RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 PROKR1Q8TCW9 393 aa15.17■□□□□ 0.02
TSPAN4-201ENST00000346501 APOBEC4Q8WW27 367 aaKnown RBP15.17■□□□□ 0.02
TSPAN4-201ENST00000346501 ADNPQ9H2P0 1102 aa15.17■□□□□ 0.02
TSPAN4-201ENST00000346501 MRPS30Q9NP92 439 aaKnown RBP15.17■□□□□ 0.02
TSPAN4-201ENST00000346501 EURLQ9NYK6 297 aa15.17■□□□□ 0.02
TSPAN4-201ENST00000346501 SNX7Q9UNH6 387 aa15.17■□□□□ 0.02
TSPAN4-201ENST00000346501 VWA7Q9Y334 891 aa15.17■□□□□ 0.02
TSPAN4-201ENST00000346501 GFYI3L273 518 aa15.16■□□□□ 0.02
TSPAN4-201ENST00000346501 SLC16A5O15375 505 aa15.16■□□□□ 0.02
TSPAN4-201ENST00000346501 SRPX2O60687 465 aaPredicted RBP15.16■□□□□ 0.02
TSPAN4-201ENST00000346501 F7P08709 466 aaPredicted RBP15.16■□□□□ 0.02
TSPAN4-201ENST00000346501 GSTA2P09210 222 aa15.16■□□□□ 0.02
TSPAN4-201ENST00000346501 RAB40ALP0C0E4 278 aa15.16■□□□□ 0.02
TSPAN4-201ENST00000346501 PLTPP55058 493 aa15.16■□□□□ 0.02
TSPAN4-201ENST00000346501 MRPS25P82663 173 aaKnown RBP15.16■□□□□ 0.02
TSPAN4-201ENST00000346501 LY6DQ14210 128 aa15.16■□□□□ 0.02
TSPAN4-201ENST00000346501 GRM7Q14831 915 aa15.16■□□□□ 0.02
TSPAN4-201ENST00000346501 ZIC1Q15915 447 aa15.16■□□□□ 0.02
TSPAN4-201ENST00000346501 DEFB109BQ30KR1 87 aa15.16■□□□□ 0.02
TSPAN4-201ENST00000346501 FAM214AQ32MH5 1076 aa15.16■□□□□ 0.02
TSPAN4-201ENST00000346501 CCSMST1Q4G0I0 132 aa15.16■□□□□ 0.02
TSPAN4-201ENST00000346501 YOD1Q5VVQ6 348 aaPredicted RBP15.16■□□□□ 0.02
TSPAN4-201ENST00000346501 DUPD1Q68J44 220 aa15.16■□□□□ 0.02
TSPAN4-201ENST00000346501 FAM199XQ6PEV8 388 aaPredicted RBP15.16■□□□□ 0.02
TSPAN4-201ENST00000346501 CEP128Q6ZU80 1094 aa15.16■□□□□ 0.02
TSPAN4-201ENST00000346501 STRA8Q7Z7C7 330 aa15.16■□□□□ 0.02
TSPAN4-201ENST00000346501 ZNF655Q8N720 491 aaPredicted RBP15.16■□□□□ 0.02
TSPAN4-201ENST00000346501 OR2L3Q8NG85 312 aa15.16■□□□□ 0.02
TSPAN4-201ENST00000346501 GIMAP7Q8NHV1 300 aa15.16■□□□□ 0.02
TSPAN4-201ENST00000346501 CCDC138Q96M89 665 aa15.16■□□□□ 0.02
TSPAN4-201ENST00000346501 BBC3Q96PG8 261 aaPredicted RBP15.16■□□□□ 0.02
TSPAN4-201ENST00000346501 PKP4Q99569 1192 aa15.16■□□□□ 0.02
TSPAN4-201ENST00000346501 SLC30A3Q99726 388 aa15.16■□□□□ 0.02
TSPAN4-201ENST00000346501 SELENOSQ9BQE4 189 aa15.16■□□□□ 0.02
TSPAN4-201ENST00000346501 DHRS4Q9BTZ2 278 aa15.16■□□□□ 0.02
TSPAN4-201ENST00000346501 ACAT2Q9BWD1 397 aa15.16■□□□□ 0.02
TSPAN4-201ENST00000346501 CHST8Q9H2A9 424 aa15.16■□□□□ 0.02
TSPAN4-201ENST00000346501 ACTL8Q9H568 366 aa15.16■□□□□ 0.02
TSPAN4-201ENST00000346501 PCMTD2Q9NV79 361 aa15.16■□□□□ 0.02
TSPAN4-201ENST00000346501 ANKMY1Q9P2S6 941 aa15.16■□□□□ 0.02
TSPAN4-201ENST00000346501 NDOR1Q9UHB4 597 aa15.16■□□□□ 0.02
TSPAN4-201ENST00000346501 MRPS18BQ9Y676 258 aaKnown RBP15.16■□□□□ 0.02
TSPAN4-201ENST00000346501 CDC14CA4D256 554 aa15.15■□□□□ 0.02
TSPAN4-201ENST00000346501 SLC16A8O95907 504 aa15.15■□□□□ 0.02
TSPAN4-201ENST00000346501 ALAS2P22557 587 aa15.15■□□□□ 0.02
TSPAN4-201ENST00000346501 F8A1P23610 371 aa15.15■□□□□ 0.02
TSPAN4-201ENST00000346501 GRIA3P42263 894 aa15.15■□□□□ 0.02
TSPAN4-201ENST00000346501 ABATP80404 500 aa15.15■□□□□ 0.02
TSPAN4-201ENST00000346501 DCDP81605 110 aaKnown RBP15.15■□□□□ 0.02
TSPAN4-201ENST00000346501 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.15■□□□□ 0.02
TSPAN4-201ENST00000346501 RBM20Q5T481 1227 aaKnown RBP15.15■□□□□ 0.02
TSPAN4-201ENST00000346501 HECTD2Q5U5R9 776 aa15.15■□□□□ 0.02
TSPAN4-201ENST00000346501 PRAMEF17Q5VTA0 474 aa15.15■□□□□ 0.02
TSPAN4-201ENST00000346501 RHBDD2Q6NTF9 364 aa15.15■□□□□ 0.02
TSPAN4-201ENST00000346501 TRMT10BQ6PF06 316 aaKnown RBP15.15■□□□□ 0.02
TSPAN4-201ENST00000346501 PAQR3Q6TCH7 311 aa15.15■□□□□ 0.02
TSPAN4-201ENST00000346501 CAPN12Q6ZSI9 719 aa15.15■□□□□ 0.02
TSPAN4-201ENST00000346501 ZNF572Q7Z3I7 529 aaPredicted RBP15.15■□□□□ 0.02
TSPAN4-201ENST00000346501 PIWIL4Q7Z3Z4 852 aaKnown RBP15.15■□□□□ 0.02
TSPAN4-201ENST00000346501 CCDC25Q86WR0 208 aa15.15■□□□□ 0.02
TSPAN4-201ENST00000346501 FAM20CQ8IXL6 584 aa15.15■□□□□ 0.02
TSPAN4-201ENST00000346501 OR2A1Q8NGT9 310 aa15.15■□□□□ 0.02
TSPAN4-201ENST00000346501 EEF1AKMT1Q8WVE0 214 aa15.15■□□□□ 0.02
TSPAN4-201ENST00000346501 THAP4Q8WY91 577 aa15.15■□□□□ 0.02
TSPAN4-201ENST00000346501 LINGO1Q96FE5 620 aa15.15■□□□□ 0.02
TSPAN4-201ENST00000346501 NLNQ9BYT8 704 aa15.15■□□□□ 0.02
TSPAN4-201ENST00000346501 PHACTR1Q9C0D0 580 aa15.15■□□□□ 0.02
TSPAN4-201ENST00000346501 SPRTNQ9H040 489 aaPredicted RBP15.15■□□□□ 0.02
TSPAN4-201ENST00000346501 PCBD2Q9H0N5 130 aa15.15■□□□□ 0.02
TSPAN4-201ENST00000346501 PARVBQ9HBI1 364 aa15.15■□□□□ 0.02
TSPAN4-201ENST00000346501 ABCF3Q9NUQ8 709 aa15.15■□□□□ 0.02
TSPAN4-201ENST00000346501 IFT80Q9P2H3 777 aaPredicted RBP15.15■□□□□ 0.02
TSPAN4-201ENST00000346501 KLHL20Q9Y2M5 609 aa15.15■□□□□ 0.02
TSPAN4-201ENST00000346501 MED16Q9Y2X0 877 aa15.15■□□□□ 0.02
TSPAN4-201ENST00000346501 PRICKLE3O43900 615 aaPredicted RBP15.14■□□□□ 0.01
TSPAN4-201ENST00000346501 ERGP11308 486 aa15.14■□□□□ 0.01
TSPAN4-201ENST00000346501 SAT1P21673 171 aa15.14■□□□□ 0.01
TSPAN4-201ENST00000346501 CCND1P24385 295 aa15.14■□□□□ 0.01
TSPAN4-201ENST00000346501 HRH2P25021 359 aa15.14■□□□□ 0.01
TSPAN4-201ENST00000346501 PSMB5P28074 263 aa15.14■□□□□ 0.01
TSPAN4-201ENST00000346501 GABRB3P28472 473 aa15.14■□□□□ 0.01
TSPAN4-201ENST00000346501 RORAP35398 523 aa15.14■□□□□ 0.01
TSPAN4-201ENST00000346501 CDKN2DP55273 166 aa15.14■□□□□ 0.01
TSPAN4-201ENST00000346501 CBLBQ13191 982 aa15.14■□□□□ 0.01
TSPAN4-201ENST00000346501 FASTKD3Q14CZ7 662 aaKnown RBP15.14■□□□□ 0.01
TSPAN4-201ENST00000346501 PTCHD3Q3KNS1 767 aa15.14■□□□□ 0.01
TSPAN4-201ENST00000346501 SUSD1Q6UWL2 747 aa15.14■□□□□ 0.01
TSPAN4-201ENST00000346501 CYHR1Q6ZMK1 362 aa15.14■□□□□ 0.01
TSPAN4-201ENST00000346501 ADCK2Q7Z695 626 aa15.14■□□□□ 0.01
TSPAN4-201ENST00000346501 NKAPQ8N5F7 415 aaKnown RBP15.14■□□□□ 0.01
TSPAN4-201ENST00000346501 SLC38A9Q8NBW4 561 aa15.14■□□□□ 0.01
TSPAN4-201ENST00000346501 KIF18AQ8NI77 898 aa15.14■□□□□ 0.01
TSPAN4-201ENST00000346501 ATL1Q8WXF7 558 aa15.14■□□□□ 0.01
TSPAN4-201ENST00000346501 RERGQ96A58 199 aaPredicted RBP15.14■□□□□ 0.01
TSPAN4-201ENST00000346501 ZFYVE21Q9BQ24 234 aa15.14■□□□□ 0.01
TSPAN4-201ENST00000346501 DPH7Q9BTV6 452 aa15.14■□□□□ 0.01
TSPAN4-201ENST00000346501 CCDC177Q9NQR7 707 aaPredicted RBP15.14■□□□□ 0.01
TSPAN4-201ENST00000346501 MOCS1Q9NZB8 636 aa15.14■□□□□ 0.01
TSPAN4-201ENST00000346501 TAC3Q9UHF0 121 aa15.14■□□□□ 0.01
TSPAN4-201ENST00000346501 TUBD1Q9UJT1 453 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms