RNA–Protein interactions for RNA: ENST00000323668.11

TCOF1-201, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCOF1, Length 4,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-201ENST00000323668 GPR45Q9Y5Y3 372 aa14.38□□□□□ -0.11
TCOF1-201ENST00000323668 SHANK3Q9BYB0 1731 aa14.38□□□□□ -0.11
TCOF1-201ENST00000323668 RPL10P27635 214 aaKnown RBP14.38□□□□□ -0.11
TCOF1-201ENST00000323668 ADRA1AP35348 466 aa14.38□□□□□ -0.11
TCOF1-201ENST00000323668 GRIA2P42262 883 aa14.38□□□□□ -0.11
TCOF1-201ENST00000323668 ZNF404Q494X3 552 aa14.38□□□□□ -0.11
TCOF1-201ENST00000323668 SLC22A16Q86VW1 577 aa14.38□□□□□ -0.11
TCOF1-201ENST00000323668 KRTCAP2Q8N6L1 136 aa14.38□□□□□ -0.11
TCOF1-201ENST00000323668 VANGL1Q8TAA9 524 aaPredicted RBP14.38□□□□□ -0.11
TCOF1-201ENST00000323668 PIK3R3Q92569 461 aa14.38□□□□□ -0.11
TCOF1-201ENST00000323668 FAIM2Q9BWQ8 316 aa14.38□□□□□ -0.11
TCOF1-201ENST00000323668 TPT1P8Q9HAU6 139 aa14.38□□□□□ -0.11
TCOF1-201ENST00000323668 CAPN10Q9HC96 672 aa14.38□□□□□ -0.11
TCOF1-201ENST00000323668 HAT1O14929 419 aa14.38□□□□□ -0.11
TCOF1-201ENST00000323668 BCKDHAP12694 445 aa14.38□□□□□ -0.11
TCOF1-201ENST00000323668 MZT2AQ6P582 158 aa14.38□□□□□ -0.11
TCOF1-201ENST00000323668 HSH2DQ96JZ2 352 aa14.38□□□□□ -0.11
TCOF1-201ENST00000323668 RIMKLBQ9ULI2 386 aa14.38□□□□□ -0.11
TCOF1-201ENST00000323668 WDR37Q9Y2I8 494 aa14.38□□□□□ -0.11
TCOF1-201ENST00000323668 CLTBP09497 229 aa14.38□□□□□ -0.11
TCOF1-201ENST00000323668 SMIM18P0DKX4 95 aa14.38□□□□□ -0.11
TCOF1-201ENST00000323668 CBSLP0DN79 551 aa14.38□□□□□ -0.11
TCOF1-201ENST00000323668 CBSP35520 551 aa14.38□□□□□ -0.11
TCOF1-201ENST00000323668 DNASE1L3Q13609 305 aa14.38□□□□□ -0.11
TCOF1-201ENST00000323668 DCST1Q5T197 706 aa14.38□□□□□ -0.11
TCOF1-201ENST00000323668 CES4AQ5XG92 561 aa14.38□□□□□ -0.11
TCOF1-201ENST00000323668 PLET1Q6UQ28 207 aa14.38□□□□□ -0.11
TCOF1-201ENST00000323668 CYP7B1O75881 506 aa14.37□□□□□ -0.11
TCOF1-201ENST00000323668 AZGP1P25311 298 aaKnown RBP14.37□□□□□ -0.11
TCOF1-201ENST00000323668 AFF1P51825 1210 aaKnown RBP14.37□□□□□ -0.11
TCOF1-201ENST00000323668 GNA13Q14344 377 aa14.37□□□□□ -0.11
TCOF1-201ENST00000323668 FAM43BQ6ZT52 329 aaPredicted RBP14.37□□□□□ -0.11
TCOF1-201ENST00000323668 LGI4Q8N135 537 aa14.37□□□□□ -0.11
TCOF1-201ENST00000323668 TRPS1Q9UHF7 1281 aa14.37□□□□□ -0.11
TCOF1-201ENST00000323668 CFL2Q9Y281 166 aa14.37□□□□□ -0.11
TCOF1-201ENST00000323668 TNFRSF21O75509 655 aa14.37□□□□□ -0.11
TCOF1-201ENST00000323668 CHRNA1P02708 482 aa14.37□□□□□ -0.11
TCOF1-201ENST00000323668 ARSAP15289 507 aa14.37□□□□□ -0.11
TCOF1-201ENST00000323668 PRDX3P30048 256 aaKnown RBP14.37□□□□□ -0.11
TCOF1-201ENST00000323668 SP3Q02447 781 aa14.37□□□□□ -0.11
TCOF1-201ENST00000323668 ENPP6Q6UWR7 440 aa14.37□□□□□ -0.11
TCOF1-201ENST00000323668 SCML4Q8N228 414 aa14.37□□□□□ -0.11
TCOF1-201ENST00000323668 SCAIQ8N9R8 606 aa14.37□□□□□ -0.11
TCOF1-201ENST00000323668 AP2M1Q96CW1 435 aa14.37□□□□□ -0.11
TCOF1-201ENST00000323668 CMTM7Q96FZ5 175 aa14.37□□□□□ -0.11
TCOF1-201ENST00000323668 ATOH8Q96SQ7 321 aa14.37□□□□□ -0.11
TCOF1-201ENST00000323668 SPACA6W5XKT8 324 aa14.37□□□□□ -0.11
TCOF1-201ENST00000323668 A0A096LPI6 279 aa14.37□□□□□ -0.11
TCOF1-201ENST00000323668 WASH4PA8MWX3 477 aa14.37□□□□□ -0.11
TCOF1-201ENST00000323668 NEDD8-MDP1E9PL57 170 aa14.37□□□□□ -0.11
TCOF1-201ENST00000323668 ERAL1O75616 437 aaKnown RBP14.37□□□□□ -0.11
TCOF1-201ENST00000323668 UGT2B17O75795 530 aa14.37□□□□□ -0.11
TCOF1-201ENST00000323668 RPS17P08708 135 aaKnown RBP14.37□□□□□ -0.11
TCOF1-201ENST00000323668 BUD31P41223 144 aaPredicted RBP14.37□□□□□ -0.11
TCOF1-201ENST00000323668 NUDT6P53370 316 aa14.37□□□□□ -0.11
TCOF1-201ENST00000323668 PNLIPRP1P54315 467 aa14.37□□□□□ -0.11
TCOF1-201ENST00000323668 CD47Q08722 323 aa14.37□□□□□ -0.11
TCOF1-201ENST00000323668 SEMA3AQ14563 771 aa14.37□□□□□ -0.11
TCOF1-201ENST00000323668 RBM12BQ8IXT5 1001 aaKnown RBP14.37□□□□□ -0.11
TCOF1-201ENST00000323668 METTL25Q8N6Q8 603 aa14.37□□□□□ -0.11
TCOF1-201ENST00000323668 C9orf43Q8TAL5 461 aaPredicted RBP14.37□□□□□ -0.11
TCOF1-201ENST00000323668 XAGE5Q8WWM1 108 aa14.37□□□□□ -0.11
TCOF1-201ENST00000323668 LHPPQ9H008 270 aa14.37□□□□□ -0.11
TCOF1-201ENST00000323668 SUV39H2Q9H5I1 410 aa14.37□□□□□ -0.11
TCOF1-201ENST00000323668 FAM120CQ9NX05 1096 aaKnown RBP14.37□□□□□ -0.11
TCOF1-201ENST00000323668 M0QZQ0 153 aa14.36□□□□□ -0.11
TCOF1-201ENST00000323668 CASP9P55211 416 aa14.36□□□□□ -0.11
TCOF1-201ENST00000323668 PON2Q15165 354 aa14.36□□□□□ -0.11
TCOF1-201ENST00000323668 TPRG1LQ5T0D9 272 aa14.36□□□□□ -0.11
TCOF1-201ENST00000323668 GALNT7Q86SF2 657 aa14.36□□□□□ -0.11
TCOF1-201ENST00000323668 C17orf64Q86WR6 236 aa14.36□□□□□ -0.11
TCOF1-201ENST00000323668 SLC15A4Q8N697 577 aa14.36□□□□□ -0.11
TCOF1-201ENST00000323668 LINC01465Q8N7H1 131 aa14.36□□□□□ -0.11
TCOF1-201ENST00000323668 MOV10Q9HCE1 1003 aaKnown RBP14.36□□□□□ -0.11
TCOF1-201ENST00000323668 KLHL1Q9NR64 748 aa14.36□□□□□ -0.11
TCOF1-201ENST00000323668 LYVE1Q9Y5Y7 322 aa14.36□□□□□ -0.11
TCOF1-201ENST00000323668 SLC1A7O00341 560 aa14.36□□□□□ -0.11
TCOF1-201ENST00000323668 OPN1SWP03999 348 aa14.36□□□□□ -0.11
TCOF1-201ENST00000323668 NOS3P29474 1203 aa14.36□□□□□ -0.11
TCOF1-201ENST00000323668 DPP6P42658 865 aa14.36□□□□□ -0.11
TCOF1-201ENST00000323668 BMXP51813 675 aa14.36□□□□□ -0.11
TCOF1-201ENST00000323668 SCN1BQ07699 218 aa14.36□□□□□ -0.11
TCOF1-201ENST00000323668 COX10Q12887 443 aa14.36□□□□□ -0.11
TCOF1-201ENST00000323668 HKDC1Q2TB90 917 aa14.36□□□□□ -0.11
TCOF1-201ENST00000323668 FBXO43Q4G163 708 aa14.36□□□□□ -0.11
TCOF1-201ENST00000323668 RFTN2Q52LD8 501 aaPredicted RBP14.36□□□□□ -0.11
TCOF1-201ENST00000323668 FNDC3BQ53EP0 1204 aaKnown RBP14.36□□□□□ -0.11
TCOF1-201ENST00000323668 KIAA0319Q5VV43 1072 aa14.36□□□□□ -0.11
TCOF1-201ENST00000323668 TEX47Q8TBZ9 253 aa14.36□□□□□ -0.11
TCOF1-201ENST00000323668 DIRAS2Q96HU8 199 aa14.36□□□□□ -0.11
TCOF1-201ENST00000323668 CEP295NLQ96MC4 621 aa14.36□□□□□ -0.11
TCOF1-201ENST00000323668 TRIM39Q9HCM9 518 aa14.36□□□□□ -0.11
TCOF1-201ENST00000323668 TMEM45AQ9NWC5 275 aa14.36□□□□□ -0.11
TCOF1-201ENST00000323668 ERVK-18Q9QC07 812 aa14.36□□□□□ -0.11
TCOF1-201ENST00000323668 SPO11Q9Y5K1 396 aa14.36□□□□□ -0.11
TCOF1-201ENST00000323668 PCDH7O60245 1069 aa14.36□□□□□ -0.11
TCOF1-201ENST00000323668 XYLBO75191 536 aa14.36□□□□□ -0.11
TCOF1-201ENST00000323668 PORP16435 677 aaPredicted RBP14.36□□□□□ -0.11
TCOF1-201ENST00000323668 GABARAPL2P60520 117 aa14.36□□□□□ -0.11
TCOF1-201ENST00000323668 NFATC2Q13469 925 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms