RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 CTSL3PQ5NE16 218 aa18.31■□□□□ 0.52
PSPC1-201ENST00000338910 UBE2Q1Q7Z7E8 422 aa18.31■□□□□ 0.52
PSPC1-201ENST00000338910 LYSMD2Q8IV50 215 aa18.31■□□□□ 0.52
PSPC1-201ENST00000338910 MRPL43Q8N983 215 aaKnown RBP18.31■□□□□ 0.52
PSPC1-201ENST00000338910 POF1BQ8WVV4 589 aa18.31■□□□□ 0.52
PSPC1-201ENST00000338910 HTRA1Q92743 480 aa18.31■□□□□ 0.52
PSPC1-201ENST00000338910 MYO19Q96H55 970 aa18.31■□□□□ 0.52
PSPC1-201ENST00000338910 NDEL1Q9GZM8 345 aa18.31■□□□□ 0.52
PSPC1-201ENST00000338910 DERL2Q9GZP9 239 aa18.31■□□□□ 0.52
PSPC1-201ENST00000338910 TRIT1Q9H3H1 467 aaKnown RBP18.31■□□□□ 0.52
PSPC1-201ENST00000338910 GORASP2Q9H8Y8 452 aa18.31■□□□□ 0.52
PSPC1-201ENST00000338910 MOV10Q9HCE1 1003 aaKnown RBP18.31■□□□□ 0.52
PSPC1-201ENST00000338910 ASAH2Q9NR71 780 aa18.31■□□□□ 0.52
PSPC1-201ENST00000338910 ZNF225Q9UK10 706 aa18.31■□□□□ 0.52
PSPC1-201ENST00000338910 TESMINQ9Y4I5 508 aa18.31■□□□□ 0.52
PSPC1-201ENST00000338910 NEUROG3Q9Y4Z2 214 aa18.31■□□□□ 0.52
PSPC1-201ENST00000338910 PCDHGA10Q9Y5H3 936 aa18.31■□□□□ 0.52
PSPC1-201ENST00000338910 IRAK3Q9Y616 596 aa18.31■□□□□ 0.52
PSPC1-201ENST00000338910 NCF1BA6NI72 391 aaPredicted RBP18.3■□□□□ 0.52
PSPC1-201ENST00000338910 SYCE1LA8MT33 242 aa18.3■□□□□ 0.52
PSPC1-201ENST00000338910 NCF1CA8MVU1 366 aaPredicted RBP18.3■□□□□ 0.52
PSPC1-201ENST00000338910 LEFTY2O00292 366 aa18.3■□□□□ 0.52
PSPC1-201ENST00000338910 SLC16A6O15403 523 aa18.3■□□□□ 0.52
PSPC1-201ENST00000338910 RPS17P08708 135 aaKnown RBP18.3■□□□□ 0.52
PSPC1-201ENST00000338910 NCF1P14598 390 aaPredicted RBP18.3■□□□□ 0.52
PSPC1-201ENST00000338910 NKX2-5P52952 324 aaPredicted RBP18.3■□□□□ 0.52
PSPC1-201ENST00000338910 PHC1P78364 1004 aa18.3■□□□□ 0.52
PSPC1-201ENST00000338910 MPPE1Q53F39 396 aa18.3■□□□□ 0.52
PSPC1-201ENST00000338910 SYT6Q5T7P8 510 aaPredicted RBP18.3■□□□□ 0.52
PSPC1-201ENST00000338910 ANKS6Q68DC2 871 aa18.3■□□□□ 0.52
PSPC1-201ENST00000338910 SCIMPQ6UWF3 145 aa18.3■□□□□ 0.52
PSPC1-201ENST00000338910 SYVN1Q86TM6 617 aa18.3■□□□□ 0.52
PSPC1-201ENST00000338910 CMTM8Q8IZV2 173 aa18.3■□□□□ 0.52
PSPC1-201ENST00000338910 FBXO30Q8TB52 745 aa18.3■□□□□ 0.52
PSPC1-201ENST00000338910 ZNF486Q96H40 463 aaPredicted RBP18.3■□□□□ 0.52
PSPC1-201ENST00000338910 REXO5Q96IC2 774 aaKnown RBP18.3■□□□□ 0.52
PSPC1-201ENST00000338910 ZNF583Q96ND8 569 aa18.3■□□□□ 0.52
PSPC1-201ENST00000338910 DACH2Q96NX9 599 aa18.3■□□□□ 0.52
PSPC1-201ENST00000338910 ASPSCR1Q9BZE9 553 aa18.3■□□□□ 0.52
PSPC1-201ENST00000338910 ERVK-18Q9QC07 812 aa18.3■□□□□ 0.52
PSPC1-201ENST00000338910 UTS2RQ9UKP6 389 aa18.3■□□□□ 0.52
PSPC1-201ENST00000338910 PRRC2BQ5JSZ5 2229 aaKnown RBP18.3■□□□□ 0.52
PSPC1-201ENST00000338910 BTN3A1O00481 513 aa18.3■□□□□ 0.52
PSPC1-201ENST00000338910 BNIP3LO60238 219 aa18.3■□□□□ 0.52
PSPC1-201ENST00000338910 HS6ST1O60243 411 aa18.3■□□□□ 0.52
PSPC1-201ENST00000338910 VPS26AO75436 327 aa18.3■□□□□ 0.52
PSPC1-201ENST00000338910 HMGCLP35914 325 aa18.3■□□□□ 0.52
PSPC1-201ENST00000338910 NR4A2P43354 598 aa18.3■□□□□ 0.52
PSPC1-201ENST00000338910 MAP2K4P45985 399 aa18.3■□□□□ 0.52
PSPC1-201ENST00000338910 AP1S1P61966 158 aa18.3■□□□□ 0.52
PSPC1-201ENST00000338910 BCL2L1Q07817 233 aa18.3■□□□□ 0.52
PSPC1-201ENST00000338910 IL18R1Q13478 541 aa18.3■□□□□ 0.52
PSPC1-201ENST00000338910 CARTPTQ16568 116 aa18.3■□□□□ 0.52
PSPC1-201ENST00000338910 C6orf136Q5SQH8 315 aa18.3■□□□□ 0.52
PSPC1-201ENST00000338910 PAGE2Q7Z2X7 111 aa18.3■□□□□ 0.52
PSPC1-201ENST00000338910 FBXO39Q8N4B4 442 aa18.3■□□□□ 0.52
PSPC1-201ENST00000338910 AADATQ8N5Z0 425 aa18.3■□□□□ 0.52
PSPC1-201ENST00000338910 ARL10Q8N8L6 244 aa18.3■□□□□ 0.52
PSPC1-201ENST00000338910 SP7Q8TDD2 431 aaPredicted RBP18.3■□□□□ 0.52
PSPC1-201ENST00000338910 FRS2Q8WU20 508 aa18.3■□□□□ 0.52
PSPC1-201ENST00000338910 EEF1AKMT1Q8WVE0 214 aa18.3■□□□□ 0.52
PSPC1-201ENST00000338910 FBXO10Q9UK96 956 aa18.3■□□□□ 0.52
PSPC1-201ENST00000338910 CCL26Q9Y258 94 aa18.3■□□□□ 0.52
PSPC1-201ENST00000338910 VPS9D1Q9Y2B5 631 aa18.3■□□□□ 0.52
PSPC1-201ENST00000338910 NPEPPSL1A6NEC2 478 aa18.29■□□□□ 0.52
PSPC1-201ENST00000338910 KERAO60938 352 aa18.29■□□□□ 0.52
PSPC1-201ENST00000338910 ECI2O75521 394 aa18.29■□□□□ 0.52
PSPC1-201ENST00000338910 KCNK2O95069 426 aa18.29■□□□□ 0.52
PSPC1-201ENST00000338910 ANGPTL1O95841 491 aa18.29■□□□□ 0.52
PSPC1-201ENST00000338910 UROSP10746 265 aa18.29■□□□□ 0.52
PSPC1-201ENST00000338910 FAM151BQ6UXP7 276 aa18.29■□□□□ 0.52
PSPC1-201ENST00000338910 TMEM179BQ7Z7N9 219 aa18.29■□□□□ 0.52
PSPC1-201ENST00000338910 CAPSLQ8WWF8 208 aa18.29■□□□□ 0.52
PSPC1-201ENST00000338910 FIG4Q92562 907 aa18.29■□□□□ 0.52
PSPC1-201ENST00000338910 ACOX2Q99424 681 aa18.29■□□□□ 0.52
PSPC1-201ENST00000338910 C17orf80Q9BSJ5 609 aa18.29■□□□□ 0.52
PSPC1-201ENST00000338910 TMEFF2Q9UIK5 374 aaPredicted RBP18.29■□□□□ 0.52
PSPC1-201ENST00000338910 TRMT6Q9UJA5 497 aaKnown RBP18.29■□□□□ 0.52
PSPC1-201ENST00000338910 C5orf42Q9H799 3197 aa18.29■□□□□ 0.52
PSPC1-201ENST00000338910 E5RI56 91 aa18.29■□□□□ 0.52
PSPC1-201ENST00000338910 H7C0S8 307 aa18.29■□□□□ 0.52
PSPC1-201ENST00000338910 ARNTLO00327 626 aa18.29■□□□□ 0.52
PSPC1-201ENST00000338910 PRMT5O14744 637 aaPredicted RBP18.29■□□□□ 0.52
PSPC1-201ENST00000338910 SNPHO15079 494 aa18.29■□□□□ 0.52
PSPC1-201ENST00000338910 GSNP06396 782 aa18.29■□□□□ 0.52
PSPC1-201ENST00000338910 CTSOP43234 321 aaPredicted RBP18.29■□□□□ 0.52
PSPC1-201ENST00000338910 CLCN4P51793 760 aa18.29■□□□□ 0.52
PSPC1-201ENST00000338910 SEMG2Q02383 582 aa18.29■□□□□ 0.52
PSPC1-201ENST00000338910 PPP1R8Q12972 351 aaKnown RBP18.29■□□□□ 0.52
PSPC1-201ENST00000338910 PLEKHG6Q3KR16 790 aa18.29■□□□□ 0.52
PSPC1-201ENST00000338910 DGKKQ5KSL6 1271 aa18.29■□□□□ 0.52
PSPC1-201ENST00000338910 EFL1Q7Z2Z2 1120 aaKnown RBP18.29■□□□□ 0.52
PSPC1-201ENST00000338910 SVOPQ8N4V2 548 aa18.29■□□□□ 0.52
PSPC1-201ENST00000338910 SPPL3Q8TCT6 385 aa18.29■□□□□ 0.52
PSPC1-201ENST00000338910 FUBP1Q96AE4 644 aaKnown RBP18.29■□□□□ 0.52
PSPC1-201ENST00000338910 TCEAL4Q96EI5 215 aa18.29■□□□□ 0.52
PSPC1-201ENST00000338910 SLC47A1Q96FL8 570 aa18.29■□□□□ 0.52
PSPC1-201ENST00000338910 DUSP21Q9H596 190 aa18.29■□□□□ 0.52
PSPC1-201ENST00000338910 ABCB10Q9NRK6 738 aa18.29■□□□□ 0.52
PSPC1-201ENST00000338910 TSR3Q9UJK0 312 aaKnown RBP18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms