RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 OR52E8Q6IFG1 317 aa7.01□□□□□ -1.29
VCAN-202ENST00000342785 FAM92BQ6ZTR7 304 aa7.01□□□□□ -1.29
VCAN-202ENST00000342785 CMTR2Q8IYT2 770 aaKnown RBP7.01□□□□□ -1.29
VCAN-202ENST00000342785 GOLM1Q8NBJ4 401 aa7.01□□□□□ -1.29
VCAN-202ENST00000342785 PYURFQ96I23 114 aa7.01□□□□□ -1.29
VCAN-202ENST00000342785 TREX1Q9NSU2 369 aa7.01□□□□□ -1.29
VCAN-202ENST00000342785 CNOT11Q9UKZ1 510 aaKnown RBP7.01□□□□□ -1.29
VCAN-202ENST00000342785 SLC27A6Q9Y2P4 619 aa7.01□□□□□ -1.29
VCAN-202ENST00000342785 TMED5Q9Y3A6 229 aa7.01□□□□□ -1.29
VCAN-202ENST00000342785 INSL5Q9Y5Q6 135 aa7.01□□□□□ -1.29
VCAN-202ENST00000342785 A0A0G2JN53 185 aa7.01□□□□□ -1.29
VCAN-202ENST00000342785 K7ERQ8 282 aa7.01□□□□□ -1.29
VCAN-202ENST00000342785 CACNB4O00305 520 aaPredicted RBP7.01□□□□□ -1.29
VCAN-202ENST00000342785 SLC22A1O15245 554 aa7.01□□□□□ -1.29
VCAN-202ENST00000342785 ABCB7O75027 752 aa7.01□□□□□ -1.29
VCAN-202ENST00000342785 FGF4P08620 206 aa7.01□□□□□ -1.29
VCAN-202ENST00000342785 RGS8P57771 180 aaPredicted RBP7.01□□□□□ -1.29
VCAN-202ENST00000342785 RAB15P59190 212 aa7.01□□□□□ -1.29
VCAN-202ENST00000342785 ANGPT1Q15389 498 aa7.01□□□□□ -1.29
VCAN-202ENST00000342785 DUOXA1Q1HG43 343 aa7.01□□□□□ -1.29
VCAN-202ENST00000342785 ZNF829Q3KNS6 432 aaPredicted RBP7.01□□□□□ -1.29
VCAN-202ENST00000342785 COQ5Q5HYK3 327 aa7.01□□□□□ -1.29
VCAN-202ENST00000342785 MZT2BQ6NZ67 158 aa7.01□□□□□ -1.29
VCAN-202ENST00000342785 PLET1Q6UQ28 207 aa7.01□□□□□ -1.29
VCAN-202ENST00000342785 FGD2Q7Z6J4 655 aa7.01□□□□□ -1.29
VCAN-202ENST00000342785 IGSF21Q96ID5 467 aa7.01□□□□□ -1.29
VCAN-202ENST00000342785 CMTM6Q9NX76 183 aa7.01□□□□□ -1.29
VCAN-202ENST00000342785 PCTPQ9UKL6 214 aa7.01□□□□□ -1.29
VCAN-202ENST00000342785 PEX16Q9Y5Y5 336 aa7.01□□□□□ -1.29
VCAN-202ENST00000342785 NAV1Q8NEY1 1877 aa7.01□□□□□ -1.29
VCAN-202ENST00000342785 TBC1D3DA0A087WVF3 549 aa7.01□□□□□ -1.29
VCAN-202ENST00000342785 TBC1D3IA0A087WXS9 549 aa7.01□□□□□ -1.29
VCAN-202ENST00000342785 TBC1D3EA0A087X179 549 aa7.01□□□□□ -1.29
VCAN-202ENST00000342785 TBC1D3KA0A087X1G2 549 aa7.01□□□□□ -1.29
VCAN-202ENST00000342785 TBC1D3FA6NER0 549 aaPredicted RBP7.01□□□□□ -1.29
VCAN-202ENST00000342785 SAGE2PA6NJ88 616 aa7.01□□□□□ -1.29
VCAN-202ENST00000342785 TBC1D3LB9A6J9 549 aa7.01□□□□□ -1.29
VCAN-202ENST00000342785 CASKO14936 926 aa7.01□□□□□ -1.29
VCAN-202ENST00000342785 TBC1D3HP0C7X1 549 aa7.01□□□□□ -1.29
VCAN-202ENST00000342785 FOXA1P55317 472 aa7.01□□□□□ -1.29
VCAN-202ENST00000342785 RAB41Q5JT25 222 aa7.01□□□□□ -1.29
VCAN-202ENST00000342785 C6orf141Q5SZD1 244 aa7.01□□□□□ -1.29
VCAN-202ENST00000342785 TBC1D3GQ6DHY5 549 aa7.01□□□□□ -1.29
VCAN-202ENST00000342785 TBC1D3CQ6IPX1 549 aa7.01□□□□□ -1.29
VCAN-202ENST00000342785 LCN8Q6JVE9 175 aa7.01□□□□□ -1.29
VCAN-202ENST00000342785 NEK5Q6P3R8 708 aa7.01□□□□□ -1.29
VCAN-202ENST00000342785 CLEC14AQ86T13 490 aa7.01□□□□□ -1.29
VCAN-202ENST00000342785 PIANPQ8IYJ0 282 aa7.01□□□□□ -1.29
VCAN-202ENST00000342785 TBC1D3Q8IZP1 549 aaPredicted RBP7.01□□□□□ -1.29
VCAN-202ENST00000342785 ANKFN1Q8N957 763 aa7.01□□□□□ -1.29
VCAN-202ENST00000342785 PHC3Q8NDX5 983 aa7.01□□□□□ -1.29
VCAN-202ENST00000342785 OR8J3Q8NGG0 315 aa7.01□□□□□ -1.29
VCAN-202ENST00000342785 FCGR1BQ92637 280 aa7.01□□□□□ -1.29
VCAN-202ENST00000342785 HSH2DQ96JZ2 352 aa7.01□□□□□ -1.29
VCAN-202ENST00000342785 IL4I1Q96RQ9 567 aa7.01□□□□□ -1.29
VCAN-202ENST00000342785 SPRTNQ9H040 489 aaPredicted RBP7.01□□□□□ -1.29
VCAN-202ENST00000342785 FAM120CQ9NX05 1096 aaKnown RBP7.01□□□□□ -1.29
VCAN-202ENST00000342785 USP3Q9Y6I4 520 aa7.01□□□□□ -1.29
VCAN-202ENST00000342785 TRBV23OR9-2A0A075B6M9 112 aa7□□□□□ -1.29
VCAN-202ENST00000342785 EFCAB9A8MZ26 197 aa7□□□□□ -1.29
VCAN-202ENST00000342785 LDB2O43679 373 aa7□□□□□ -1.29
VCAN-202ENST00000342785 NME6O75414 186 aaPredicted RBP7□□□□□ -1.29
VCAN-202ENST00000342785 SNX4O95219 450 aa7□□□□□ -1.29
VCAN-202ENST00000342785 PTX3P26022 381 aaPredicted RBP7□□□□□ -1.29
VCAN-202ENST00000342785 HTR1BP28222 390 aa7□□□□□ -1.29
VCAN-202ENST00000342785 TAS2R41P59536 307 aa7□□□□□ -1.29
VCAN-202ENST00000342785 KLHL12Q53G59 568 aa7□□□□□ -1.29
VCAN-202ENST00000342785 ARSIQ5FYB1 569 aa7□□□□□ -1.29
VCAN-202ENST00000342785 OR5AK3PQ8NH89 298 aa7□□□□□ -1.29
VCAN-202ENST00000342785 IPCEF1Q8WWN9 437 aaPredicted RBP7□□□□□ -1.29
VCAN-202ENST00000342785 NT5C3BQ969T7 300 aa7□□□□□ -1.29
VCAN-202ENST00000342785 ISOC1Q96CN7 298 aa7□□□□□ -1.29
VCAN-202ENST00000342785 SEZ6LQ9BYH1 1024 aa7□□□□□ -1.29
VCAN-202ENST00000342785 ZNF780BQ9Y6R6 833 aa7□□□□□ -1.29
VCAN-202ENST00000342785 MYO7AQ13402 2215 aa7□□□□□ -1.29
VCAN-202ENST00000342785 PSMD11O00231 422 aa7□□□□□ -1.29
VCAN-202ENST00000342785 MATN4O95460 622 aa7□□□□□ -1.29
VCAN-202ENST00000342785 FGF19O95750 216 aa7□□□□□ -1.29
VCAN-202ENST00000342785 CBSLP0DN79 551 aa7□□□□□ -1.29
VCAN-202ENST00000342785 CBSP35520 551 aa7□□□□□ -1.29
VCAN-202ENST00000342785 SRP54P61011 504 aaKnown RBP7□□□□□ -1.29
VCAN-202ENST00000342785 MVKQ03426 396 aa7□□□□□ -1.29
VCAN-202ENST00000342785 COX10Q12887 443 aa7□□□□□ -1.29
VCAN-202ENST00000342785 GANABQ14697 944 aaKnown RBP7□□□□□ -1.29
VCAN-202ENST00000342785 ABRAXAS2Q15018 415 aa7□□□□□ -1.29
VCAN-202ENST00000342785 PYDC2Q56P42 97 aa7□□□□□ -1.29
VCAN-202ENST00000342785 MZT2AQ6P582 158 aa7□□□□□ -1.29
VCAN-202ENST00000342785 KIAA1324Q6UXG2 1013 aaKnown RBP7□□□□□ -1.29
VCAN-202ENST00000342785 THOC6Q86W42 341 aaKnown RBP7□□□□□ -1.29
VCAN-202ENST00000342785 COLGALT2Q8IYK4 626 aa7□□□□□ -1.29
VCAN-202ENST00000342785 KRTCAP2Q8N6L1 136 aa7□□□□□ -1.29
VCAN-202ENST00000342785 ARRDC2Q8TBH0 407 aa7□□□□□ -1.29
VCAN-202ENST00000342785 TAMM41Q96BW9 452 aa7□□□□□ -1.29
VCAN-202ENST00000342785 ZNF347Q96SE7 839 aa7□□□□□ -1.29
VCAN-202ENST00000342785 ARHGAP39Q9C0H5 1083 aa7□□□□□ -1.29
VCAN-202ENST00000342785 OR51B5Q9H339 312 aa7□□□□□ -1.29
VCAN-202ENST00000342785 PRDM8Q9NQV8 689 aa7□□□□□ -1.29
VCAN-202ENST00000342785 THUMPD1Q9NXG2 353 aaKnown RBP7□□□□□ -1.29
VCAN-202ENST00000342785 TRPS1Q9UHF7 1281 aa7□□□□□ -1.29
VCAN-202ENST00000342785 SLCO3A1Q9UIG8 710 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms