL2Q9BR09 285 aa8.38□□□□□ -1.07
TRIM55-204ENST00000353317 TOR3AQ9H497 397 aa8.38□□□□□ -1.07
TRIM55-204ENST00000353317 PALMDQ9NP74 551 aa8.38□□□□□ -1.07
TRIM55-204ENST00000353317 PFDN4Q9NQP4 134 aa8.38□□□□□ -1.07
TRIM55-204ENST00000353317 INIPQ9NRY2 104 aa8.38□□□□□ -1.07
TRIM55-204ENST00000353317 EIF2B4Q9UI10 523 aaKnown RBP8.38□□□□□ -1.07
TRIM55-204ENST00000353317 GNPTGQ9UJJ9 305 aa8.38□□□□□ -1.07
TRIM55-204ENST00000353317 ERGIC3Q9Y282 383 aa8.38□□□□□ -1.07
TRIM55-204ENST00000353317 PLXNA2O75051 1894 aa8.38□□□□□ -1.07
TRIM55-204ENST00000353317 TBC1D3BA6NDS4 549 aa8.37□□□□□ -1.07
TRIM55-204ENST00000353317 TMEM221A6NGB7 291 aa8.37□□□□□ -1.07
TRIM55-204ENST00000353317 CFAP99D6REC4 459 aa8.37□□□□□ -1.07
TRIM55-204ENST00000353317 NOBOXO60393 691 aa8.37□□□□□ -1.07
TRIM55-204ENST00000353317 NIPSNAP2O75323 286 aa8.37□□□□□ -1.07
TRIM55-204ENST00000353317 KAT7O95251 611 aa8.37□□□□□ -1.07
TRIM55-204ENST00000353317 G6PDP11413 515 aa8.37□□□□□ -1.07
TRIM55-204ENST00000353317 NFKBIAP25963 317 aa8.37□□□□□ -1.07
TRIM55-204ENST00000353317 GSTM2P28161 218 aa8.37□□□□□ -1.07
TRIM55-204ENST00000353317 DGKQP52824 942 aa8.37□□□□□ -1.07
TRIM55-204ENST00000353317 ERVPABLB-1P60509 514 aa8.37□□□□□ -1.07
TRIM55-204ENST00000353317 KCNC4Q03721 635 aa8.37□□□□□ -1.07
TRIM55-204ENST00000353317 PIGFQ07326 219 aa8.37□□□□□ -1.07
TRIM55-204ENST00000353317 ILF2Q12905 390 aaKnown RBP8.37□□□□□ -1.07
TRIM55-204ENST00000353317 ITGADQ13349 1161 aa8.37□□□□□ -1.07
TRIM55-204ENST00000353317 AQP6Q13520 282 aa8.37□□□□□ -1.07
TRIM55-204ENST00000353317 HTR4Q13639 388 aa8.37□□□□□ -1.07
TRIM55-204ENST00000353317 TUBA3CQ13748 450 aa8.37□□□□□ -1.07
TRIM55-204ENST00000353317 CHRNA6Q15825 494 aa8.37□□□□□ -1.07
TRIM55-204ENST00000353317 IMPG1Q17R60 797 aa8.37□□□□□ -1.07
TRIM55-204ENST00000353317 DPY19L1Q2PZI1 675 aa8.37□□□□□ -1.07
TRIM55-204ENST00000353317 ATP6AP1LQ52LC2 224 aa8.37□□□□□ -1.07
TRIM55-204ENST00000353317 C2orf27AQ580R0 203 aa8.37□□□□□ -1.07
TRIM55-204ENST00000353317 ANKRD34AQ69YU3 496 aa8.37□□□□□ -1.07
TRIM55-204ENST00000353317 LETMD1Q6P1Q0 360 aa8.37□□□□□ -1.07
TRIM55-204ENST00000353317 AFTPHQ6ULP2 937 aa8.37□□□□□ -1.07
TRIM55-204ENST00000353317 TPRG1Q6ZUI0 275 aa8.37□□□□□ -1.07
TRIM55-204ENST00000353317 GPRIN3Q6ZVF9 776 aa8.37□□□□□ -1.07
TRIM55-204ENST00000353317 PARS2Q7L3T8 475 aaKnown RBP8.37□□□□□ -1.07
TRIM55-204ENST00000353317 HSD11B1LQ7Z5J1 315 aa8.37□□□□□ -1.07
TRIM55-204ENST00000353317 BTLAQ7Z6A9 289 aa8.37□□□□□ -1.07
TRIM55-204ENST00000353317 PLPP6Q8IY26 295 aa8.37□□□□□ -1.07
TRIM55-204ENST00000353317 CLDN19Q8N6F1 224 aa8.37□□□□□ -1.07
TRIM55-204ENST00000353317 SCAMP4Q969E2 229 aa8.37□□□□□ -1.07
TRIM55-204ENST00000353317 FKBP10Q96AY3 582 aa8.37□□□□□ -1.07
TRIM55-204ENST00000353317 ZNF641Q96N77 438 aaPredicted RBP8.37□□□□□ -1.07
TRIM55-204ENST00000353317 CGREF1Q99674 301 aa8.37□□□□□ -1.07
TRIM55-204ENST00000353317 AMBRA1Q9C0C7 1298 aa8.37□□□□□ -1.07
TRIM55-204ENST00000353317 CCDC68Q9H2F9 335 aa8.37□□□□□ -1.07
TRIM55-204ENST00000353317 SMURF2Q9HAU4 748 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms