RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 IGKV1-8A0A0C4DH67 115 aa19.01■□□□□ 0.63
PDZRN3-202ENST00000308537 OR2A25A4D2G3 310 aa19.01■□□□□ 0.63
PDZRN3-202ENST00000308537 CTAGE9A4FU28 777 aa19.01■□□□□ 0.63
PDZRN3-202ENST00000308537 FITM1A5D6W6 292 aa19.01■□□□□ 0.63
PDZRN3-202ENST00000308537 TARM1B6A8C7 271 aa19.01■□□□□ 0.63
PDZRN3-202ENST00000308537 PFDN6O15212 129 aa19.01■□□□□ 0.63
PDZRN3-202ENST00000308537 PGAM1P18669 254 aa19.01■□□□□ 0.63
PDZRN3-202ENST00000308537 CUL1Q13616 776 aa19.01■□□□□ 0.63
PDZRN3-202ENST00000308537 KCNMB4Q86W47 210 aa19.01■□□□□ 0.63
PDZRN3-202ENST00000308537 CNTN4Q8IWV2 1026 aa19.01■□□□□ 0.63
PDZRN3-202ENST00000308537 DTWD1Q8N5C7 304 aa19.01■□□□□ 0.63
PDZRN3-202ENST00000308537 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.01■□□□□ 0.63
PDZRN3-202ENST00000308537 C2CD4AQ8NCU7 369 aaPredicted RBP19.01■□□□□ 0.63
PDZRN3-202ENST00000308537 SKA2Q8WVK7 121 aaPredicted RBP19.01■□□□□ 0.63
PDZRN3-202ENST00000308537 ASB11Q8WXH4 323 aa19.01■□□□□ 0.63
PDZRN3-202ENST00000308537 ZUFSPQ96AP4 578 aa19.01■□□□□ 0.63
PDZRN3-202ENST00000308537 CAPZA3Q96KX2 299 aa19.01■□□□□ 0.63
PDZRN3-202ENST00000308537 PKP4Q99569 1192 aa19.01■□□□□ 0.63
PDZRN3-202ENST00000308537 GPR21Q99679 349 aa19.01■□□□□ 0.63
PDZRN3-202ENST00000308537 MIPEPQ99797 713 aa19.01■□□□□ 0.63
PDZRN3-202ENST00000308537 EBNA1BP2Q99848 306 aaKnown RBP19.01■□□□□ 0.63
PDZRN3-202ENST00000308537 AARSD1Q9BTE6 412 aaKnown RBP19.01■□□□□ 0.63
PDZRN3-202ENST00000308537 DHRS4Q9BTZ2 278 aa19.01■□□□□ 0.63
PDZRN3-202ENST00000308537 SLC6A20Q9NP91 592 aa19.01■□□□□ 0.63
PDZRN3-202ENST00000308537 ASIC3Q9UHC3 531 aa19.01■□□□□ 0.63
PDZRN3-202ENST00000308537 SRPK3Q9UPE1 567 aa19.01■□□□□ 0.63
PDZRN3-202ENST00000308537 LRRK2Q5S007 2527 aa19■□□□□ 0.63
PDZRN3-202ENST00000308537 ARGFXA6NJG6 315 aa19■□□□□ 0.63
PDZRN3-202ENST00000308537 GFYI3L273 518 aa19■□□□□ 0.63
PDZRN3-202ENST00000308537 WISP1O95388 367 aa19■□□□□ 0.63
PDZRN3-202ENST00000308537 GNG11P61952 73 aa19■□□□□ 0.63
PDZRN3-202ENST00000308537 TLE1Q04724 770 aa19■□□□□ 0.63
PDZRN3-202ENST00000308537 FRMPD2BQ6IN97 320 aa19■□□□□ 0.63
PDZRN3-202ENST00000308537 TTC23LQ6PF05 361 aa19■□□□□ 0.63
PDZRN3-202ENST00000308537 COX15Q7KZN9 410 aa19■□□□□ 0.63
PDZRN3-202ENST00000308537 RNF44Q7L0R7 432 aa19■□□□□ 0.63
PDZRN3-202ENST00000308537 GSDMBQ8TAX9 411 aa19■□□□□ 0.63
PDZRN3-202ENST00000308537 DLG3Q92796 817 aa19■□□□□ 0.63
PDZRN3-202ENST00000308537 FOPNLQ96NB1 174 aa19■□□□□ 0.63
PDZRN3-202ENST00000308537 ING2Q9H160 280 aa19■□□□□ 0.63
PDZRN3-202ENST00000308537 IARS2Q9NSE4 1012 aaKnown RBP19■□□□□ 0.63
PDZRN3-202ENST00000308537 SLC17A6Q9P2U8 582 aa19■□□□□ 0.63
PDZRN3-202ENST00000308537 ANAPC2Q9UJX6 822 aa19■□□□□ 0.63
PDZRN3-202ENST00000308537 RP1L1Q8IWN7 2480 aaPredicted RBP19■□□□□ 0.63
PDZRN3-202ENST00000308537 E5RI56 91 aa18.99■□□□□ 0.63
PDZRN3-202ENST00000308537 MKRN2OSH3BPM6 223 aa18.99■□□□□ 0.63
PDZRN3-202ENST00000308537 UMODP07911 640 aa18.99■□□□□ 0.63
PDZRN3-202ENST00000308537 MPC1LP0DKB6 136 aa18.99■□□□□ 0.63
PDZRN3-202ENST00000308537 ERVK-10P10266 1014 aa18.99■□□□□ 0.63
PDZRN3-202ENST00000308537 AGXTP21549 392 aa18.99■□□□□ 0.63
PDZRN3-202ENST00000308537 CASRP41180 1078 aa18.99■□□□□ 0.63
PDZRN3-202ENST00000308537 DCDP81605 110 aaKnown RBP18.99■□□□□ 0.63
PDZRN3-202ENST00000308537 NKAIN1Q4KMZ8 207 aa18.99■□□□□ 0.63
PDZRN3-202ENST00000308537 COLEC12Q5KU26 742 aa18.99■□□□□ 0.63
PDZRN3-202ENST00000308537 HIBCHQ6NVY1 386 aaPredicted RBP18.99■□□□□ 0.63
PDZRN3-202ENST00000308537 SUSD1Q6UWL2 747 aa18.99■□□□□ 0.63
PDZRN3-202ENST00000308537 CALML6Q8TD86 181 aa18.99■□□□□ 0.63
PDZRN3-202ENST00000308537 MAGEC3Q8TD91 643 aa18.99■□□□□ 0.63
PDZRN3-202ENST00000308537 ZNF480Q8WV37 535 aa18.99■□□□□ 0.63
PDZRN3-202ENST00000308537 N4BP2L2Q92802 583 aaPredicted RBP18.99■□□□□ 0.63
PDZRN3-202ENST00000308537 NAPGQ99747 312 aaPredicted RBP18.99■□□□□ 0.63
PDZRN3-202ENST00000308537 TRIM51Q9BSJ1 452 aa18.99■□□□□ 0.63
PDZRN3-202ENST00000308537 SLC7A5P2Q9GIP4 190 aa18.99■□□□□ 0.63
PDZRN3-202ENST00000308537 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.99■□□□□ 0.63
PDZRN3-202ENST00000308537 PCDHGA9Q9Y5G4 932 aaKnown RBP18.99■□□□□ 0.63
PDZRN3-202ENST00000308537 COMMD10Q9Y6G5 202 aa18.99■□□□□ 0.63
PDZRN3-202ENST00000308537 HECTD1Q9ULT8 2610 aa18.99■□□□□ 0.63
PDZRN3-202ENST00000308537 LOC105369274A0A096LPK9 316 aa18.98■□□□□ 0.63
PDZRN3-202ENST00000308537 LOC102723532A0A0G2JNH3 316 aa18.98■□□□□ 0.63
PDZRN3-202ENST00000308537 C9J4A7 227 aa18.98■□□□□ 0.63
PDZRN3-202ENST00000308537 E7ENX8 843 aa18.98■□□□□ 0.63
PDZRN3-202ENST00000308537 SLC16A8O95907 504 aa18.98■□□□□ 0.63
PDZRN3-202ENST00000308537 SKIV2L2P42285 1042 aaKnown RBP18.98■□□□□ 0.63
PDZRN3-202ENST00000308537 TAP2Q03519 686 aa18.98■□□□□ 0.63
PDZRN3-202ENST00000308537 ATP1A4Q13733 1029 aa18.98■□□□□ 0.63
PDZRN3-202ENST00000308537 SLC9A5Q14940 896 aa18.98■□□□□ 0.63
PDZRN3-202ENST00000308537 ARHGAP19Q14CB8 494 aa18.98■□□□□ 0.63
PDZRN3-202ENST00000308537 MORF4L2Q15014 288 aa18.98■□□□□ 0.63
PDZRN3-202ENST00000308537 RBM20Q5T481 1227 aaKnown RBP18.98■□□□□ 0.63
PDZRN3-202ENST00000308537 ZNF425Q6IV72 752 aa18.98■□□□□ 0.63
PDZRN3-202ENST00000308537 FBXO42Q6P3S6 717 aa18.98■□□□□ 0.63
PDZRN3-202ENST00000308537 PIWIL4Q7Z3Z4 852 aaKnown RBP18.98■□□□□ 0.63
PDZRN3-202ENST00000308537 KLHL7Q8IXQ5 586 aa18.98■□□□□ 0.63
PDZRN3-202ENST00000308537 CPNE9Q8IYJ1 553 aa18.98■□□□□ 0.63
PDZRN3-202ENST00000308537 OR4N4Q8N0Y3 316 aa18.98■□□□□ 0.63
PDZRN3-202ENST00000308537 OR2Y1Q8NGV0 311 aa18.98■□□□□ 0.63
PDZRN3-202ENST00000308537 ZDHHC19Q8WVZ1 309 aaPredicted RBP18.98■□□□□ 0.63
PDZRN3-202ENST00000308537 INPP5DQ92835 1189 aa18.98■□□□□ 0.63
PDZRN3-202ENST00000308537 FAM167BQ9BTA0 163 aa18.98■□□□□ 0.63
PDZRN3-202ENST00000308537 INTS7Q9NVH2 962 aaKnown RBP18.98■□□□□ 0.63
PDZRN3-202ENST00000308537 SAR1BQ9Y6B6 198 aa18.98■□□□□ 0.63
PDZRN3-202ENST00000308537 TEX264Q9Y6I9 313 aa18.98■□□□□ 0.63
PDZRN3-202ENST00000308537 SHANK1Q9Y566 2161 aa18.98■□□□□ 0.63
PDZRN3-202ENST00000308537 USP9XQ93008 2570 aaPredicted RBP18.97■□□□□ 0.63
PDZRN3-202ENST00000308537 A0A1B0GX78 115 aa18.97■□□□□ 0.63
PDZRN3-202ENST00000308537 TTI1O43156 1089 aa18.97■□□□□ 0.63
PDZRN3-202ENST00000308537 TTC4O95801 387 aa18.97■□□□□ 0.63
PDZRN3-202ENST00000308537 AHSGP02765 367 aa18.97■□□□□ 0.63
PDZRN3-202ENST00000308537 CATP04040 527 aaKnown RBP18.97■□□□□ 0.63
PDZRN3-202ENST00000308537 ENO3P13929 434 aaPredicted RBP18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms