RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 ECI2O75521 394 aa11.83□□□□□ -0.52
COL12A1-202ENST00000345356 IL1BP01584 269 aa11.83□□□□□ -0.52
COL12A1-202ENST00000345356 G6PDP11413 515 aa11.83□□□□□ -0.52
COL12A1-202ENST00000345356 EVI2BP34910 448 aa11.83□□□□□ -0.52
COL12A1-202ENST00000345356 EPHX2P34913 555 aa11.83□□□□□ -0.52
COL12A1-202ENST00000345356 ATP5C1P36542 298 aaKnown RBP11.83□□□□□ -0.52
COL12A1-202ENST00000345356 EIF2S3P41091 472 aaKnown RBP11.83□□□□□ -0.52
COL12A1-202ENST00000345356 ZNHIT3Q15649 155 aaPredicted RBP11.83□□□□□ -0.52
COL12A1-202ENST00000345356 DPY19L1Q2PZI1 675 aa11.83□□□□□ -0.52
COL12A1-202ENST00000345356 TCEAL4Q96EI5 215 aa11.83□□□□□ -0.52
COL12A1-202ENST00000345356 DNAJC27Q9NZQ0 273 aa11.83□□□□□ -0.52
COL12A1-202ENST00000345356 FZD4Q9ULV1 537 aa11.83□□□□□ -0.52
COL12A1-202ENST00000345356 OR51F1A6NGY5 319 aa11.83□□□□□ -0.52
COL12A1-202ENST00000345356 FGFBP1Q14512 234 aa11.83□□□□□ -0.52
COL12A1-202ENST00000345356 C9orf64Q5T6V5 341 aa11.83□□□□□ -0.52
COL12A1-202ENST00000345356 AQP11Q8NBQ7 271 aa11.83□□□□□ -0.52
COL12A1-202ENST00000345356 THAP6Q8TBB0 222 aa11.83□□□□□ -0.52
COL12A1-202ENST00000345356 GTF3C2Q8WUA4 911 aaPredicted RBP11.83□□□□□ -0.52
COL12A1-202ENST00000345356 GAL3ST3Q96A11 431 aa11.83□□□□□ -0.52
COL12A1-202ENST00000345356 MOCOSQ96EN8 888 aa11.83□□□□□ -0.52
COL12A1-202ENST00000345356 QPCTLQ9NXS2 382 aa11.83□□□□□ -0.52
COL12A1-202ENST00000345356 IGLV3-22A0A075B6J6 115 aa11.83□□□□□ -0.52
COL12A1-202ENST00000345356 SLC9A3R1O14745 358 aaPredicted RBP11.83□□□□□ -0.52
COL12A1-202ENST00000345356 NPPAP01160 153 aa11.83□□□□□ -0.52
COL12A1-202ENST00000345356 PCSK2P16519 638 aa11.83□□□□□ -0.52
COL12A1-202ENST00000345356 PVALBP20472 110 aaPredicted RBP11.83□□□□□ -0.52
COL12A1-202ENST00000345356 PPP3R1P63098 170 aa11.83□□□□□ -0.52
COL12A1-202ENST00000345356 S100A12P80511 92 aa11.83□□□□□ -0.52
COL12A1-202ENST00000345356 FAM171A1Q5VUB5 890 aa11.83□□□□□ -0.52
COL12A1-202ENST00000345356 PAQR3Q6TCH7 311 aa11.83□□□□□ -0.52
COL12A1-202ENST00000345356 GJD3Q8N144 294 aa11.83□□□□□ -0.52
COL12A1-202ENST00000345356 GRIN3AQ8TCU5 1115 aa11.83□□□□□ -0.52
COL12A1-202ENST00000345356 ZNF516Q92618 1163 aa11.83□□□□□ -0.52
COL12A1-202ENST00000345356 RNF31Q96EP0 1072 aa11.83□□□□□ -0.52
COL12A1-202ENST00000345356 IFT27Q9BW83 186 aa11.83□□□□□ -0.52
COL12A1-202ENST00000345356 C3orf14Q9HBI5 128 aa11.83□□□□□ -0.52
COL12A1-202ENST00000345356 GALPQ9UBC7 116 aa11.83□□□□□ -0.52
COL12A1-202ENST00000345356 MYH8P13535 1937 aa11.83□□□□□ -0.52
COL12A1-202ENST00000345356 E7ESA3 106 aa11.83□□□□□ -0.52
COL12A1-202ENST00000345356 LGALS2P05162 132 aa11.83□□□□□ -0.52
COL12A1-202ENST00000345356 CACNG1Q06432 222 aa11.83□□□□□ -0.52
COL12A1-202ENST00000345356 OLIG2Q13516 323 aa11.83□□□□□ -0.52
COL12A1-202ENST00000345356 VMACQ2NL98 169 aa11.83□□□□□ -0.52
COL12A1-202ENST00000345356 ZNF311Q5JNZ3 666 aa11.83□□□□□ -0.52
COL12A1-202ENST00000345356 CLEC12AQ5QGZ9 265 aa11.83□□□□□ -0.52
COL12A1-202ENST00000345356 C9orf57Q5W0N0 161 aa11.83□□□□□ -0.52
COL12A1-202ENST00000345356 DCP2Q8IU60 420 aaKnown RBP11.83□□□□□ -0.52
COL12A1-202ENST00000345356 FAM109AQ8N4B1 249 aa11.83□□□□□ -0.52
COL12A1-202ENST00000345356 CHPT1Q8WUD6 406 aa11.83□□□□□ -0.52
COL12A1-202ENST00000345356 ZNF471Q9BX82 626 aaPredicted RBP11.83□□□□□ -0.52
COL12A1-202ENST00000345356 THG1LQ9NWX6 298 aaKnown RBP11.83□□□□□ -0.52
COL12A1-202ENST00000345356 PRORSD1PA6NEY8 169 aa11.82□□□□□ -0.52
COL12A1-202ENST00000345356 M0R2N6 131 aa11.82□□□□□ -0.52
COL12A1-202ENST00000345356 GABRDO14764 452 aa11.82□□□□□ -0.52
COL12A1-202ENST00000345356 SMAD9O15198 467 aaKnown RBP11.82□□□□□ -0.52
COL12A1-202ENST00000345356 HK1P19367 917 aa11.82□□□□□ -0.52
COL12A1-202ENST00000345356 IVDP26440 423 aa11.82□□□□□ -0.52
COL12A1-202ENST00000345356 ASPAP45381 313 aa11.82□□□□□ -0.52
COL12A1-202ENST00000345356 MAPK8P45983 427 aa11.82□□□□□ -0.52
COL12A1-202ENST00000345356 TMEM132BQ14DG7 1078 aa11.82□□□□□ -0.52
COL12A1-202ENST00000345356 TOR1AIP1Q5JTV8 583 aa11.82□□□□□ -0.52
COL12A1-202ENST00000345356 Q6ZNX1 250 aa11.82□□□□□ -0.52
COL12A1-202ENST00000345356 RTL4Q6ZR62 310 aa11.82□□□□□ -0.52
COL12A1-202ENST00000345356 PLCZ1Q86YW0 608 aa11.82□□□□□ -0.52
COL12A1-202ENST00000345356 TXNDC5Q8NBS9 432 aaKnown RBP11.82□□□□□ -0.52
COL12A1-202ENST00000345356 LRRC15Q8TF66 581 aa11.82□□□□□ -0.52
COL12A1-202ENST00000345356 CNDP2Q96KP4 475 aaKnown RBP11.82□□□□□ -0.52
COL12A1-202ENST00000345356 MGAT4AQ9UM21 535 aa11.82□□□□□ -0.52
COL12A1-202ENST00000345356 SPATA31A6Q5VVP1 1343 aa11.82□□□□□ -0.52
COL12A1-202ENST00000345356 LOC100509620A0A075B734 347 aa11.82□□□□□ -0.52
COL12A1-202ENST00000345356 ZNF10P21506 573 aaPredicted RBP11.82□□□□□ -0.52
COL12A1-202ENST00000345356 DNAJB1P25685 340 aa11.82□□□□□ -0.52
COL12A1-202ENST00000345356 GRM5P41594 1212 aa11.82□□□□□ -0.52
COL12A1-202ENST00000345356 ARCN1P48444 511 aaKnown RBP11.82□□□□□ -0.52
COL12A1-202ENST00000345356 OR4F3Q6IEY1 312 aa11.82□□□□□ -0.52
COL12A1-202ENST00000345356 DENND1CQ8IV53 801 aa11.82□□□□□ -0.52
COL12A1-202ENST00000345356 EXOSC8Q96B26 276 aaKnown RBP11.82□□□□□ -0.52
COL12A1-202ENST00000345356 NANSQ9NR45 359 aa11.82□□□□□ -0.52
COL12A1-202ENST00000345356 NLKQ9UBE8 527 aa11.82□□□□□ -0.52
COL12A1-202ENST00000345356 FAM198AQ9UFP1 575 aa11.82□□□□□ -0.52
COL12A1-202ENST00000345356 CLCA1A8K7I4 914 aa11.82□□□□□ -0.52
COL12A1-202ENST00000345356 CAPN14A8MX76 684 aa11.82□□□□□ -0.52
COL12A1-202ENST00000345356 TLX2O43763 284 aaPredicted RBP11.82□□□□□ -0.52
COL12A1-202ENST00000345356 SCNN1GP51170 649 aa11.82□□□□□ -0.52
COL12A1-202ENST00000345356 PGDP52209 483 aa11.82□□□□□ -0.52
COL12A1-202ENST00000345356 ZNF132P52740 706 aa11.82□□□□□ -0.52
COL12A1-202ENST00000345356 DIO3P55073 304 aa11.82□□□□□ -0.52
COL12A1-202ENST00000345356 GRK1Q15835 563 aa11.82□□□□□ -0.52
COL12A1-202ENST00000345356 CAPN13Q6MZZ7 669 aaPredicted RBP11.82□□□□□ -0.52
COL12A1-202ENST00000345356 PIM3Q86V86 326 aa11.82□□□□□ -0.52
COL12A1-202ENST00000345356 PAQR7Q86WK9 346 aa11.82□□□□□ -0.52
COL12A1-202ENST00000345356 GPALPP1Q8IXQ4 340 aa11.82□□□□□ -0.52
COL12A1-202ENST00000345356 ADAMTS15Q8TE58 950 aa11.82□□□□□ -0.52
COL12A1-202ENST00000345356 AP2M1Q96CW1 435 aa11.82□□□□□ -0.52
COL12A1-202ENST00000345356 PKP4Q99569 1192 aa11.82□□□□□ -0.52
COL12A1-202ENST00000345356 BCL7BQ9BQE9 202 aa11.82□□□□□ -0.52
COL12A1-202ENST00000345356 FLRT1Q9NZU1 646 aa11.82□□□□□ -0.52
COL12A1-202ENST00000345356 ENPP5Q9UJA9 477 aa11.82□□□□□ -0.52
COL12A1-202ENST00000345356 SLC35F4A4IF30 521 aa11.82□□□□□ -0.52
COL12A1-202ENST00000345356 SIX1Q15475 284 aaPredicted RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms