RNA–Protein interactions for RNA: ENST00000310232.10

CCDC13-201, Transcript of coiled-coil domain containing 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC13, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC13-201ENST00000310232 OPN1SWP03999 348 aa13.1□□□□□ -0.31
CCDC13-201ENST00000310232 ADRA2AP08913 450 aa13.1□□□□□ -0.31
CCDC13-201ENST00000310232 IRF1P10914 325 aa13.1□□□□□ -0.31
CCDC13-201ENST00000310232 HTR7P34969 479 aa13.1□□□□□ -0.31
CCDC13-201ENST00000310232 GNPDA1P46926 289 aa13.1□□□□□ -0.31
CCDC13-201ENST00000310232 OR1G1P47890 313 aa13.1□□□□□ -0.31
CCDC13-201ENST00000310232 NRIP1P48552 1158 aa13.1□□□□□ -0.31
CCDC13-201ENST00000310232 MRPL19P49406 292 aaKnown RBP13.1□□□□□ -0.31
CCDC13-201ENST00000310232 TOP3AQ13472 1001 aaPredicted RBP13.1□□□□□ -0.31
CCDC13-201ENST00000310232 ACOX1Q15067 660 aa13.1□□□□□ -0.31
CCDC13-201ENST00000310232 NXNL2Q5VZ03 156 aa13.1□□□□□ -0.31
CCDC13-201ENST00000310232 PTRHD1Q6GMV3 140 aaKnown RBP13.1□□□□□ -0.31
CCDC13-201ENST00000310232 OR2T5Q6IEZ7 315 aa13.1□□□□□ -0.31
CCDC13-201ENST00000310232 CLECL1Q8IZS7 167 aa13.1□□□□□ -0.31
CCDC13-201ENST00000310232 METTL4Q8N3J2 472 aa13.1□□□□□ -0.31
CCDC13-201ENST00000310232 OR2T29Q8NH02 315 aa13.1□□□□□ -0.31
CCDC13-201ENST00000310232 TM6SF2Q9BZW4 377 aa13.1□□□□□ -0.31
CCDC13-201ENST00000310232 REXO4Q9GZR2 422 aaKnown RBP13.1□□□□□ -0.31
CCDC13-201ENST00000310232 GKN1Q9NS71 199 aa13.1□□□□□ -0.31
CCDC13-201ENST00000310232 GPR83Q9NYM4 423 aa13.1□□□□□ -0.31
CCDC13-201ENST00000310232 FAM8A1Q9UBU6 413 aa13.1□□□□□ -0.31
CCDC13-201ENST00000310232 GABRQQ9UN88 632 aa13.1□□□□□ -0.31
CCDC13-201ENST00000310232 ARIH1Q9Y4X5 557 aaPredicted RBP13.1□□□□□ -0.31
CCDC13-201ENST00000310232 TRPV2Q9Y5S1 764 aa13.1□□□□□ -0.31
CCDC13-201ENST00000310232 OTCP00480 354 aa13.1□□□□□ -0.31
CCDC13-201ENST00000310232 S100BP04271 92 aaPredicted RBP13.1□□□□□ -0.31
CCDC13-201ENST00000310232 POU2F1P14859 743 aa13.1□□□□□ -0.31
CCDC13-201ENST00000310232 HUNKP57058 714 aa13.1□□□□□ -0.31
CCDC13-201ENST00000310232 TUSC3Q13454 348 aa13.1□□□□□ -0.31
CCDC13-201ENST00000310232 ZXDCQ2QGD7 858 aaPredicted RBP13.1□□□□□ -0.31
CCDC13-201ENST00000310232 PARP15Q460N3 678 aa13.1□□□□□ -0.31
CCDC13-201ENST00000310232 ZNF404Q494X3 552 aa13.1□□□□□ -0.31
CCDC13-201ENST00000310232 USP39Q53GS9 565 aaKnown RBP13.1□□□□□ -0.31
CCDC13-201ENST00000310232 KDM4DQ6B0I6 523 aa13.1□□□□□ -0.31
CCDC13-201ENST00000310232 SHQ1Q6PI26 577 aaKnown RBP13.1□□□□□ -0.31
CCDC13-201ENST00000310232 CCBE1Q6UXH8 406 aaPredicted RBP13.1□□□□□ -0.31
CCDC13-201ENST00000310232 ZNF467Q7Z7K2 595 aaPredicted RBP13.1□□□□□ -0.31
CCDC13-201ENST00000310232 HIPK1Q86Z02 1210 aa13.1□□□□□ -0.31
CCDC13-201ENST00000310232 DENND1CQ8IV53 801 aa13.1□□□□□ -0.31
CCDC13-201ENST00000310232 PARP16Q8N5Y8 322 aa13.1□□□□□ -0.31
CCDC13-201ENST00000310232 FBLIM1Q8WUP2 373 aa13.1□□□□□ -0.31
CCDC13-201ENST00000310232 WBP2Q969T9 261 aa13.1□□□□□ -0.31
CCDC13-201ENST00000310232 ULK4Q96C45 1275 aa13.1□□□□□ -0.31
CCDC13-201ENST00000310232 KCNS3Q9BQ31 491 aa13.1□□□□□ -0.31
CCDC13-201ENST00000310232 MGME1Q9BQP7 344 aa13.1□□□□□ -0.31
CCDC13-201ENST00000310232 TTPALQ9BTX7 342 aa13.1□□□□□ -0.31
CCDC13-201ENST00000310232 PARVBQ9HBI1 364 aa13.1□□□□□ -0.31
CCDC13-201ENST00000310232 LATS2Q9NRM7 1088 aa13.1□□□□□ -0.31
CCDC13-201ENST00000310232 TRMT13Q9NUP7 481 aaKnown RBP13.1□□□□□ -0.31
CCDC13-201ENST00000310232 RNF181Q9P0P0 153 aa13.1□□□□□ -0.31
CCDC13-201ENST00000310232 UBA2Q9UBT2 640 aaPredicted RBP13.1□□□□□ -0.31
CCDC13-201ENST00000310232 TLL1O43897 1013 aa13.09□□□□□ -0.31
CCDC13-201ENST00000310232 SLC25A14O95258 325 aaPredicted RBP13.09□□□□□ -0.31
CCDC13-201ENST00000310232 GJB5O95377 273 aa13.09□□□□□ -0.31
CCDC13-201ENST00000310232 CPSF4O95639 269 aaKnown RBP13.09□□□□□ -0.31
CCDC13-201ENST00000310232 SLC10A3P09131 477 aa13.09□□□□□ -0.31
CCDC13-201ENST00000310232 ACPPP15309 386 aa13.09□□□□□ -0.31
CCDC13-201ENST00000310232 PTPN6P29350 595 aa13.09□□□□□ -0.31
CCDC13-201ENST00000310232 TGM4P49221 684 aa13.09□□□□□ -0.31
CCDC13-201ENST00000310232 TTPAP49638 278 aa13.09□□□□□ -0.31
CCDC13-201ENST00000310232 GNASQ5JWF2 1037 aa13.09□□□□□ -0.31
CCDC13-201ENST00000310232 CAPN13Q6MZZ7 669 aaPredicted RBP13.09□□□□□ -0.31
CCDC13-201ENST00000310232 GDPD3Q7L5L3 318 aa13.09□□□□□ -0.31
CCDC13-201ENST00000310232 SNX20Q7Z614 316 aa13.09□□□□□ -0.31
CCDC13-201ENST00000310232 SLC16A10Q8TF71 515 aa13.09□□□□□ -0.31
CCDC13-201ENST00000310232 TRIB2Q92519 343 aa13.09□□□□□ -0.31
CCDC13-201ENST00000310232 KCNJ9Q92806 393 aa13.09□□□□□ -0.31
CCDC13-201ENST00000310232 APIPQ96GX9 242 aa13.09□□□□□ -0.31
CCDC13-201ENST00000310232 PPP3R2Q96LZ3 170 aa13.09□□□□□ -0.31
CCDC13-201ENST00000310232 TRIM62Q9BVG3 475 aa13.09□□□□□ -0.31
CCDC13-201ENST00000310232 RLIMQ9NVW2 624 aa13.09□□□□□ -0.31
CCDC13-201ENST00000310232 KLHL3Q9UH77 587 aa13.09□□□□□ -0.31
CCDC13-201ENST00000310232 FAM47E-STBD1D6RA91 191 aa13.09□□□□□ -0.31
CCDC13-201ENST00000310232 K7ERQ8 282 aa13.09□□□□□ -0.31
CCDC13-201ENST00000310232 M0QX08 132 aa13.09□□□□□ -0.31
CCDC13-201ENST00000310232 RAD51BO15315 384 aa13.09□□□□□ -0.31
CCDC13-201ENST00000310232 RGS14O43566 566 aa13.09□□□□□ -0.31
CCDC13-201ENST00000310232 CASP3P42574 277 aa13.09□□□□□ -0.31
CCDC13-201ENST00000310232 IDH2P48735 452 aaKnown RBP13.09□□□□□ -0.31
CCDC13-201ENST00000310232 TPRG1LQ5T0D9 272 aa13.09□□□□□ -0.31
CCDC13-201ENST00000310232 RSBN1Q5VWQ0 802 aaPredicted RBP13.09□□□□□ -0.31
CCDC13-201ENST00000310232 HORMAD1Q86X24 394 aa13.09□□□□□ -0.31
CCDC13-201ENST00000310232 FAM217AQ8IXS0 508 aa13.09□□□□□ -0.31
CCDC13-201ENST00000310232 HSH2DQ96JZ2 352 aa13.09□□□□□ -0.31
CCDC13-201ENST00000310232 SUSD3Q96L08 255 aa13.09□□□□□ -0.31
CCDC13-201ENST00000310232 APOLD1Q96LR9 279 aa13.09□□□□□ -0.31
CCDC13-201ENST00000310232 COPS4Q9BT78 406 aa13.09□□□□□ -0.31
CCDC13-201ENST00000310232 CDADC1Q9BWV3 514 aa13.09□□□□□ -0.31
CCDC13-201ENST00000310232 AP5M1Q9H0R1 490 aa13.09□□□□□ -0.31
CCDC13-201ENST00000310232 THG1LQ9NWX6 298 aaKnown RBP13.09□□□□□ -0.31
CCDC13-201ENST00000310232 NUDT4Q9NZJ9 180 aa13.09□□□□□ -0.31
CCDC13-201ENST00000310232 MBD1Q9UIS9 605 aaPredicted RBP13.09□□□□□ -0.31
CCDC13-201ENST00000310232 FCF1Q9Y324 198 aaKnown RBP13.09□□□□□ -0.31
CCDC13-201ENST00000310232 PCDHGB1Q9Y5G3 927 aa13.09□□□□□ -0.31
CCDC13-201ENST00000310232 PABPN1LA6NDY0 278 aaKnown RBP13.09□□□□□ -0.31
CCDC13-201ENST00000310232 YY2O15391 372 aa13.09□□□□□ -0.31
CCDC13-201ENST00000310232 NTRK1P04629 796 aa13.09□□□□□ -0.31
CCDC13-201ENST00000310232 STSP08842 583 aa13.09□□□□□ -0.31
CCDC13-201ENST00000310232 HOXB8P17481 243 aaPredicted RBP13.09□□□□□ -0.31
CCDC13-201ENST00000310232 PCBP2Q15366 365 aaKnown RBP eCLIP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms