RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 MAGEB10Q96LZ2 347 aaPredicted RBP9.91□□□□□ -0.82
VIPAS39-201ENST00000327028 PRRX2Q99811 253 aa9.91□□□□□ -0.82
VIPAS39-201ENST00000327028 HAUS8Q9BT25 410 aa9.91□□□□□ -0.82
VIPAS39-201ENST00000327028 NUSAP1Q9BXS6 441 aaKnown RBP9.91□□□□□ -0.82
VIPAS39-201ENST00000327028 TWSG1Q9GZX9 223 aa9.91□□□□□ -0.82
VIPAS39-201ENST00000327028 OR6C2Q9NZP2 312 aa9.91□□□□□ -0.82
VIPAS39-201ENST00000327028 ADAMTS9Q9P2N4 1935 aa9.91□□□□□ -0.82
VIPAS39-201ENST00000327028 TRAF6Q9Y4K3 522 aa9.91□□□□□ -0.82
VIPAS39-201ENST00000327028 USH1CQ9Y6N9 552 aa9.91□□□□□ -0.82
VIPAS39-201ENST00000327028 MATN2O00339 956 aa9.9□□□□□ -0.82
VIPAS39-201ENST00000327028 ARHGAP33O14559 1287 aa9.9□□□□□ -0.82
VIPAS39-201ENST00000327028 CLGNO14967 610 aa9.9□□□□□ -0.82
VIPAS39-201ENST00000327028 UGDHO60701 494 aa9.9□□□□□ -0.82
VIPAS39-201ENST00000327028 OR4F21O95013 312 aa9.9□□□□□ -0.82
VIPAS39-201ENST00000327028 SYPP08247 313 aa9.9□□□□□ -0.82
VIPAS39-201ENST00000327028 CCT8P50990 548 aa9.9□□□□□ -0.82
VIPAS39-201ENST00000327028 MAZP56270 477 aaKnown RBP9.9□□□□□ -0.82
VIPAS39-201ENST00000327028 TSTA3Q13630 321 aaPredicted RBP9.9□□□□□ -0.82
VIPAS39-201ENST00000327028 PLCL1Q15111 1095 aa9.9□□□□□ -0.82
VIPAS39-201ENST00000327028 GGTA1PQ4G0N0 100 aa9.9□□□□□ -0.82
VIPAS39-201ENST00000327028 C14orf28Q4W4Y0 310 aa9.9□□□□□ -0.82
VIPAS39-201ENST00000327028 LETMD1Q6P1Q0 360 aa9.9□□□□□ -0.82
VIPAS39-201ENST00000327028 MILR1Q7Z6M3 343 aa9.9□□□□□ -0.82
VIPAS39-201ENST00000327028 CLYBLQ8N0X4 340 aa9.9□□□□□ -0.82
VIPAS39-201ENST00000327028 ARL14Q8N4G2 192 aa9.9□□□□□ -0.82
VIPAS39-201ENST00000327028 KYQ8NBH2 561 aa9.9□□□□□ -0.82
VIPAS39-201ENST00000327028 GPR156Q8NFN8 814 aa9.9□□□□□ -0.82
VIPAS39-201ENST00000327028 RFWD2Q8NHY2 731 aa9.9□□□□□ -0.82
VIPAS39-201ENST00000327028 JPH3Q8WXH2 748 aaPredicted RBP9.9□□□□□ -0.82
VIPAS39-201ENST00000327028 SLC29A3Q9BZD2 475 aa9.9□□□□□ -0.82
VIPAS39-201ENST00000327028 ARRDC1-AS1Q9H2J1 176 aa9.9□□□□□ -0.82
VIPAS39-201ENST00000327028 GAREM1Q9H706 876 aa9.9□□□□□ -0.82
VIPAS39-201ENST00000327028 ACTR8Q9H981 624 aa9.9□□□□□ -0.82
VIPAS39-201ENST00000327028 UCK1Q9HA47 277 aa9.9□□□□□ -0.82
VIPAS39-201ENST00000327028 NLGN3Q9NZ94 848 aa9.9□□□□□ -0.82
VIPAS39-201ENST00000327028 KCNE2Q9Y6J6 123 aa9.9□□□□□ -0.82
VIPAS39-201ENST00000327028 HDAC3O15379 428 aa9.9□□□□□ -0.82
VIPAS39-201ENST00000327028 CRCPO75575 148 aa9.9□□□□□ -0.82
VIPAS39-201ENST00000327028 CLDN9O95484 217 aa9.9□□□□□ -0.82
VIPAS39-201ENST00000327028 GIMD1P0DJR0 217 aa9.9□□□□□ -0.82
VIPAS39-201ENST00000327028 UROSP10746 265 aa9.9□□□□□ -0.82
VIPAS39-201ENST00000327028 NPPBP16860 134 aa9.9□□□□□ -0.82
VIPAS39-201ENST00000327028 GNAZP19086 355 aa9.9□□□□□ -0.82
VIPAS39-201ENST00000327028 ARL1P40616 181 aaPredicted RBP9.9□□□□□ -0.82
VIPAS39-201ENST00000327028 FOXA1P55317 472 aa9.9□□□□□ -0.82
VIPAS39-201ENST00000327028 THEMIS2Q5TEJ8 643 aa9.9□□□□□ -0.82
VIPAS39-201ENST00000327028 GKAP1Q5VSY0 366 aaPredicted RBP9.9□□□□□ -0.82
VIPAS39-201ENST00000327028 TMEM26Q6ZUK4 368 aa9.9□□□□□ -0.82
VIPAS39-201ENST00000327028 EFL1Q7Z2Z2 1120 aaKnown RBP9.9□□□□□ -0.82
VIPAS39-201ENST00000327028 MAVSQ7Z434 540 aa9.9□□□□□ -0.82
VIPAS39-201ENST00000327028 C2orf73Q8N5S3 287 aaPredicted RBP9.9□□□□□ -0.82
VIPAS39-201ENST00000327028 L3MBTL4Q8NA19 623 aa9.9□□□□□ -0.82
VIPAS39-201ENST00000327028 SAP25Q8TEE9 199 aa9.9□□□□□ -0.82
VIPAS39-201ENST00000327028 THOC1Q96FV9 657 aaKnown RBP9.9□□□□□ -0.82
VIPAS39-201ENST00000327028 CDK15Q96Q40 435 aa9.9□□□□□ -0.82
VIPAS39-201ENST00000327028 LRFN3Q9BTN0 628 aa9.9□□□□□ -0.82
VIPAS39-201ENST00000327028 SRMSQ9H3Y6 488 aa9.9□□□□□ -0.82
VIPAS39-201ENST00000327028 ABCF3Q9NUQ8 709 aa9.9□□□□□ -0.82
VIPAS39-201ENST00000327028 KCNK4Q9NYG8 393 aa9.9□□□□□ -0.82
VIPAS39-201ENST00000327028 CUL9Q8IWT3 2517 aa9.9□□□□□ -0.83
VIPAS39-201ENST00000327028 LILRA5A6NI73 299 aa9.89□□□□□ -0.83
VIPAS39-201ENST00000327028 E7EQ34 232 aa9.89□□□□□ -0.83
VIPAS39-201ENST00000327028 ZNF195O14628 629 aa9.89□□□□□ -0.83
VIPAS39-201ENST00000327028 PRICKLE3O43900 615 aaPredicted RBP9.89□□□□□ -0.83
VIPAS39-201ENST00000327028 CHRM5P08912 532 aaPredicted RBP9.89□□□□□ -0.83
VIPAS39-201ENST00000327028 HGFP14210 728 aa9.89□□□□□ -0.83
VIPAS39-201ENST00000327028 PEBP1P30086 187 aaKnown RBP9.89□□□□□ -0.83
VIPAS39-201ENST00000327028 E2F2Q14209 437 aa9.89□□□□□ -0.83
VIPAS39-201ENST00000327028 UGT3A2Q3SY77 523 aa9.89□□□□□ -0.83
VIPAS39-201ENST00000327028 PLA2G2CQ5R387 149 aa9.89□□□□□ -0.83
VIPAS39-201ENST00000327028 CLEC6AQ6EIG7 209 aa9.89□□□□□ -0.83
VIPAS39-201ENST00000327028 SLCO4C1Q6ZQN7 724 aa9.89□□□□□ -0.83
VIPAS39-201ENST00000327028 C17orf64Q86WR6 236 aa9.89□□□□□ -0.83
VIPAS39-201ENST00000327028 HOMEZQ8IX15 550 aa9.89□□□□□ -0.83
VIPAS39-201ENST00000327028 ARL10Q8N8L6 244 aa9.89□□□□□ -0.83
VIPAS39-201ENST00000327028 CDYL2Q8N8U2 506 aa9.89□□□□□ -0.83
VIPAS39-201ENST00000327028 DCBLD1Q8N8Z6 715 aa9.89□□□□□ -0.83
VIPAS39-201ENST00000327028 OR4E2Q8NGC2 313 aa9.89□□□□□ -0.83
VIPAS39-201ENST00000327028 C10orf82Q8WW14 230 aa9.89□□□□□ -0.83
VIPAS39-201ENST00000327028 SLC5A11Q8WWX8 675 aa9.89□□□□□ -0.83
VIPAS39-201ENST00000327028 STON2Q8WXE9 905 aa9.89□□□□□ -0.83
VIPAS39-201ENST00000327028 NEIL2Q969S2 332 aa9.89□□□□□ -0.83
VIPAS39-201ENST00000327028 SH3KBP1Q96B97 665 aa9.89□□□□□ -0.83
VIPAS39-201ENST00000327028 WDR34Q96EX3 536 aa9.89□□□□□ -0.83
VIPAS39-201ENST00000327028 KCNA7Q96RP8 456 aa9.89□□□□□ -0.83
VIPAS39-201ENST00000327028 EHD1Q9H4M9 534 aa9.89□□□□□ -0.83
VIPAS39-201ENST00000327028 KCNK13Q9HB14 408 aa9.89□□□□□ -0.83
VIPAS39-201ENST00000327028 IL21RQ9HBE5 538 aa9.89□□□□□ -0.83
VIPAS39-201ENST00000327028 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.89□□□□□ -0.83
VIPAS39-201ENST00000327028 TAC3Q9UHF0 121 aa9.89□□□□□ -0.83
VIPAS39-201ENST00000327028 DCTN4Q9UJW0 460 aa9.89□□□□□ -0.83
VIPAS39-201ENST00000327028 SH2B3Q9UQQ2 575 aa9.89□□□□□ -0.83
VIPAS39-201ENST00000327028 RNF11Q9Y3C5 154 aa9.89□□□□□ -0.83
VIPAS39-201ENST00000327028 PCDHB11Q9Y5F2 797 aa9.89□□□□□ -0.83
VIPAS39-201ENST00000327028 KCNE1BA0A087WTH5 132 aa9.89□□□□□ -0.83
VIPAS39-201ENST00000327028 HGSO14964 777 aaPredicted RBP9.89□□□□□ -0.83
VIPAS39-201ENST00000327028 PRAMEF4O60810 478 aa9.89□□□□□ -0.83
VIPAS39-201ENST00000327028 CCNDBP1O95273 360 aa9.89□□□□□ -0.83
VIPAS39-201ENST00000327028 ALPPL2P10696 532 aa9.89□□□□□ -0.83
VIPAS39-201ENST00000327028 CASP2P42575 452 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms