RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 PLAGL1Q9UM63 463 aa7.41□□□□□ -1.22
TRIM55-202ENST00000315962 SH3GLB1Q9Y371 365 aa7.41□□□□□ -1.22
TRIM55-202ENST00000315962 RWDD3Q9Y3V2 267 aa7.41□□□□□ -1.22
TRIM55-202ENST00000315962 CARNS1A5YM72 827 aa7.4□□□□□ -1.22
TRIM55-202ENST00000315962 SPINT1O43278 529 aa7.4□□□□□ -1.22
TRIM55-202ENST00000315962 ADAM23O75077 832 aa7.4□□□□□ -1.22
TRIM55-202ENST00000315962 KAT7O95251 611 aa7.4□□□□□ -1.22
TRIM55-202ENST00000315962 GBAP04062 536 aa7.4□□□□□ -1.22
TRIM55-202ENST00000315962 HOXB8P17481 243 aaPredicted RBP7.4□□□□□ -1.22
TRIM55-202ENST00000315962 GPX3P22352 226 aa7.4□□□□□ -1.22
TRIM55-202ENST00000315962 FCARP24071 287 aa7.4□□□□□ -1.22
TRIM55-202ENST00000315962 PSMA4P25789 261 aaKnown RBP7.4□□□□□ -1.22
TRIM55-202ENST00000315962 VIPR1P32241 457 aa7.4□□□□□ -1.22
TRIM55-202ENST00000315962 MTPNP58546 118 aa7.4□□□□□ -1.22
TRIM55-202ENST00000315962 RPL38P63173 70 aaKnown RBP7.4□□□□□ -1.22
TRIM55-202ENST00000315962 MEF2AQ02078 507 aaPredicted RBP7.4□□□□□ -1.22
TRIM55-202ENST00000315962 CNTN1Q12860 1018 aa7.4□□□□□ -1.22
TRIM55-202ENST00000315962 FOXD4Q12950 439 aaPredicted RBP7.4□□□□□ -1.22
TRIM55-202ENST00000315962 RUNX3Q13761 415 aa7.4□□□□□ -1.22
TRIM55-202ENST00000315962 C6orf136Q5SQH8 315 aa7.4□□□□□ -1.22
TRIM55-202ENST00000315962 PPP4R4Q6NUP7 873 aa7.4□□□□□ -1.22
TRIM55-202ENST00000315962 TXNDC11Q6PKC3 985 aa7.4□□□□□ -1.22
TRIM55-202ENST00000315962 SUSD1Q6UWL2 747 aa7.4□□□□□ -1.22
TRIM55-202ENST00000315962 MACC1Q6ZN28 852 aa7.4□□□□□ -1.22
TRIM55-202ENST00000315962 YAF2Q8IY57 180 aa7.4□□□□□ -1.22
TRIM55-202ENST00000315962 KRTCAP2Q8N6L1 136 aa7.4□□□□□ -1.22
TRIM55-202ENST00000315962 TERB1Q8NA31 727 aa7.4□□□□□ -1.22
TRIM55-202ENST00000315962 SUSD6Q92537 303 aa7.4□□□□□ -1.22
TRIM55-202ENST00000315962 PPM1MQ96MI6 270 aa7.4□□□□□ -1.22
TRIM55-202ENST00000315962 LYSMD1Q96S90 227 aa7.4□□□□□ -1.22
TRIM55-202ENST00000315962 FAM129BQ96TA1 746 aa7.4□□□□□ -1.22
TRIM55-202ENST00000315962 CCDC90BQ9GZT6 254 aa7.4□□□□□ -1.22
TRIM55-202ENST00000315962 CD93Q9NPY3 652 aa7.4□□□□□ -1.22
TRIM55-202ENST00000315962 MOSPD1Q9UJG1 213 aa7.4□□□□□ -1.22
TRIM55-202ENST00000315962 ZNF490Q9ULM2 529 aaPredicted RBP7.4□□□□□ -1.22
TRIM55-202ENST00000315962 INVSQ9Y283 1065 aa7.4□□□□□ -1.22
TRIM55-202ENST00000315962 GMEB1Q9Y692 573 aa7.4□□□□□ -1.22
TRIM55-202ENST00000315962 U3KQV3 271 aa7.4□□□□□ -1.22
TRIM55-202ENST00000315962 OBSL1O75147 1896 aa7.4□□□□□ -1.22
TRIM55-202ENST00000315962 IGLON5A6NGN9 336 aa7.4□□□□□ -1.23
TRIM55-202ENST00000315962 PTGES3LE9PB15 166 aa7.4□□□□□ -1.23
TRIM55-202ENST00000315962 WNT9AO14904 365 aa7.4□□□□□ -1.23
TRIM55-202ENST00000315962 MID1O15344 667 aa7.4□□□□□ -1.23
TRIM55-202ENST00000315962 SGTAO43765 313 aa7.4□□□□□ -1.23
TRIM55-202ENST00000315962 SEC22BO75396 215 aa7.4□□□□□ -1.23
TRIM55-202ENST00000315962 STK16O75716 305 aa7.4□□□□□ -1.23
TRIM55-202ENST00000315962 FGF19O95750 216 aa7.4□□□□□ -1.23
TRIM55-202ENST00000315962 MLYCDO95822 493 aa7.4□□□□□ -1.23
TRIM55-202ENST00000315962 CHEK2O96017 543 aa7.4□□□□□ -1.23
TRIM55-202ENST00000315962 HIST1H2AGP0C0S8 130 aaPredicted RBP7.4□□□□□ -1.23
TRIM55-202ENST00000315962 C6P13671 934 aa7.4□□□□□ -1.23
TRIM55-202ENST00000315962 LBPP18428 481 aa7.4□□□□□ -1.23
TRIM55-202ENST00000315962 HIST1H2ADP20671 130 aa7.4□□□□□ -1.23
TRIM55-202ENST00000315962 IGFBP4P22692 258 aa7.4□□□□□ -1.23
TRIM55-202ENST00000315962 SLC6A2P23975 617 aa7.4□□□□□ -1.23
TRIM55-202ENST00000315962 FASP25445 335 aa7.4□□□□□ -1.23
TRIM55-202ENST00000315962 AOAHP28039 575 aa7.4□□□□□ -1.23
TRIM55-202ENST00000315962 IL12AP29459 219 aa7.4□□□□□ -1.23
TRIM55-202ENST00000315962 OPRD1P41143 372 aa7.4□□□□□ -1.23
TRIM55-202ENST00000315962 GSK3BP49841 420 aa7.4□□□□□ -1.23
TRIM55-202ENST00000315962 PHEXP78562 749 aa7.4□□□□□ -1.23
TRIM55-202ENST00000315962 IL1RL1Q01638 556 aa7.4□□□□□ -1.23
TRIM55-202ENST00000315962 ZBED5Q49AG3 693 aa7.4□□□□□ -1.23
TRIM55-202ENST00000315962 SYTL3Q4VX76 610 aa7.4□□□□□ -1.23
TRIM55-202ENST00000315962 ATP6AP1LQ52LC2 224 aa7.4□□□□□ -1.23
TRIM55-202ENST00000315962 KIAA1211LQ6NV74 962 aa7.4□□□□□ -1.23
TRIM55-202ENST00000315962 FAM180BQ6P0A1 224 aa7.4□□□□□ -1.23
TRIM55-202ENST00000315962 NEK5Q6P3R8 708 aa7.4□□□□□ -1.23
TRIM55-202ENST00000315962 BORAQ6PGQ7 559 aa7.4□□□□□ -1.23
TRIM55-202ENST00000315962 SLC2A7Q6PXP3 512 aa7.4□□□□□ -1.23
TRIM55-202ENST00000315962 Q6ZNX1 250 aa7.4□□□□□ -1.23
TRIM55-202ENST00000315962 TRMT11Q7Z4G4 463 aaKnown RBP7.4□□□□□ -1.23
TRIM55-202ENST00000315962 ANKRD46Q86W74 232 aa7.4□□□□□ -1.23
TRIM55-202ENST00000315962 PHYKPLQ8IUZ5 450 aa7.4□□□□□ -1.23
TRIM55-202ENST00000315962 ADGRG5Q8IZF4 528 aa7.4□□□□□ -1.23
TRIM55-202ENST00000315962 MIER2Q8N344 545 aa7.4□□□□□ -1.23
TRIM55-202ENST00000315962 FAM86B1Q8N7N1 296 aa7.4□□□□□ -1.23
TRIM55-202ENST00000315962 FRMD1Q8N878 549 aa7.4□□□□□ -1.23
TRIM55-202ENST00000315962 FLCNQ8NFG4 579 aa7.4□□□□□ -1.23
TRIM55-202ENST00000315962 HIST1H2AHQ96KK5 128 aa7.4□□□□□ -1.23
TRIM55-202ENST00000315962 EGLN2Q96KS0 407 aa7.4□□□□□ -1.23
TRIM55-202ENST00000315962 HIST1H2AJQ99878 128 aa7.4□□□□□ -1.23
TRIM55-202ENST00000315962 H2AFJQ9BTM1 129 aa7.4□□□□□ -1.23
TRIM55-202ENST00000315962 CD244Q9BZW8 370 aa7.4□□□□□ -1.23
TRIM55-202ENST00000315962 CEP44Q9C0F1 390 aa7.4□□□□□ -1.23
TRIM55-202ENST00000315962 SFXN1Q9H9B4 322 aa7.4□□□□□ -1.23
TRIM55-202ENST00000315962 SMURF2Q9HAU4 748 aa7.4□□□□□ -1.23
TRIM55-202ENST00000315962 FZD3Q9NPG1 666 aa7.4□□□□□ -1.23
TRIM55-202ENST00000315962 TBC1D23Q9NUY8 699 aa7.4□□□□□ -1.23
TRIM55-202ENST00000315962 IFT80Q9P2H3 777 aaPredicted RBP7.4□□□□□ -1.23
TRIM55-202ENST00000315962 GULP1Q9UBP9 304 aa7.4□□□□□ -1.23
TRIM55-202ENST00000315962 PTBP2Q9UKA9 531 aaKnown RBP7.4□□□□□ -1.23
TRIM55-202ENST00000315962 POLR3HQ9Y535 204 aaPredicted RBP7.4□□□□□ -1.23
TRIM55-202ENST00000315962 A0A1W2PP55 124 aa7.39□□□□□ -1.23
TRIM55-202ENST00000315962 FUOMA2VDF0 154 aa7.39□□□□□ -1.23
TRIM55-202ENST00000315962 SAP18O00422 153 aaKnown RBP7.39□□□□□ -1.23
TRIM55-202ENST00000315962 PRAMEF4O60810 478 aa7.39□□□□□ -1.23
TRIM55-202ENST00000315962 NFATC1O95644 943 aa7.39□□□□□ -1.23
TRIM55-202ENST00000315962 SLC16A8O95907 504 aa7.39□□□□□ -1.23
TRIM55-202ENST00000315962 C1QCP02747 245 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms