RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 THOC6Q86W42 341 aaKnown RBP16.9■□□□□ 0.3
DDX28-201ENST00000332395 NRSN1Q8IZ57 195 aa16.9■□□□□ 0.3
DDX28-201ENST00000332395 FAM47BQ8NA70 645 aa16.9■□□□□ 0.3
DDX28-201ENST00000332395 TNIP2Q8NFZ5 429 aa16.9■□□□□ 0.3
DDX28-201ENST00000332395 LZICQ8WZA0 190 aa16.9■□□□□ 0.3
DDX28-201ENST00000332395 FIG4Q92562 907 aa16.9■□□□□ 0.3
DDX28-201ENST00000332395 FOXJ1Q92949 421 aa16.9■□□□□ 0.3
DDX28-201ENST00000332395 NXPE3Q969Y0 559 aa16.9■□□□□ 0.3
DDX28-201ENST00000332395 VPS50Q96JG6 964 aa16.9■□□□□ 0.3
DDX28-201ENST00000332395 APOLD1Q96LR9 279 aa16.9■□□□□ 0.3
DDX28-201ENST00000332395 CCM2Q9BSQ5 444 aa16.9■□□□□ 0.3
DDX28-201ENST00000332395 PAIP1Q9H074 479 aaKnown RBP16.9■□□□□ 0.3
DDX28-201ENST00000332395 RBM38Q9H0Z9 239 aaKnown RBP16.9■□□□□ 0.3
DDX28-201ENST00000332395 SERHLQ9NQF3 203 aa16.9■□□□□ 0.3
DDX28-201ENST00000332395 SLC6A13Q9NSD5 602 aa16.9■□□□□ 0.3
DDX28-201ENST00000332395 OLAHQ9NV23 265 aa16.9■□□□□ 0.3
DDX28-201ENST00000332395 SLC5A10A0PJK1 596 aa16.89■□□□□ 0.3
DDX28-201ENST00000332395 PSMD11O00231 422 aa16.89■□□□□ 0.3
DDX28-201ENST00000332395 GSTA4O15217 222 aa16.89■□□□□ 0.3
DDX28-201ENST00000332395 UGDHO60701 494 aa16.89■□□□□ 0.3
DDX28-201ENST00000332395 ERN1O75460 977 aaKnown RBP16.89■□□□□ 0.3
DDX28-201ENST00000332395 AMD1P17707 334 aa16.89■□□□□ 0.3
DDX28-201ENST00000332395 CD22P20273 847 aa16.89■□□□□ 0.3
DDX28-201ENST00000332395 METAP1P53582 386 aa16.89■□□□□ 0.3
DDX28-201ENST00000332395 HPCAP84074 193 aa16.89■□□□□ 0.3
DDX28-201ENST00000332395 FAM98BQ52LJ0 330 aaKnown RBP16.89■□□□□ 0.3
DDX28-201ENST00000332395 RNF175Q8N4F7 328 aa16.89■□□□□ 0.3
DDX28-201ENST00000332395 DNAJB8Q8NHS0 232 aa16.89■□□□□ 0.3
DDX28-201ENST00000332395 TESCQ96BS2 214 aa16.89■□□□□ 0.3
DDX28-201ENST00000332395 BDH2Q9BUT1 245 aa16.89■□□□□ 0.3
DDX28-201ENST00000332395 TMEM106CQ9BVX2 250 aa16.89■□□□□ 0.3
DDX28-201ENST00000332395 KCNH6Q9H252 994 aa16.89■□□□□ 0.3
DDX28-201ENST00000332395 DPP7Q9UHL4 492 aa16.89■□□□□ 0.3
DDX28-201ENST00000332395 PPT2Q9UMR5 302 aa16.89■□□□□ 0.3
DDX28-201ENST00000332395 INVSQ9Y283 1065 aa16.89■□□□□ 0.3
DDX28-201ENST00000332395 MAN2B2Q9Y2E5 1009 aa16.89■□□□□ 0.3
DDX28-201ENST00000332395 MYRFQ9Y2G1 1151 aa16.89■□□□□ 0.3
DDX28-201ENST00000332395 PCDHB14Q9Y5E9 798 aa16.89■□□□□ 0.3
DDX28-201ENST00000332395 PRRT4C9JH25 899 aa16.89■□□□□ 0.29
DDX28-201ENST00000332395 H3BNH8 94 aa16.89■□□□□ 0.29
DDX28-201ENST00000332395 SPINT1O43278 529 aa16.89■□□□□ 0.29
DDX28-201ENST00000332395 CATP04040 527 aaKnown RBP16.89■□□□□ 0.29
DDX28-201ENST00000332395 PRNPP04156 253 aa16.89■□□□□ 0.29
DDX28-201ENST00000332395 POU2F2P09086 479 aa16.89■□□□□ 0.29
DDX28-201ENST00000332395 GNAO1P09471 354 aa16.89■□□□□ 0.29
DDX28-201ENST00000332395 RAP2AP10114 183 aa16.89■□□□□ 0.29
DDX28-201ENST00000332395 MYOGP15173 224 aa16.89■□□□□ 0.29
DDX28-201ENST00000332395 ACPPP15309 386 aa16.89■□□□□ 0.29
DDX28-201ENST00000332395 CCSMST1Q4G0I0 132 aa16.89■□□□□ 0.29
DDX28-201ENST00000332395 XKR6Q5GH73 641 aa16.89■□□□□ 0.29
DDX28-201ENST00000332395 LRIF1Q5T3J3 769 aa16.89■□□□□ 0.29
DDX28-201ENST00000332395 TMEM220Q6QAJ8 160 aa16.89■□□□□ 0.29
DDX28-201ENST00000332395 AGTRAPQ6RW13 159 aa16.89■□□□□ 0.29
DDX28-201ENST00000332395 ETFBKMTQ8IXQ9 262 aa16.89■□□□□ 0.29
DDX28-201ENST00000332395 TSPAN14Q8NG11 270 aa16.89■□□□□ 0.29
DDX28-201ENST00000332395 ATL1Q8WXF7 558 aa16.89■□□□□ 0.29
DDX28-201ENST00000332395 SMG7Q92540 1137 aaKnown RBP16.89■□□□□ 0.29
DDX28-201ENST00000332395 DTD2Q96FN9 168 aa16.89■□□□□ 0.29
DDX28-201ENST00000332395 RMND5BQ96G75 393 aaPredicted RBP16.89■□□□□ 0.29
DDX28-201ENST00000332395 CCDC138Q96M89 665 aa16.89■□□□□ 0.29
DDX28-201ENST00000332395 TBCDQ9BTW9 1192 aa16.89■□□□□ 0.29
DDX28-201ENST00000332395 RMND5AQ9H871 391 aa16.89■□□□□ 0.29
DDX28-201ENST00000332395 CAAP1Q9H8G2 361 aa16.89■□□□□ 0.29
DDX28-201ENST00000332395 STOX2Q9P2F5 926 aaPredicted RBP16.89■□□□□ 0.29
DDX28-201ENST00000332395 ZNF639Q9UID6 485 aa16.89■□□□□ 0.29
DDX28-201ENST00000332395 AP3M1Q9Y2T2 418 aa16.89■□□□□ 0.29
DDX28-201ENST00000332395 A0A096LPI6 279 aa16.88■□□□□ 0.29
DDX28-201ENST00000332395 ELOVL7A1L3X0 281 aa16.88■□□□□ 0.29
DDX28-201ENST00000332395 E7EQ34 232 aa16.88■□□□□ 0.29
DDX28-201ENST00000332395 CLOCKO15516 846 aa16.88■□□□□ 0.29
DDX28-201ENST00000332395 IMPDH2P12268 514 aa16.88■□□□□ 0.29
DDX28-201ENST00000332395 ZNF23P17027 643 aa16.88■□□□□ 0.29
DDX28-201ENST00000332395 BDKRB1P46663 353 aa16.88■□□□□ 0.29
DDX28-201ENST00000332395 NAE1Q13564 534 aa16.88■□□□□ 0.29
DDX28-201ENST00000332395 SLC36A3Q495N2 470 aa16.88■□□□□ 0.29
DDX28-201ENST00000332395 NOXRED1Q6NXP6 359 aa16.88■□□□□ 0.29
DDX28-201ENST00000332395 RBM12BQ8IXT5 1001 aaKnown RBP16.88■□□□□ 0.29
DDX28-201ENST00000332395 PHACTR4Q8IZ21 702 aa16.88■□□□□ 0.29
DDX28-201ENST00000332395 ALDH16A1Q8IZ83 802 aa16.88■□□□□ 0.29
DDX28-201ENST00000332395 SLC22A15Q8IZD6 547 aa16.88■□□□□ 0.29
DDX28-201ENST00000332395 C12orf76Q8N812 135 aaPredicted RBP16.88■□□□□ 0.29
DDX28-201ENST00000332395 CSGALNACT1Q8TDX6 532 aa16.88■□□□□ 0.29
DDX28-201ENST00000332395 MED8Q96G25 268 aa16.88■□□□□ 0.29
DDX28-201ENST00000332395 ITCHQ96J02 903 aa16.88■□□□□ 0.29
DDX28-201ENST00000332395 ZFYVE19Q96K21 471 aa16.88■□□□□ 0.29
DDX28-201ENST00000332395 EGLN2Q96KS0 407 aa16.88■□□□□ 0.29
DDX28-201ENST00000332395 COQ10AQ96MF6 247 aa16.88■□□□□ 0.29
DDX28-201ENST00000332395 OSBPL6Q9BZF3 934 aa16.88■□□□□ 0.29
DDX28-201ENST00000332395 KAT8Q9H7Z6 458 aaKnown RBP16.88■□□□□ 0.29
DDX28-201ENST00000332395 COQ6Q9Y2Z9 468 aa16.88■□□□□ 0.29
DDX28-201ENST00000332395 CHD9Q3L8U1 2897 aa16.88■□□□□ 0.29
DDX28-201ENST00000332395 H0Y858 1186 aa16.88■□□□□ 0.29
DDX28-201ENST00000332395 LRATO95237 230 aa16.88■□□□□ 0.29
DDX28-201ENST00000332395 HLA-EP13747 358 aa16.88■□□□□ 0.29
DDX28-201ENST00000332395 PCSK2P16519 638 aa16.88■□□□□ 0.29
DDX28-201ENST00000332395 MYF6P23409 242 aa16.88■□□□□ 0.29
DDX28-201ENST00000332395 PBLDP30039 288 aaPredicted RBP16.88■□□□□ 0.29
DDX28-201ENST00000332395 RPS9P46781 194 aaKnown RBP16.88■□□□□ 0.29
DDX28-201ENST00000332395 NR1H2P55055 460 aa16.88■□□□□ 0.29
DDX28-201ENST00000332395 CHRNB3Q05901 458 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms