RNA–Protein interactions for RNA: ENST00000346416.6

CDK5RAP1-202, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP1, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-202ENST00000346416 MGAT4DA6NG13 374 aa13.69□□□□□ -0.22
CDK5RAP1-202ENST00000346416 TIPRLO75663 272 aa13.69□□□□□ -0.22
CDK5RAP1-202ENST00000346416 SMNDC1O75940 238 aaKnown RBP eCLIP13.69□□□□□ -0.22
CDK5RAP1-202ENST00000346416 PCDH8O95206 1070 aa13.69□□□□□ -0.22
CDK5RAP1-202ENST00000346416 NCK1P16333 377 aa13.69□□□□□ -0.22
CDK5RAP1-202ENST00000346416 AMD1P17707 334 aa13.69□□□□□ -0.22
CDK5RAP1-202ENST00000346416 SDC1P18827 310 aa13.69□□□□□ -0.22
CDK5RAP1-202ENST00000346416 HTR1EP28566 365 aa13.69□□□□□ -0.22
CDK5RAP1-202ENST00000346416 DLX2Q07687 328 aaPredicted RBP13.69□□□□□ -0.22
CDK5RAP1-202ENST00000346416 MED21Q13503 144 aa13.69□□□□□ -0.22
CDK5RAP1-202ENST00000346416 CAMK2GQ13555 558 aaPredicted RBP13.69□□□□□ -0.22
CDK5RAP1-202ENST00000346416 INPP5AQ14642 412 aa13.69□□□□□ -0.22
CDK5RAP1-202ENST00000346416 IRAK1BP1Q5VVH5 260 aa13.69□□□□□ -0.22
CDK5RAP1-202ENST00000346416 GRHL2Q6ISB3 625 aa13.69□□□□□ -0.22
CDK5RAP1-202ENST00000346416 PNCKQ6P2M8 343 aa13.69□□□□□ -0.22
CDK5RAP1-202ENST00000346416 DOK6Q6PKX4 331 aa13.69□□□□□ -0.22
CDK5RAP1-202ENST00000346416 ADAMTSL4Q6UY14 1074 aa13.69□□□□□ -0.22
CDK5RAP1-202ENST00000346416 HEATR4Q86WZ0 1026 aa13.69□□□□□ -0.22
CDK5RAP1-202ENST00000346416 SYTL1Q8IYJ3 562 aa13.69□□□□□ -0.22
CDK5RAP1-202ENST00000346416 EME1Q96AY2 570 aa13.69□□□□□ -0.22
CDK5RAP1-202ENST00000346416 PPWD1Q96BP3 646 aaKnown RBP13.69□□□□□ -0.22
CDK5RAP1-202ENST00000346416 OR52E6Q96RD3 313 aa13.69□□□□□ -0.22
CDK5RAP1-202ENST00000346416 S1PR5Q9H228 398 aa13.69□□□□□ -0.22
CDK5RAP1-202ENST00000346416 SERGEFQ9UGK8 458 aa13.69□□□□□ -0.22
CDK5RAP1-202ENST00000346416 AURKCQ9UQB9 309 aa13.69□□□□□ -0.22
CDK5RAP1-202ENST00000346416 CKAP5Q14008 2032 aa13.68□□□□□ -0.22
CDK5RAP1-202ENST00000346416 DOCK9Q9BZ29 2069 aa13.68□□□□□ -0.22
CDK5RAP1-202ENST00000346416 EYSQ5T1H1 3165 aa13.68□□□□□ -0.22
CDK5RAP1-202ENST00000346416 H0YIV9 168 aa13.68□□□□□ -0.22
CDK5RAP1-202ENST00000346416 DFNA5O60443 496 aa13.68□□□□□ -0.22
CDK5RAP1-202ENST00000346416 RNASEH1O60930 286 aaKnown RBP13.68□□□□□ -0.22
CDK5RAP1-202ENST00000346416 PCCBP05166 539 aa13.68□□□□□ -0.22
CDK5RAP1-202ENST00000346416 PSMA4P25789 261 aaKnown RBP13.68□□□□□ -0.22
CDK5RAP1-202ENST00000346416 MAPK1P28482 360 aa13.68□□□□□ -0.22
CDK5RAP1-202ENST00000346416 HNF4AP41235 474 aa13.68□□□□□ -0.22
CDK5RAP1-202ENST00000346416 GALK1P51570 392 aa13.68□□□□□ -0.22
CDK5RAP1-202ENST00000346416 CCR3P51677 355 aa13.68□□□□□ -0.22
CDK5RAP1-202ENST00000346416 SEC13P55735 322 aa13.68□□□□□ -0.22
CDK5RAP1-202ENST00000346416 PLOD1Q02809 727 aaPredicted RBP13.68□□□□□ -0.22
CDK5RAP1-202ENST00000346416 FOLH1Q04609 750 aa13.68□□□□□ -0.22
CDK5RAP1-202ENST00000346416 ZNF33BQ06732 778 aa13.68□□□□□ -0.22
CDK5RAP1-202ENST00000346416 PCDH1Q08174 1060 aa13.68□□□□□ -0.22
CDK5RAP1-202ENST00000346416 CSTF3Q12996 717 aaKnown RBP13.68□□□□□ -0.22
CDK5RAP1-202ENST00000346416 ADAM15Q13444 863 aa13.68□□□□□ -0.22
CDK5RAP1-202ENST00000346416 DDX39BQ13838 428 aaKnown RBP13.68□□□□□ -0.22
CDK5RAP1-202ENST00000346416 WSCD2Q2TBF2 565 aa13.68□□□□□ -0.22
CDK5RAP1-202ENST00000346416 C2orf27AQ580R0 203 aa13.68□□□□□ -0.22
CDK5RAP1-202ENST00000346416 TMEM154Q6P9G4 183 aa13.68□□□□□ -0.22
CDK5RAP1-202ENST00000346416 FAM83HQ6ZRV2 1179 aaPredicted RBP13.68□□□□□ -0.22
CDK5RAP1-202ENST00000346416 AMIGO2Q86SJ2 522 aa13.68□□□□□ -0.22
CDK5RAP1-202ENST00000346416 GOLM1Q8NBJ4 401 aa13.68□□□□□ -0.22
CDK5RAP1-202ENST00000346416 SPDYE1Q8NFV5 336 aaPredicted RBP13.68□□□□□ -0.22
CDK5RAP1-202ENST00000346416 OR8J3Q8NGG0 315 aa13.68□□□□□ -0.22
CDK5RAP1-202ENST00000346416 HM13Q8TCT9 377 aa13.68□□□□□ -0.22
CDK5RAP1-202ENST00000346416 DPEP2Q9H4A9 486 aa13.68□□□□□ -0.22
CDK5RAP1-202ENST00000346416 KCNE2Q9Y6J6 123 aa13.68□□□□□ -0.22
CDK5RAP1-202ENST00000346416 MAGEA13PA6NCF6 341 aa13.67□□□□□ -0.22
CDK5RAP1-202ENST00000346416 TXNDC9O14530 226 aa13.67□□□□□ -0.22
CDK5RAP1-202ENST00000346416 AKAP10O43572 662 aa13.67□□□□□ -0.22
CDK5RAP1-202ENST00000346416 AP1G1O43747 822 aa13.67□□□□□ -0.22
CDK5RAP1-202ENST00000346416 UBTFL6P0CB48 400 aaPredicted RBP13.67□□□□□ -0.22
CDK5RAP1-202ENST00000346416 OXTRP30559 389 aa13.67□□□□□ -0.22
CDK5RAP1-202ENST00000346416 TIE1P35590 1138 aa13.67□□□□□ -0.22
CDK5RAP1-202ENST00000346416 OR4D2P58180 307 aa13.67□□□□□ -0.22
CDK5RAP1-202ENST00000346416 TBPL1P62380 186 aa13.67□□□□□ -0.22
CDK5RAP1-202ENST00000346416 PHC1P78364 1004 aa13.67□□□□□ -0.22
CDK5RAP1-202ENST00000346416 CDK3Q00526 305 aa13.67□□□□□ -0.22
CDK5RAP1-202ENST00000346416 FXNQ16595 210 aa13.67□□□□□ -0.22
CDK5RAP1-202ENST00000346416 AASDHQ4L235 1098 aaPredicted RBP13.67□□□□□ -0.22
CDK5RAP1-202ENST00000346416 MTX3Q5HYI7 312 aa13.67□□□□□ -0.22
CDK5RAP1-202ENST00000346416 TBCELQ5QJ74 424 aa13.67□□□□□ -0.22
CDK5RAP1-202ENST00000346416 HMBOX1Q6NT76 420 aa13.67□□□□□ -0.22
CDK5RAP1-202ENST00000346416 NOXRED1Q6NXP6 359 aa13.67□□□□□ -0.22
CDK5RAP1-202ENST00000346416 FAM9CQ8IZT9 166 aa13.67□□□□□ -0.22
CDK5RAP1-202ENST00000346416 GALNT4Q8N4A0 578 aa13.67□□□□□ -0.22
CDK5RAP1-202ENST00000346416 HDDC3Q8N4P3 179 aa13.67□□□□□ -0.22
CDK5RAP1-202ENST00000346416 NEIL2Q969S2 332 aa13.67□□□□□ -0.22
CDK5RAP1-202ENST00000346416 EGLN2Q96KS0 407 aa13.67□□□□□ -0.22
CDK5RAP1-202ENST00000346416 LGR4Q9BXB1 951 aa13.67□□□□□ -0.22
CDK5RAP1-202ENST00000346416 VPS29Q9UBQ0 182 aa13.67□□□□□ -0.22
CDK5RAP1-202ENST00000346416 A0A1W2PP55 124 aa13.67□□□□□ -0.22
CDK5RAP1-202ENST00000346416 K7EQS6 105 aa13.67□□□□□ -0.22
CDK5RAP1-202ENST00000346416 ADH1BP00325 375 aa13.67□□□□□ -0.22
CDK5RAP1-202ENST00000346416 ACPPP15309 386 aa13.67□□□□□ -0.22
CDK5RAP1-202ENST00000346416 C5AR1P21730 350 aa13.67□□□□□ -0.22
CDK5RAP1-202ENST00000346416 IL10P22301 178 aa13.67□□□□□ -0.22
CDK5RAP1-202ENST00000346416 ACADLP28330 430 aa13.67□□□□□ -0.22
CDK5RAP1-202ENST00000346416 KIR2DL1P43626 348 aaPredicted RBP13.67□□□□□ -0.22
CDK5RAP1-202ENST00000346416 TSTA3Q13630 321 aaPredicted RBP13.67□□□□□ -0.22
CDK5RAP1-202ENST00000346416 STARD3Q14849 445 aa13.67□□□□□ -0.22
CDK5RAP1-202ENST00000346416 CYP51A1Q16850 503 aa13.67□□□□□ -0.22
CDK5RAP1-202ENST00000346416 CAPN13Q6MZZ7 669 aaPredicted RBP13.67□□□□□ -0.22
CDK5RAP1-202ENST00000346416 DNAJC14Q6Y2X3 702 aaPredicted RBP13.67□□□□□ -0.22
CDK5RAP1-202ENST00000346416 EP400NLQ6ZTU2 488 aa13.67□□□□□ -0.22
CDK5RAP1-202ENST00000346416 APLFQ8IW19 511 aaPredicted RBP13.67□□□□□ -0.22
CDK5RAP1-202ENST00000346416 ADGRG5Q8IZF4 528 aa13.67□□□□□ -0.22
CDK5RAP1-202ENST00000346416 LMNTD1Q8N9Z9 388 aa13.67□□□□□ -0.22
CDK5RAP1-202ENST00000346416 OR9A1PQ8NGU1 263 aa13.67□□□□□ -0.22
CDK5RAP1-202ENST00000346416 CSGALNACT1Q8TDX6 532 aa13.67□□□□□ -0.22
CDK5RAP1-202ENST00000346416 EZH1Q92800 747 aaPredicted RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms