RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 URADA6NGE7 173 aa17.66■□□□□ 0.42
SMC4-201ENST00000344722 SRPRAP08240 638 aaKnown RBP17.66■□□□□ 0.42
SMC4-201ENST00000344722 MAP2K3P46734 347 aa17.66■□□□□ 0.42
SMC4-201ENST00000344722 SGCGQ13326 291 aa17.66■□□□□ 0.42
SMC4-201ENST00000344722 AGMOQ6ZNB7 445 aa17.66■□□□□ 0.42
SMC4-201ENST00000344722 SLC7A5P1Q8MH63 180 aa17.66■□□□□ 0.42
SMC4-201ENST00000344722 SRFBP1Q8NEF9 429 aaKnown RBP17.66■□□□□ 0.42
SMC4-201ENST00000344722 VMP1Q96GC9 406 aa17.66■□□□□ 0.42
SMC4-201ENST00000344722 MYRFLQ96LU7 910 aa17.66■□□□□ 0.42
SMC4-201ENST00000344722 DERL2Q9GZP9 239 aa17.66■□□□□ 0.42
SMC4-201ENST00000344722 GALPQ9UBC7 116 aa17.66■□□□□ 0.42
SMC4-201ENST00000344722 SLC1A7O00341 560 aa17.66■□□□□ 0.42
SMC4-201ENST00000344722 HLA-DQB2P05538 268 aa17.66■□□□□ 0.42
SMC4-201ENST00000344722 HMGCS1Q01581 520 aa17.66■□□□□ 0.42
SMC4-201ENST00000344722 CRB2Q5IJ48 1285 aa17.66■□□□□ 0.42
SMC4-201ENST00000344722 RAET1GQ6H3X3 334 aa17.66■□□□□ 0.42
SMC4-201ENST00000344722 CES5AQ6NT32 575 aa17.66■□□□□ 0.42
SMC4-201ENST00000344722 FRRS1Q6ZNA5 592 aa17.66■□□□□ 0.42
SMC4-201ENST00000344722 RTL4Q6ZR62 310 aa17.66■□□□□ 0.42
SMC4-201ENST00000344722 PTF1AQ7RTS3 328 aa17.66■□□□□ 0.42
SMC4-201ENST00000344722 PGBD3Q8N328 593 aa17.66■□□□□ 0.42
SMC4-201ENST00000344722 CLEC4DQ8WXI8 215 aa17.66■□□□□ 0.42
SMC4-201ENST00000344722 SMG7Q92540 1137 aaKnown RBP17.66■□□□□ 0.42
SMC4-201ENST00000344722 HSD17B1P14061 328 aa17.66■□□□□ 0.42
SMC4-201ENST00000344722 TACR2P21452 398 aa17.66■□□□□ 0.42
SMC4-201ENST00000344722 ETV4P43268 484 aa17.66■□□□□ 0.42
SMC4-201ENST00000344722 PPP3R1P63098 170 aa17.66■□□□□ 0.42
SMC4-201ENST00000344722 FAM171BQ6P995 826 aa17.66■□□□□ 0.42
SMC4-201ENST00000344722 LINC00471Q8N535 108 aa17.66■□□□□ 0.42
SMC4-201ENST00000344722 PSMG2Q969U7 264 aa17.66■□□□□ 0.42
SMC4-201ENST00000344722 PPP1R16AQ96I34 528 aa17.66■□□□□ 0.42
SMC4-201ENST00000344722 TNKS2Q9H2K2 1166 aa17.66■□□□□ 0.42
SMC4-201ENST00000344722 CCSER2Q9H7U1 834 aa17.66■□□□□ 0.42
SMC4-201ENST00000344722 CAPN15O75808 1086 aa17.66■□□□□ 0.42
SMC4-201ENST00000344722 CPN2P22792 545 aa17.66■□□□□ 0.42
SMC4-201ENST00000344722 FAM46DQ8NEK8 389 aa17.66■□□□□ 0.42
SMC4-201ENST00000344722 PEBP4Q96S96 227 aa17.66■□□□□ 0.42
SMC4-201ENST00000344722 BMXP51813 675 aa17.65■□□□□ 0.42
SMC4-201ENST00000344722 AP2S1P53680 142 aaPredicted RBP17.65■□□□□ 0.42
SMC4-201ENST00000344722 HNRNPA0Q13151 305 aaKnown RBP17.65■□□□□ 0.42
SMC4-201ENST00000344722 TCEA2Q15560 299 aa17.65■□□□□ 0.42
SMC4-201ENST00000344722 COQ5Q5HYK3 327 aa17.65■□□□□ 0.42
SMC4-201ENST00000344722 NCEH1Q6PIU2 408 aa17.65■□□□□ 0.42
SMC4-201ENST00000344722 JAZF1Q86VZ6 243 aa17.65■□□□□ 0.42
SMC4-201ENST00000344722 ZNF597Q96LX8 424 aa17.65■□□□□ 0.42
SMC4-201ENST00000344722 MIR1-1HGQ9H1L0 117 aa17.65■□□□□ 0.42
SMC4-201ENST00000344722 SLC2A6Q9UGQ3 507 aa17.65■□□□□ 0.42
SMC4-201ENST00000344722 ATPIF1Q9UII2 106 aa17.65■□□□□ 0.42
SMC4-201ENST00000344722 IKZF2Q9UKS7 526 aa17.65■□□□□ 0.42
SMC4-201ENST00000344722 ASF1AQ9Y294 204 aa17.65■□□□□ 0.42
SMC4-201ENST00000344722 OR51F1A6NGY5 319 aa17.65■□□□□ 0.42
SMC4-201ENST00000344722 ATG13O75143 517 aa17.65■□□□□ 0.42
SMC4-201ENST00000344722 RGS1Q08116 209 aa17.65■□□□□ 0.42
SMC4-201ENST00000344722 SLC10A6Q3KNW5 377 aa17.65■□□□□ 0.42
SMC4-201ENST00000344722 SLC39A4Q6P5W5 647 aa17.65■□□□□ 0.42
SMC4-201ENST00000344722 KIF18BQ86Y91 864 aa17.65■□□□□ 0.42
SMC4-201ENST00000344722 CMTR2Q8IYT2 770 aaKnown RBP17.65■□□□□ 0.42
SMC4-201ENST00000344722 LRCH3Q96II8 777 aa17.65■□□□□ 0.42
SMC4-201ENST00000344722 KIF1AQ12756 1690 aa17.65■□□□□ 0.42
SMC4-201ENST00000344722 EEDO75530 441 aaKnown RBP17.65■□□□□ 0.42
SMC4-201ENST00000344722 EFNA1P20827 205 aaPredicted RBP17.65■□□□□ 0.42
SMC4-201ENST00000344722 STEAP4Q687X5 459 aa17.65■□□□□ 0.42
SMC4-201ENST00000344722 GPALPP1Q8IXQ4 340 aa17.65■□□□□ 0.42
SMC4-201ENST00000344722 TSEN15Q8WW01 171 aaKnown RBP17.65■□□□□ 0.42
SMC4-201ENST00000344722 KIAA1191Q96A73 305 aa17.65■□□□□ 0.42
SMC4-201ENST00000344722 FZD8Q9H461 694 aa17.65■□□□□ 0.42
SMC4-201ENST00000344722 PCDHGB1Q9Y5G3 927 aa17.65■□□□□ 0.42
SMC4-201ENST00000344722 ALG5Q9Y673 324 aa17.65■□□□□ 0.42
SMC4-201ENST00000344722 FXYD6-FXYD2A0A087WZ82 144 aa17.65■□□□□ 0.42
SMC4-201ENST00000344722 HMGN1P05114 100 aa17.65■□□□□ 0.42
SMC4-201ENST00000344722 ANXA3P12429 323 aa17.65■□□□□ 0.42
SMC4-201ENST00000344722 TCEA1P23193 301 aaKnown RBP17.65■□□□□ 0.42
SMC4-201ENST00000344722 PIK3CBP42338 1070 aa17.65■□□□□ 0.42
SMC4-201ENST00000344722 ARHGDIBP52566 201 aa17.65■□□□□ 0.42
SMC4-201ENST00000344722 OR4F3Q6IEY1 312 aa17.65■□□□□ 0.42
SMC4-201ENST00000344722 ZNF384Q8TF68 577 aa17.65■□□□□ 0.42
SMC4-201ENST00000344722 CAMK1GQ96NX5 476 aa17.65■□□□□ 0.42
SMC4-201ENST00000344722 FXYD6Q9H0Q3 95 aa17.65■□□□□ 0.42
SMC4-201ENST00000344722 MARK1Q9P0L2 795 aa17.65■□□□□ 0.42
SMC4-201ENST00000344722 ZNF541Q9H0D2 1346 aa17.64■□□□□ 0.42
SMC4-201ENST00000344722 UPK1BO75841 260 aa17.64■□□□□ 0.42
SMC4-201ENST00000344722 LAMP2P13473 410 aa17.64■□□□□ 0.42
SMC4-201ENST00000344722 F8A1P23610 371 aa17.64■□□□□ 0.42
SMC4-201ENST00000344722 ST3GAL4Q11206 333 aa17.64■□□□□ 0.42
SMC4-201ENST00000344722 TMEM17Q86X19 198 aa17.64■□□□□ 0.42
SMC4-201ENST00000344722 INO80EQ8NBZ0 244 aaPredicted RBP17.64■□□□□ 0.42
SMC4-201ENST00000344722 LPPQ93052 612 aa17.64■□□□□ 0.42
SMC4-201ENST00000344722 CNDP2Q96KP4 475 aaKnown RBP17.64■□□□□ 0.42
SMC4-201ENST00000344722 FUZQ9BT04 418 aa17.64■□□□□ 0.42
SMC4-201ENST00000344722 ENAMQ9NRM1 1142 aa17.64■□□□□ 0.42
SMC4-201ENST00000344722 FARSBQ9NSD9 589 aaKnown RBP17.64■□□□□ 0.42
SMC4-201ENST00000344722 MTMR10Q9NXD2 777 aa17.64■□□□□ 0.42
SMC4-201ENST00000344722 YJEFN3A6XGL0 299 aa17.64■□□□□ 0.41
SMC4-201ENST00000344722 SMSP52788 366 aa17.64■□□□□ 0.41
SMC4-201ENST00000344722 EXOSC8Q96B26 276 aaKnown RBP17.64■□□□□ 0.41
SMC4-201ENST00000344722 POPDC3Q9HBV1 291 aa17.64■□□□□ 0.41
SMC4-201ENST00000344722 MS4A12Q9NXJ0 267 aa17.64■□□□□ 0.41
SMC4-201ENST00000344722 ANKMY1Q9P2S6 941 aa17.64■□□□□ 0.41
SMC4-201ENST00000344722 ZNF214Q9UL59 606 aaPredicted RBP17.64■□□□□ 0.41
SMC4-201ENST00000344722 PRORSD1PA6NEY8 169 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms