RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 RACK1P63244 317 aaKnown RBP12.39□□□□□ -0.43
DDX39A-202ENST00000324340 CLCQ05315 142 aa12.39□□□□□ -0.43
DDX39A-202ENST00000324340 LCP2Q13094 533 aa12.39□□□□□ -0.43
DDX39A-202ENST00000324340 ZXDCQ2QGD7 858 aaPredicted RBP12.39□□□□□ -0.43
DDX39A-202ENST00000324340 OGFRL1Q5TC84 451 aaPredicted RBP12.39□□□□□ -0.43
DDX39A-202ENST00000324340 C1orf146Q5VVC0 180 aa12.39□□□□□ -0.43
DDX39A-202ENST00000324340 WASH2PQ6VEQ5 465 aa12.39□□□□□ -0.43
DDX39A-202ENST00000324340 RPS27LQ71UM5 84 aaKnown RBP12.39□□□□□ -0.43
DDX39A-202ENST00000324340 CUZD1Q86UP6 607 aa12.39□□□□□ -0.43
DDX39A-202ENST00000324340 IQCHQ86VS3 1027 aa12.39□□□□□ -0.43
DDX39A-202ENST00000324340 WDR75Q8IWA0 830 aaKnown RBP12.39□□□□□ -0.43
DDX39A-202ENST00000324340 KLHDC8AQ8IYD2 350 aa12.39□□□□□ -0.43
DDX39A-202ENST00000324340 ICA1LQ8NDH6 482 aa12.39□□□□□ -0.43
DDX39A-202ENST00000324340 STON2Q8WXE9 905 aa12.39□□□□□ -0.43
DDX39A-202ENST00000324340 DNASE2BQ8WZ79 361 aa12.39□□□□□ -0.43
DDX39A-202ENST00000324340 SNX19Q92543 992 aa12.39□□□□□ -0.43
DDX39A-202ENST00000324340 KLHDC7BQ96G42 594 aa12.39□□□□□ -0.43
DDX39A-202ENST00000324340 SLC6A18Q96N87 628 aa12.39□□□□□ -0.43
DDX39A-202ENST00000324340 NSUN5Q96P11 429 aaKnown RBP12.39□□□□□ -0.43
DDX39A-202ENST00000324340 HAUS8Q9BT25 410 aa12.39□□□□□ -0.43
DDX39A-202ENST00000324340 ZBTB26Q9HCK0 441 aa12.39□□□□□ -0.43
DDX39A-202ENST00000324340 WASH6PQ9NQA3 447 aa12.39□□□□□ -0.43
DDX39A-202ENST00000324340 PNPOQ9NVS9 261 aa12.39□□□□□ -0.43
DDX39A-202ENST00000324340 SLC7A8Q9UHI5 535 aa12.39□□□□□ -0.43
DDX39A-202ENST00000324340 BCAP29Q9UHQ4 241 aa12.39□□□□□ -0.43
DDX39A-202ENST00000324340 EIF2B4Q9UI10 523 aaKnown RBP12.39□□□□□ -0.43
DDX39A-202ENST00000324340 ZDHHC2Q9UIJ5 367 aa12.39□□□□□ -0.43
DDX39A-202ENST00000324340 PCOLCE2Q9UKZ9 415 aa12.39□□□□□ -0.43
DDX39A-202ENST00000324340 GPSM3Q9Y4H4 160 aa12.39□□□□□ -0.43
DDX39A-202ENST00000324340 ST14Q9Y5Y6 855 aa12.39□□□□□ -0.43
DDX39A-202ENST00000324340 SLCO1B1Q9Y6L6 691 aa12.39□□□□□ -0.43
DDX39A-202ENST00000324340 VCANP13611 3396 aa12.38□□□□□ -0.43
DDX39A-202ENST00000324340 A0A0G2JND7 137 aa12.38□□□□□ -0.43
DDX39A-202ENST00000324340 PABPN1LA6NDY0 278 aaKnown RBP12.38□□□□□ -0.43
DDX39A-202ENST00000324340 TRMUO75648 421 aaKnown RBP12.38□□□□□ -0.43
DDX39A-202ENST00000324340 MLYCDO95822 493 aa12.38□□□□□ -0.43
DDX39A-202ENST00000324340 TFAP2AP05549 437 aa12.38□□□□□ -0.43
DDX39A-202ENST00000324340 SLC35G4P0C7Q5 338 aa12.38□□□□□ -0.43
DDX39A-202ENST00000324340 IDSP22304 550 aa12.38□□□□□ -0.43
DDX39A-202ENST00000324340 BDKRB1P46663 353 aa12.38□□□□□ -0.43
DDX39A-202ENST00000324340 HSPA7P48741 367 aa12.38□□□□□ -0.43
DDX39A-202ENST00000324340 CDH13P55290 713 aa12.38□□□□□ -0.43
DDX39A-202ENST00000324340 SH3BP2P78314 561 aa12.38□□□□□ -0.43
DDX39A-202ENST00000324340 EIF2B5Q13144 721 aaKnown RBP12.38□□□□□ -0.43
DDX39A-202ENST00000324340 APOFQ13790 326 aa12.38□□□□□ -0.43
DDX39A-202ENST00000324340 FZD2Q14332 565 aa12.38□□□□□ -0.43
DDX39A-202ENST00000324340 C18orf21Q32NC0 220 aaPredicted RBP12.38□□□□□ -0.43
DDX39A-202ENST00000324340 FBXO48Q5FWF7 155 aa12.38□□□□□ -0.43
DDX39A-202ENST00000324340 MBOAT1Q6ZNC8 495 aa12.38□□□□□ -0.43
DDX39A-202ENST00000324340 RBM44Q6ZP01 1051 aaKnown RBP12.38□□□□□ -0.43
DDX39A-202ENST00000324340 SATL1Q86VE3 508 aa12.38□□□□□ -0.43
DDX39A-202ENST00000324340 MAML2Q8IZL2 1156 aaPredicted RBP12.38□□□□□ -0.43
DDX39A-202ENST00000324340 RBM15BQ8NDT2 890 aaKnown RBP12.38□□□□□ -0.43
DDX39A-202ENST00000324340 ATL1Q8WXF7 558 aa12.38□□□□□ -0.43
DDX39A-202ENST00000324340 TFGQ92734 400 aaPredicted RBP12.38□□□□□ -0.43
DDX39A-202ENST00000324340 ESAMQ96AP7 390 aa12.38□□□□□ -0.43
DDX39A-202ENST00000324340 HSPA12BQ96MM6 686 aa12.38□□□□□ -0.43
DDX39A-202ENST00000324340 ZNF382Q96SR6 550 aa12.38□□□□□ -0.43
DDX39A-202ENST00000324340 PKP4Q99569 1192 aa12.38□□□□□ -0.43
DDX39A-202ENST00000324340 SLC32A1Q9H598 525 aa12.38□□□□□ -0.43
DDX39A-202ENST00000324340 RHBDL2Q9NX52 303 aa12.38□□□□□ -0.43
DDX39A-202ENST00000324340 WWOXQ9NZC7 414 aa12.38□□□□□ -0.43
DDX39A-202ENST00000324340 VTI1BQ9UEU0 232 aa12.38□□□□□ -0.43
DDX39A-202ENST00000324340 MARCOQ9UEW3 520 aaPredicted RBP12.38□□□□□ -0.43
DDX39A-202ENST00000324340 MOSPD1Q9UJG1 213 aa12.38□□□□□ -0.43
DDX39A-202ENST00000324340 DCTN4Q9UJW0 460 aa12.38□□□□□ -0.43
DDX39A-202ENST00000324340 KCNK6Q9Y257 313 aa12.38□□□□□ -0.43
DDX39A-202ENST00000324340 PLEKHM1Q9Y4G2 1056 aa12.38□□□□□ -0.43
DDX39A-202ENST00000324340 AK5Q9Y6K8 562 aa12.38□□□□□ -0.43
DDX39A-202ENST00000324340 TECTAO75443 2155 aa12.38□□□□□ -0.43
DDX39A-202ENST00000324340 C15orf38-AP3S2A0A0A6YYH1 394 aa12.37□□□□□ -0.43
DDX39A-202ENST00000324340 MEI4A8MW99 385 aa12.37□□□□□ -0.43
DDX39A-202ENST00000324340 K7EPI3 171 aa12.37□□□□□ -0.43
DDX39A-202ENST00000324340 IFRD1O00458 451 aaPredicted RBP12.37□□□□□ -0.43
DDX39A-202ENST00000324340 PPP6CO00743 305 aa12.37□□□□□ -0.43
DDX39A-202ENST00000324340 HDAC3O15379 428 aa12.37□□□□□ -0.43
DDX39A-202ENST00000324340 LAMTOR5O43504 91 aa12.37□□□□□ -0.43
DDX39A-202ENST00000324340 STK16O75716 305 aa12.37□□□□□ -0.43
DDX39A-202ENST00000324340 BAG2O95816 211 aa12.37□□□□□ -0.43
DDX39A-202ENST00000324340 WNT1P04628 370 aa12.37□□□□□ -0.43
DDX39A-202ENST00000324340 RPN2P04844 631 aa12.37□□□□□ -0.43
DDX39A-202ENST00000324340 SERPINA6P08185 405 aa12.37□□□□□ -0.43
DDX39A-202ENST00000324340 KITP10721 976 aa12.37□□□□□ -0.43
DDX39A-202ENST00000324340 ZNF12P17014 697 aa12.37□□□□□ -0.43
DDX39A-202ENST00000324340 CD38P28907 300 aa12.37□□□□□ -0.43
DDX39A-202ENST00000324340 PRDX6P30041 224 aa12.37□□□□□ -0.43
DDX39A-202ENST00000324340 PIK3CGP48736 1102 aa12.37□□□□□ -0.43
DDX39A-202ENST00000324340 PKNOX1P55347 436 aa12.37□□□□□ -0.43
DDX39A-202ENST00000324340 NUP107P57740 925 aa12.37□□□□□ -0.43
DDX39A-202ENST00000324340 GTF2H2Q13888 395 aa12.37□□□□□ -0.43
DDX39A-202ENST00000324340 GRB7Q14451 532 aa12.37□□□□□ -0.43
DDX39A-202ENST00000324340 UAP1L1Q3KQV9 507 aa12.37□□□□□ -0.43
DDX39A-202ENST00000324340 CCSMST1Q4G0I0 132 aa12.37□□□□□ -0.43
DDX39A-202ENST00000324340 GTF2H2CQ6P1K8 395 aa12.37□□□□□ -0.43
DDX39A-202ENST00000324340 PGM2L1Q6PCE3 622 aa12.37□□□□□ -0.43
DDX39A-202ENST00000324340 TSSK4Q6SA08 328 aa12.37□□□□□ -0.43
DDX39A-202ENST00000324340 ABRAXAS1Q6UWZ7 409 aa12.37□□□□□ -0.43
DDX39A-202ENST00000324340 LRRC70Q7Z2Q7 622 aa12.37□□□□□ -0.43
DDX39A-202ENST00000324340 MAVSQ7Z434 540 aa12.37□□□□□ -0.43
DDX39A-202ENST00000324340 GOLGA7Q7Z5G4 137 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms