RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 PRR23AA6NEV1 266 aa12.91□□□□□ -0.34
IFT88-202ENST00000351808 MUSKO15146 869 aa12.91□□□□□ -0.34
IFT88-202ENST00000351808 MSCO60682 206 aa12.91□□□□□ -0.34
IFT88-202ENST00000351808 VPS4BO75351 444 aa12.91□□□□□ -0.34
IFT88-202ENST00000351808 CREG1O75629 220 aa12.91□□□□□ -0.34
IFT88-202ENST00000351808 MT-CYBP00156 380 aaPredicted RBP12.91□□□□□ -0.34
IFT88-202ENST00000351808 RAF1P04049 648 aa12.91□□□□□ -0.34
IFT88-202ENST00000351808 ERVK-21P61565 698 aa12.91□□□□□ -0.34
IFT88-202ENST00000351808 PSPHP78330 225 aa12.91□□□□□ -0.34
IFT88-202ENST00000351808 PWP1Q13610 501 aa12.91□□□□□ -0.34
IFT88-202ENST00000351808 ZNF600Q6ZNG1 722 aa12.91□□□□□ -0.34
IFT88-202ENST00000351808 LDB1Q86U70 411 aaPredicted RBP12.91□□□□□ -0.34
IFT88-202ENST00000351808 ATG16L2Q8NAA4 619 aa12.91□□□□□ -0.34
IFT88-202ENST00000351808 NETO1Q8TDF5 533 aa12.91□□□□□ -0.34
IFT88-202ENST00000351808 SLC16A10Q8TF71 515 aa12.91□□□□□ -0.34
IFT88-202ENST00000351808 C12orf42Q96LP6 360 aa12.91□□□□□ -0.34
IFT88-202ENST00000351808 OPALINQ96PE5 141 aa12.91□□□□□ -0.34
IFT88-202ENST00000351808 OR5M11Q96RB7 305 aa12.91□□□□□ -0.34
IFT88-202ENST00000351808 WACQ9BTA9 647 aa12.91□□□□□ -0.34
IFT88-202ENST00000351808 OLA1Q9NTK5 396 aaKnown RBP12.91□□□□□ -0.34
IFT88-202ENST00000351808 RDH8Q9NYR8 311 aa12.91□□□□□ -0.34
IFT88-202ENST00000351808 NLKQ9UBE8 527 aa12.91□□□□□ -0.34
IFT88-202ENST00000351808 ABCG2Q9UNQ0 655 aa12.91□□□□□ -0.34
IFT88-202ENST00000351808 NOSIPQ9Y314 301 aaKnown RBP12.91□□□□□ -0.34
IFT88-202ENST00000351808 ACTL7AQ9Y615 435 aa12.91□□□□□ -0.34
IFT88-202ENST00000351808 YDJCA8MPS7 323 aa12.91□□□□□ -0.34
IFT88-202ENST00000351808 MLYCDO95822 493 aa12.91□□□□□ -0.34
IFT88-202ENST00000351808 ICAM1P05362 532 aa12.91□□□□□ -0.34
IFT88-202ENST00000351808 RRASP10301 218 aa12.91□□□□□ -0.34
IFT88-202ENST00000351808 HOXB1P14653 301 aaPredicted RBP12.91□□□□□ -0.34
IFT88-202ENST00000351808 EPHA5P54756 1037 aa12.91□□□□□ -0.34
IFT88-202ENST00000351808 NRG1Q02297 640 aaPredicted RBP12.91□□□□□ -0.34
IFT88-202ENST00000351808 GLYR1Q49A26 553 aaPredicted RBP12.91□□□□□ -0.34
IFT88-202ENST00000351808 SMYD5Q6GMV2 418 aa12.91□□□□□ -0.34
IFT88-202ENST00000351808 PHACTR4Q8IZ21 702 aa12.91□□□□□ -0.34
IFT88-202ENST00000351808 STX19Q8N4C7 294 aa12.91□□□□□ -0.34
IFT88-202ENST00000351808 IPMKQ8NFU5 416 aa12.91□□□□□ -0.34
IFT88-202ENST00000351808 NDRG1Q92597 394 aaKnown RBP12.91□□□□□ -0.34
IFT88-202ENST00000351808 SGTBQ96EQ0 304 aa12.91□□□□□ -0.34
IFT88-202ENST00000351808 KIF12Q96FN5 646 aa12.91□□□□□ -0.34
IFT88-202ENST00000351808 ZNF668Q96K58 619 aaPredicted RBP12.91□□□□□ -0.34
IFT88-202ENST00000351808 LINC00052Q96N35 136 aa12.91□□□□□ -0.34
IFT88-202ENST00000351808 FOPNLQ96NB1 174 aa12.91□□□□□ -0.34
IFT88-202ENST00000351808 ZIM2Q9NZV7 527 aa12.91□□□□□ -0.34
IFT88-202ENST00000351808 KIF17Q9P2E2 1029 aa12.91□□□□□ -0.34
IFT88-202ENST00000351808 PGAP2Q9UHJ9 254 aa12.91□□□□□ -0.34
IFT88-202ENST00000351808 MGAT4AQ9UM21 535 aa12.91□□□□□ -0.34
IFT88-202ENST00000351808 PTP4A3O75365 173 aa12.91□□□□□ -0.34
IFT88-202ENST00000351808 ERCC2P18074 760 aa12.91□□□□□ -0.34
IFT88-202ENST00000351808 HAAOP46952 286 aa12.91□□□□□ -0.34
IFT88-202ENST00000351808 CDKN2DP55273 166 aa12.91□□□□□ -0.34
IFT88-202ENST00000351808 NPRL3Q12980 569 aa12.91□□□□□ -0.34
IFT88-202ENST00000351808 ANGPT1Q15389 498 aa12.91□□□□□ -0.34
IFT88-202ENST00000351808 MED22Q15528 200 aa12.91□□□□□ -0.34
IFT88-202ENST00000351808 TUSC1Q2TAM9 212 aa12.91□□□□□ -0.34
IFT88-202ENST00000351808 GPR153Q6NV75 609 aa12.91□□□□□ -0.34
IFT88-202ENST00000351808 RAB44Q7Z6P3 723 aaPredicted RBP12.91□□□□□ -0.34
IFT88-202ENST00000351808 ACOT1Q86TX2 421 aa12.91□□□□□ -0.34
IFT88-202ENST00000351808 DNAJC22Q8N4W6 341 aa12.91□□□□□ -0.34
IFT88-202ENST00000351808 FANK1Q8TC84 345 aa12.91□□□□□ -0.34
IFT88-202ENST00000351808 SLC35F5Q8WV83 523 aa12.91□□□□□ -0.34
IFT88-202ENST00000351808 GPRASP2Q96D09 838 aa12.91□□□□□ -0.34
IFT88-202ENST00000351808 TEPSINQ96N21 525 aa12.91□□□□□ -0.34
IFT88-202ENST00000351808 MRPL45Q9BRJ2 306 aaKnown RBP12.91□□□□□ -0.34
IFT88-202ENST00000351808 HEXA-AS1Q9H8Q6 139 aa12.91□□□□□ -0.34
IFT88-202ENST00000351808 ABCB9Q9NP78 766 aa12.91□□□□□ -0.34
IFT88-202ENST00000351808 RCOR3Q9P2K3 495 aaPredicted RBP12.91□□□□□ -0.34
IFT88-202ENST00000351808 SPASTQ9UBP0 616 aa12.91□□□□□ -0.34
IFT88-202ENST00000351808 CSADQ9Y600 493 aa12.91□□□□□ -0.34
IFT88-202ENST00000351808 FABP12A6NFH5 140 aa12.9□□□□□ -0.34
IFT88-202ENST00000351808 CLCA1A8K7I4 914 aa12.9□□□□□ -0.34
IFT88-202ENST00000351808 FAM25EA8MYX2 175 aa12.9□□□□□ -0.34
IFT88-202ENST00000351808 FAM72CH0Y354 149 aa12.9□□□□□ -0.34
IFT88-202ENST00000351808 STX16O14662 325 aa12.9□□□□□ -0.34
IFT88-202ENST00000351808 VPS26AO75436 327 aa12.9□□□□□ -0.34
IFT88-202ENST00000351808 SCELO95171 688 aa12.9□□□□□ -0.34
IFT88-202ENST00000351808 CNPP09543 421 aaKnown RBP12.9□□□□□ -0.34
IFT88-202ENST00000351808 MAP2K3P46734 347 aa12.9□□□□□ -0.34
IFT88-202ENST00000351808 CLCNKAP51800 687 aa12.9□□□□□ -0.34
IFT88-202ENST00000351808 ERVFC1P60507 584 aa12.9□□□□□ -0.34
IFT88-202ENST00000351808 NFE2L1Q14494 772 aa12.9□□□□□ -0.34
IFT88-202ENST00000351808 KYAT1Q16773 422 aa12.9□□□□□ -0.34
IFT88-202ENST00000351808 PYDC2Q56P42 97 aa12.9□□□□□ -0.34
IFT88-202ENST00000351808 FAM72AQ5TYM5 149 aa12.9□□□□□ -0.34
IFT88-202ENST00000351808 GPR139Q6DWJ6 353 aa12.9□□□□□ -0.34
IFT88-202ENST00000351808 FAM72DQ6L9T8 149 aa12.9□□□□□ -0.34
IFT88-202ENST00000351808 FAM72BQ86X60 149 aa12.9□□□□□ -0.34
IFT88-202ENST00000351808 SLC44A2Q8IWA5 706 aaPredicted RBP12.9□□□□□ -0.34
IFT88-202ENST00000351808 BBS7Q8IWZ6 715 aa12.9□□□□□ -0.34
IFT88-202ENST00000351808 SLC37A3Q8NCC5 494 aa12.9□□□□□ -0.34
IFT88-202ENST00000351808 PPHLN1Q8NEY8 458 aaKnown RBP12.9□□□□□ -0.34
IFT88-202ENST00000351808 AP2M1Q96CW1 435 aa12.9□□□□□ -0.34
IFT88-202ENST00000351808 COL21A1Q96P44 957 aa12.9□□□□□ -0.34
IFT88-202ENST00000351808 SEC22CQ9BRL7 303 aa12.9□□□□□ -0.34
IFT88-202ENST00000351808 NT5C1AQ9BXI3 368 aa12.9□□□□□ -0.34
IFT88-202ENST00000351808 ATXN3LQ9H3M9 355 aa12.9□□□□□ -0.34
IFT88-202ENST00000351808 COPS3Q9UNS2 423 aa12.9□□□□□ -0.34
IFT88-202ENST00000351808 PCDHGA6Q9Y5G7 932 aa12.9□□□□□ -0.34
IFT88-202ENST00000351808 PCDH17O14917 1159 aa12.9□□□□□ -0.34
IFT88-202ENST00000351808 DCLK1O15075 740 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms