RNA–Protein interactions for RNA: ENST00000345005.8

CLK3-201, Transcript of CDC like kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK3, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-201ENST00000345005 TCN1P20061 433 aaPredicted RBP12.48□□□□□ -0.41
CLK3-201ENST00000345005 DRD1P21728 446 aa12.48□□□□□ -0.41
CLK3-201ENST00000345005 PSMA4P25789 261 aaKnown RBP12.48□□□□□ -0.41
CLK3-201ENST00000345005 PRDX3P30048 256 aaKnown RBP12.48□□□□□ -0.41
CLK3-201ENST00000345005 CCR3P51677 355 aa12.48□□□□□ -0.41
CLK3-201ENST00000345005 TAS2R38P59533 333 aa12.48□□□□□ -0.41
CLK3-201ENST00000345005 RPS14P62263 151 aaKnown RBP12.48□□□□□ -0.41
CLK3-201ENST00000345005 PRKCQQ04759 706 aa12.48□□□□□ -0.41
CLK3-201ENST00000345005 GK3PQ14409 553 aa12.48□□□□□ -0.41
CLK3-201ENST00000345005 ZNF829Q3KNS6 432 aaPredicted RBP12.48□□□□□ -0.41
CLK3-201ENST00000345005 SLC44A4Q53GD3 710 aa12.48□□□□□ -0.41
CLK3-201ENST00000345005 C2orf27AQ580R0 203 aa12.48□□□□□ -0.41
CLK3-201ENST00000345005 TMTC4Q5T4D3 741 aa12.48□□□□□ -0.41
CLK3-201ENST00000345005 KLHL35Q6PF15 583 aa12.48□□□□□ -0.41
CLK3-201ENST00000345005 ADAMTSL4Q6UY14 1074 aa12.48□□□□□ -0.41
CLK3-201ENST00000345005 GK5Q6ZS86 529 aa12.48□□□□□ -0.41
CLK3-201ENST00000345005 GPR180Q86V85 440 aa12.48□□□□□ -0.41
CLK3-201ENST00000345005 MINDY1Q8N5J2 469 aa12.48□□□□□ -0.41
CLK3-201ENST00000345005 DNASE1L2Q92874 299 aa12.48□□□□□ -0.41
CLK3-201ENST00000345005 SLC35B4Q969S0 331 aa12.48□□□□□ -0.41
CLK3-201ENST00000345005 CENPNQ96H22 339 aaPredicted RBP12.48□□□□□ -0.41
CLK3-201ENST00000345005 C3orf30Q96M34 536 aa12.48□□□□□ -0.41
CLK3-201ENST00000345005 OR2AG1Q9H205 316 aa12.48□□□□□ -0.41
CLK3-201ENST00000345005 TUBB1Q9H4B7 451 aa12.48□□□□□ -0.41
CLK3-201ENST00000345005 AKTIPQ9H8T0 292 aa12.48□□□□□ -0.41
CLK3-201ENST00000345005 PCDHGB4Q9UN71 923 aa12.48□□□□□ -0.41
CLK3-201ENST00000345005 TIMM22Q9Y584 194 aa12.48□□□□□ -0.41
CLK3-201ENST00000345005 PCDHGB5Q9Y5G0 923 aa12.48□□□□□ -0.41
CLK3-201ENST00000345005 SLC5A10A0PJK1 596 aa12.47□□□□□ -0.41
CLK3-201ENST00000345005 GRXCR2A6NFK2 248 aa12.47□□□□□ -0.41
CLK3-201ENST00000345005 IGLON5A6NGN9 336 aa12.47□□□□□ -0.41
CLK3-201ENST00000345005 OR7A17O14581 309 aa12.47□□□□□ -0.41
CLK3-201ENST00000345005 AKAP10O43572 662 aa12.47□□□□□ -0.41
CLK3-201ENST00000345005 LINC00032P0C843 101 aa12.47□□□□□ -0.41
CLK3-201ENST00000345005 EPB42P16452 691 aa12.47□□□□□ -0.41
CLK3-201ENST00000345005 MSX2P35548 267 aaPredicted RBP12.47□□□□□ -0.41
CLK3-201ENST00000345005 ARL1P40616 181 aaPredicted RBP12.47□□□□□ -0.41
CLK3-201ENST00000345005 ERVPABLB-1P60509 514 aa12.47□□□□□ -0.41
CLK3-201ENST00000345005 GRSF1Q12849 480 aaKnown RBP eCLIP12.47□□□□□ -0.41
CLK3-201ENST00000345005 AGERQ15109 404 aa12.47□□□□□ -0.41
CLK3-201ENST00000345005 PON2Q15165 354 aa12.47□□□□□ -0.41
CLK3-201ENST00000345005 AASDHQ4L235 1098 aaPredicted RBP12.47□□□□□ -0.41
CLK3-201ENST00000345005 PDCD4Q53EL6 469 aaKnown RBP12.47□□□□□ -0.41
CLK3-201ENST00000345005 TMEM196Q5HYL7 178 aa12.47□□□□□ -0.41
CLK3-201ENST00000345005 PAOXQ6QHF9 649 aa12.47□□□□□ -0.41
CLK3-201ENST00000345005 FKBP9P1Q75LS8 142 aa12.47□□□□□ -0.41
CLK3-201ENST00000345005 MILR1Q7Z6M3 343 aa12.47□□□□□ -0.41
CLK3-201ENST00000345005 RASGRP3Q8IV61 690 aa12.47□□□□□ -0.41
CLK3-201ENST00000345005 OR52B6Q8NGF0 335 aa12.47□□□□□ -0.41
CLK3-201ENST00000345005 METTL6Q8TCB7 284 aa12.47□□□□□ -0.41
CLK3-201ENST00000345005 ABTB1Q969K4 478 aaPredicted RBP12.47□□□□□ -0.41
CLK3-201ENST00000345005 SLCO4A1Q96BD0 722 aa12.47□□□□□ -0.41
CLK3-201ENST00000345005 ISOC1Q96CN7 298 aa12.47□□□□□ -0.41
CLK3-201ENST00000345005 MARK4Q96L34 752 aa12.47□□□□□ -0.41
CLK3-201ENST00000345005 FOPNLQ96NB1 174 aa12.47□□□□□ -0.41
CLK3-201ENST00000345005 DOK1Q99704 481 aa12.47□□□□□ -0.41
CLK3-201ENST00000345005 NTMT1Q9BV86 223 aa12.47□□□□□ -0.41
CLK3-201ENST00000345005 SLC32A1Q9H598 525 aa12.47□□□□□ -0.41
CLK3-201ENST00000345005 TMEM45AQ9NWC5 275 aa12.47□□□□□ -0.41
CLK3-201ENST00000345005 RHBDL2Q9NX52 303 aa12.47□□□□□ -0.41
CLK3-201ENST00000345005 GPR34Q9UPC5 381 aa12.47□□□□□ -0.41
CLK3-201ENST00000345005 PIAS3Q9Y6X2 628 aa12.47□□□□□ -0.41
CLK3-201ENST00000345005 C17orf113A0A1B0GUU1 675 aa12.46□□□□□ -0.41
CLK3-201ENST00000345005 ATP6AP2A0A1C7CYW4 349 aa12.46□□□□□ -0.41
CLK3-201ENST00000345005 A0A1W2PP55 124 aa12.46□□□□□ -0.41
CLK3-201ENST00000345005 PRORSD1PA6NEY8 169 aa12.46□□□□□ -0.41
CLK3-201ENST00000345005 C2CD4DB7Z1M9 353 aa12.46□□□□□ -0.41
CLK3-201ENST00000345005 H3BQ06 376 aaPredicted RBP12.46□□□□□ -0.41
CLK3-201ENST00000345005 KATNA1O75449 491 aa12.46□□□□□ -0.41
CLK3-201ENST00000345005 PSIP1O75475 530 aaKnown RBP12.46□□□□□ -0.41
CLK3-201ENST00000345005 ATP6AP2O75787 350 aa12.46□□□□□ -0.41
CLK3-201ENST00000345005 EGFP01133 1207 aa12.46□□□□□ -0.41
CLK3-201ENST00000345005 PORP16435 677 aaPredicted RBP12.46□□□□□ -0.41
CLK3-201ENST00000345005 LBPP18428 481 aa12.46□□□□□ -0.41
CLK3-201ENST00000345005 MAP4P27816 1152 aaKnown RBP12.46□□□□□ -0.41
CLK3-201ENST00000345005 MRPS21P82921 87 aaKnown RBP12.46□□□□□ -0.41
CLK3-201ENST00000345005 PLOD1Q02809 727 aaPredicted RBP12.46□□□□□ -0.41
CLK3-201ENST00000345005 MERTKQ12866 999 aa12.46□□□□□ -0.41
CLK3-201ENST00000345005 GRIK2Q13002 908 aa12.46□□□□□ -0.41
CLK3-201ENST00000345005 MTX3Q5HYI7 312 aa12.46□□□□□ -0.41
CLK3-201ENST00000345005 LETMD1Q6P1Q0 360 aa12.46□□□□□ -0.41
CLK3-201ENST00000345005 PNCKQ6P2M8 343 aa12.46□□□□□ -0.41
CLK3-201ENST00000345005 ABRAXAS1Q6UWZ7 409 aa12.46□□□□□ -0.41
CLK3-201ENST00000345005 SPATA19Q7Z5L4 167 aa12.46□□□□□ -0.41
CLK3-201ENST00000345005 SLC22A15Q8IZD6 547 aa12.46□□□□□ -0.41
CLK3-201ENST00000345005 SLC44A3Q8N4M1 653 aa12.46□□□□□ -0.41
CLK3-201ENST00000345005 CDYL2Q8N8U2 506 aa12.46□□□□□ -0.41
CLK3-201ENST00000345005 FAM47BQ8NA70 645 aa12.46□□□□□ -0.41
CLK3-201ENST00000345005 IL17RCQ8NAC3 791 aa12.46□□□□□ -0.41
CLK3-201ENST00000345005 OR4F6Q8NGB9 312 aa12.46□□□□□ -0.41
CLK3-201ENST00000345005 GANCQ8TET4 914 aa12.46□□□□□ -0.41
CLK3-201ENST00000345005 TUBGCP3Q96CW5 907 aa12.46□□□□□ -0.41
CLK3-201ENST00000345005 THAP11Q96EK4 314 aa12.46□□□□□ -0.41
CLK3-201ENST00000345005 COX4I2Q96KJ9 171 aa12.46□□□□□ -0.41
CLK3-201ENST00000345005 SEMA6AQ9H2E6 1030 aa12.46□□□□□ -0.41
CLK3-201ENST00000345005 KCNK12Q9HB15 430 aa12.46□□□□□ -0.41
CLK3-201ENST00000345005 RIC8BQ9NVN3 520 aa12.46□□□□□ -0.41
CLK3-201ENST00000345005 ACTR3BQ9P1U1 418 aa12.46□□□□□ -0.41
CLK3-201ENST00000345005 ABCD2Q9UBJ2 740 aa12.46□□□□□ -0.41
CLK3-201ENST00000345005 BTRCQ9Y297 605 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms