RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 PQLC1Q8N2U9 271 aa20.6■□□□□ 0.89
ATG4D-201ENST00000309469 RNF175Q8N4F7 328 aa20.6■□□□□ 0.89
ATG4D-201ENST00000309469 KRTCAP2Q8N6L1 136 aa20.6■□□□□ 0.89
ATG4D-201ENST00000309469 SGPP1Q9BX95 441 aa20.6■□□□□ 0.89
ATG4D-201ENST00000309469 SLC17A9Q9BYT1 436 aa20.6■□□□□ 0.89
ATG4D-201ENST00000309469 CLMPQ9H6B4 373 aa20.6■□□□□ 0.89
ATG4D-201ENST00000309469 C8orf33Q9H7E9 229 aaPredicted RBP20.6■□□□□ 0.89
ATG4D-201ENST00000309469 PHPT1Q9NRX4 125 aaPredicted RBP20.6■□□□□ 0.89
ATG4D-201ENST00000309469 C6orf203Q9P0P8 240 aaPredicted RBP20.6■□□□□ 0.89
ATG4D-201ENST00000309469 ASF1AQ9Y294 204 aa20.6■□□□□ 0.89
ATG4D-201ENST00000309469 STAMBPO95630 424 aa20.59■□□□□ 0.89
ATG4D-201ENST00000309469 NPPBP16860 134 aa20.59■□□□□ 0.89
ATG4D-201ENST00000309469 MAPK1P28482 360 aa20.59■□□□□ 0.89
ATG4D-201ENST00000309469 RHDQ02161 417 aa20.59■□□□□ 0.89
ATG4D-201ENST00000309469 GRSF1Q12849 480 aaKnown RBP eCLIP20.59■□□□□ 0.89
ATG4D-201ENST00000309469 E2F2Q14209 437 aa20.59■□□□□ 0.89
ATG4D-201ENST00000309469 RABL3Q5HYI8 236 aa20.59■□□□□ 0.89
ATG4D-201ENST00000309469 METRNLQ641Q3 311 aa20.59■□□□□ 0.89
ATG4D-201ENST00000309469 NANOGP8Q6NSW7 305 aa20.59■□□□□ 0.89
ATG4D-201ENST00000309469 SLCO4C1Q6ZQN7 724 aa20.59■□□□□ 0.89
ATG4D-201ENST00000309469 PRR23BQ6ZRT6 265 aa20.59■□□□□ 0.89
ATG4D-201ENST00000309469 KBTBD2Q8IY47 623 aa20.59■□□□□ 0.89
ATG4D-201ENST00000309469 LRRC56Q8IYG6 542 aaPredicted RBP20.59■□□□□ 0.89
ATG4D-201ENST00000309469 NEIL2Q969S2 332 aa20.59■□□□□ 0.89
ATG4D-201ENST00000309469 TRIM8Q9BZR9 551 aa20.59■□□□□ 0.89
ATG4D-201ENST00000309469 NANOGQ9H9S0 305 aa20.59■□□□□ 0.89
ATG4D-201ENST00000309469 SGK2Q9HBY8 427 aa20.59■□□□□ 0.89
ATG4D-201ENST00000309469 XIRP2A4UGR9 3374 aa20.59■□□□□ 0.89
ATG4D-201ENST00000309469 C15orf38-AP3S2A0A0A6YYH1 394 aa20.59■□□□□ 0.89
ATG4D-201ENST00000309469 C2CD4DB7Z1M9 353 aa20.59■□□□□ 0.89
ATG4D-201ENST00000309469 H3BQ06 376 aaPredicted RBP20.59■□□□□ 0.89
ATG4D-201ENST00000309469 CASQ2O14958 399 aaPredicted RBP20.59■□□□□ 0.89
ATG4D-201ENST00000309469 IL6P05231 212 aa20.59■□□□□ 0.89
ATG4D-201ENST00000309469 ACPPP15309 386 aa20.59■□□□□ 0.89
ATG4D-201ENST00000309469 AMD1P17707 334 aa20.59■□□□□ 0.89
ATG4D-201ENST00000309469 PNLIPRP1P54315 467 aa20.59■□□□□ 0.89
ATG4D-201ENST00000309469 ADPRHP54922 357 aa20.59■□□□□ 0.89
ATG4D-201ENST00000309469 CLDN8P56748 225 aa20.59■□□□□ 0.89
ATG4D-201ENST00000309469 TAP2Q03519 686 aa20.59■□□□□ 0.89
ATG4D-201ENST00000309469 BNIP2Q12982 314 aa20.59■□□□□ 0.89
ATG4D-201ENST00000309469 PWP1Q13610 501 aa20.59■□□□□ 0.89
ATG4D-201ENST00000309469 FAM174BQ3ZCQ3 159 aa20.59■□□□□ 0.89
ATG4D-201ENST00000309469 COL13A1Q5TAT6 717 aaPredicted RBP20.59■□□□□ 0.89
ATG4D-201ENST00000309469 ARPINQ7Z6K5 226 aa20.59■□□□□ 0.89
ATG4D-201ENST00000309469 HID1Q8IV36 788 aa20.59■□□□□ 0.89
ATG4D-201ENST00000309469 FAM9CQ8IZT9 166 aa20.59■□□□□ 0.89
ATG4D-201ENST00000309469 PHC3Q8NDX5 983 aa20.59■□□□□ 0.89
ATG4D-201ENST00000309469 CLHC1Q8NHS4 586 aa20.59■□□□□ 0.89
ATG4D-201ENST00000309469 SLC13A3Q8WWT9 602 aa20.59■□□□□ 0.89
ATG4D-201ENST00000309469 TFGQ92734 400 aaPredicted RBP20.59■□□□□ 0.89
ATG4D-201ENST00000309469 N4BP2L2Q92802 583 aaPredicted RBP20.59■□□□□ 0.89
ATG4D-201ENST00000309469 RAD51AP1Q96B01 352 aa20.59■□□□□ 0.89
ATG4D-201ENST00000309469 SPATA6Q9NWH7 488 aaPredicted RBP20.59■□□□□ 0.89
ATG4D-201ENST00000309469 DYRK1BQ9Y463 629 aa20.59■□□□□ 0.89
ATG4D-201ENST00000309469 PCDHGA11Q9Y5H2 935 aa20.59■□□□□ 0.89
ATG4D-201ENST00000309469 PRSS51A0A1B0GVH4 220 aa20.58■□□□□ 0.88
ATG4D-201ENST00000309469 PCSK2P16519 638 aa20.58■□□□□ 0.88
ATG4D-201ENST00000309469 IGFBP4P22692 258 aa20.58■□□□□ 0.88
ATG4D-201ENST00000309469 MRPS21P82921 87 aaKnown RBP20.58■□□□□ 0.88
ATG4D-201ENST00000309469 TSTA3Q13630 321 aaPredicted RBP20.58■□□□□ 0.88
ATG4D-201ENST00000309469 IZUMO2Q6UXV1 221 aa20.58■□□□□ 0.88
ATG4D-201ENST00000309469 CYP2R1Q6VVX0 501 aa20.58■□□□□ 0.88
ATG4D-201ENST00000309469 HORMAD1Q86X24 394 aa20.58■□□□□ 0.88
ATG4D-201ENST00000309469 SLC44A3Q8N4M1 653 aa20.58■□□□□ 0.88
ATG4D-201ENST00000309469 LMNTD1Q8N9Z9 388 aa20.58■□□□□ 0.88
ATG4D-201ENST00000309469 OR5AR1Q8NGP9 310 aa20.58■□□□□ 0.88
ATG4D-201ENST00000309469 ZUFSPQ96AP4 578 aa20.58■□□□□ 0.88
ATG4D-201ENST00000309469 APOLD1Q96LR9 279 aa20.58■□□□□ 0.88
ATG4D-201ENST00000309469 LRGUKQ96M69 825 aa20.58■□□□□ 0.88
ATG4D-201ENST00000309469 MTERF1Q99551 399 aaKnown RBP20.58■□□□□ 0.88
ATG4D-201ENST00000309469 VCX3BQ9H321 246 aa20.58■□□□□ 0.88
ATG4D-201ENST00000309469 VPS29Q9UBQ0 182 aa20.58■□□□□ 0.88
ATG4D-201ENST00000309469 SCML1Q9UN30 329 aa20.58■□□□□ 0.88
ATG4D-201ENST00000309469 LRCH1Q9Y2L9 728 aa20.58■□□□□ 0.88
ATG4D-201ENST00000309469 SZT2Q5T011 3432 aa20.57■□□□□ 0.88
ATG4D-201ENST00000309469 TBC1D3DA0A087WVF3 549 aa20.57■□□□□ 0.88
ATG4D-201ENST00000309469 TBC1D3IA0A087WXS9 549 aa20.57■□□□□ 0.88
ATG4D-201ENST00000309469 TBC1D3EA0A087X179 549 aa20.57■□□□□ 0.88
ATG4D-201ENST00000309469 TBC1D3KA0A087X1G2 549 aa20.57■□□□□ 0.88
ATG4D-201ENST00000309469 TCRBV3S1A0A5B6 114 aa20.57■□□□□ 0.88
ATG4D-201ENST00000309469 KLHL33A6NCF5 533 aa20.57■□□□□ 0.88
ATG4D-201ENST00000309469 TBC1D3FA6NER0 549 aaPredicted RBP20.57■□□□□ 0.88
ATG4D-201ENST00000309469 TBC1D3LB9A6J9 549 aa20.57■□□□□ 0.88
ATG4D-201ENST00000309469 TBC1D3HP0C7X1 549 aa20.57■□□□□ 0.88
ATG4D-201ENST00000309469 MYCLP1P12525 358 aaPredicted RBP20.57■□□□□ 0.88
ATG4D-201ENST00000309469 SDC1P18827 310 aa20.57■□□□□ 0.88
ATG4D-201ENST00000309469 POU3F3P20264 500 aaPredicted RBP20.57■□□□□ 0.88
ATG4D-201ENST00000309469 KELP23276 732 aa20.57■□□□□ 0.88
ATG4D-201ENST00000309469 EEFSECP57772 596 aaKnown RBP20.57■□□□□ 0.88
ATG4D-201ENST00000309469 LIPEQ05469 1076 aa20.57■□□□□ 0.88
ATG4D-201ENST00000309469 SPANXN4Q5MJ08 99 aa20.57■□□□□ 0.88
ATG4D-201ENST00000309469 LPCAT4Q643R3 524 aa20.57■□□□□ 0.88
ATG4D-201ENST00000309469 TBC1D3GQ6DHY5 549 aa20.57■□□□□ 0.88
ATG4D-201ENST00000309469 TBC1D3CQ6IPX1 549 aa20.57■□□□□ 0.88
ATG4D-201ENST00000309469 NOXRED1Q6NXP6 359 aa20.57■□□□□ 0.88
ATG4D-201ENST00000309469 TBC1D3Q8IZP1 549 aaPredicted RBP20.57■□□□□ 0.88
ATG4D-201ENST00000309469 SIPA1Q96FS4 1042 aa20.57■□□□□ 0.88
ATG4D-201ENST00000309469 C1QTNF7Q9BXJ2 289 aa20.57■□□□□ 0.88
ATG4D-201ENST00000309469 TTYH1Q9H313 450 aaPredicted RBP20.57■□□□□ 0.88
ATG4D-201ENST00000309469 KCNK12Q9HB15 430 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms