RNA–Protein interactions for RNA: ENST00000307106.3

SMIM4-201, Transcript of small integral membrane protein 4, humanhuman

TSL 2 BASIC

Gene SMIM4, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-201ENST00000307106 INTS7Q9NVH2 962 aaKnown RBP11.25□□□□□ -0.61
SMIM4-201ENST00000307106 DNAJB12Q9NXW2 375 aaKnown RBP11.25□□□□□ -0.61
SMIM4-201ENST00000307106 ST6GALNAC2Q9UJ37 374 aa11.25□□□□□ -0.61
SMIM4-201ENST00000307106 ZNF407Q9C0G0 2248 aa11.25□□□□□ -0.61
SMIM4-201ENST00000307106 FN1P02751 2386 aaKnown RBP11.24□□□□□ -0.61
SMIM4-201ENST00000307106 LRRD1A4D1F6 860 aa11.24□□□□□ -0.61
SMIM4-201ENST00000307106 A8MUI8 341 aa11.24□□□□□ -0.61
SMIM4-201ENST00000307106 KDM1AO60341 852 aa11.24□□□□□ -0.61
SMIM4-201ENST00000307106 PROSCO94903 275 aa11.24□□□□□ -0.61
SMIM4-201ENST00000307106 AP2A1O95782 977 aa11.24□□□□□ -0.61
SMIM4-201ENST00000307106 HOXD4P09016 255 aaPredicted RBP11.24□□□□□ -0.61
SMIM4-201ENST00000307106 ICAM2P13598 275 aa11.24□□□□□ -0.61
SMIM4-201ENST00000307106 FBLP22087 321 aaKnown RBP11.24□□□□□ -0.61
SMIM4-201ENST00000307106 VSX2P58304 361 aaPredicted RBP11.24□□□□□ -0.61
SMIM4-201ENST00000307106 MPP3Q13368 585 aa11.24□□□□□ -0.61
SMIM4-201ENST00000307106 WASHC2DQ5SRD0 308 aa11.24□□□□□ -0.61
SMIM4-201ENST00000307106 FIGLAQ6QHK4 219 aa11.24□□□□□ -0.61
SMIM4-201ENST00000307106 CEP128Q6ZU80 1094 aa11.24□□□□□ -0.61
SMIM4-201ENST00000307106 SNX20Q7Z614 316 aa11.24□□□□□ -0.61
SMIM4-201ENST00000307106 SIAH3Q8IW03 269 aa11.24□□□□□ -0.61
SMIM4-201ENST00000307106 CHERPQ8IWX8 916 aaKnown RBP11.24□□□□□ -0.61
SMIM4-201ENST00000307106 BEST3Q8N1M1 668 aa11.24□□□□□ -0.61
SMIM4-201ENST00000307106 CLDN19Q8N6F1 224 aa11.24□□□□□ -0.61
SMIM4-201ENST00000307106 MDS2Q8NDY4 140 aa11.24□□□□□ -0.61
SMIM4-201ENST00000307106 ASB5Q8WWX0 329 aa11.24□□□□□ -0.61
SMIM4-201ENST00000307106 FCRL5Q96RD9 977 aa11.24□□□□□ -0.61
SMIM4-201ENST00000307106 FSD1LQ9BXM9 530 aa11.24□□□□□ -0.61
SMIM4-201ENST00000307106 MAK16Q9BXY0 300 aaKnown RBP11.24□□□□□ -0.61
SMIM4-201ENST00000307106 UCK2Q9BZX2 261 aa11.24□□□□□ -0.61
SMIM4-201ENST00000307106 ZNF700Q9H0M5 742 aa11.24□□□□□ -0.61
SMIM4-201ENST00000307106 LIME1Q9H400 295 aa11.24□□□□□ -0.61
SMIM4-201ENST00000307106 LUC7LQ9NQ29 371 aaKnown RBP11.24□□□□□ -0.61
SMIM4-201ENST00000307106 ZDHHC3Q9NYG2 299 aa11.24□□□□□ -0.61
SMIM4-201ENST00000307106 KLHL8Q9P2G9 620 aaPredicted RBP11.24□□□□□ -0.61
SMIM4-201ENST00000307106 ASB1Q9Y576 335 aa11.24□□□□□ -0.61
SMIM4-201ENST00000307106 JMJD1CQ15652 2540 aa11.24□□□□□ -0.61
SMIM4-201ENST00000307106 MPDZO75970 2070 aa11.23□□□□□ -0.61
SMIM4-201ENST00000307106 IGLV3-16A0A075B6K0 115 aa11.23□□□□□ -0.61
SMIM4-201ENST00000307106 LOC102723996A0A087X1L8 192 aa11.23□□□□□ -0.61
SMIM4-201ENST00000307106 RCCD1A6NED2 376 aa11.23□□□□□ -0.61
SMIM4-201ENST00000307106 C5orf60A6NFR6 353 aa11.23□□□□□ -0.61
SMIM4-201ENST00000307106 KIAA1324LA8MWY0 1029 aaPredicted RBP11.23□□□□□ -0.61
SMIM4-201ENST00000307106 ZNF487B1APH4 448 aa11.23□□□□□ -0.61
SMIM4-201ENST00000307106 FFAR3O14843 346 aa11.23□□□□□ -0.61
SMIM4-201ENST00000307106 LIN7AO14910 233 aaPredicted RBP11.23□□□□□ -0.61
SMIM4-201ENST00000307106 GPR42O15529 346 aa11.23□□□□□ -0.61
SMIM4-201ENST00000307106 SRPX2O60687 465 aaPredicted RBP11.23□□□□□ -0.61
SMIM4-201ENST00000307106 TOXO94900 526 aa11.23□□□□□ -0.61
SMIM4-201ENST00000307106 HEXBP07686 556 aa11.23□□□□□ -0.61
SMIM4-201ENST00000307106 GSTM1P09488 218 aa11.23□□□□□ -0.61
SMIM4-201ENST00000307106 PKLRP30613 574 aa11.23□□□□□ -0.61
SMIM4-201ENST00000307106 CHRNB4P30926 498 aa11.23□□□□□ -0.61
SMIM4-201ENST00000307106 GSTM4Q03013 218 aa11.23□□□□□ -0.61
SMIM4-201ENST00000307106 WASHC5Q12768 1159 aa11.23□□□□□ -0.61
SMIM4-201ENST00000307106 TUBA3CQ13748 450 aa11.23□□□□□ -0.61
SMIM4-201ENST00000307106 BRD3Q15059 726 aa11.23□□□□□ -0.61
SMIM4-201ENST00000307106 TMEM198Q66K66 360 aa11.23□□□□□ -0.61
SMIM4-201ENST00000307106 TUBA3EQ6PEY2 450 aa11.23□□□□□ -0.61
SMIM4-201ENST00000307106 TAX1BP1Q86VP1 789 aa11.23□□□□□ -0.61
SMIM4-201ENST00000307106 PRIMA1Q86XR5 153 aa11.23□□□□□ -0.61
SMIM4-201ENST00000307106 C2orf73Q8N5S3 287 aaPredicted RBP11.23□□□□□ -0.61
SMIM4-201ENST00000307106 LMNTD1Q8N9Z9 388 aa11.23□□□□□ -0.61
SMIM4-201ENST00000307106 LINC01555Q8NAE3 123 aa11.23□□□□□ -0.61
SMIM4-201ENST00000307106 FAM98AQ8NCA5 519 aaKnown RBP11.23□□□□□ -0.61
SMIM4-201ENST00000307106 OR13C4Q8NGS5 318 aa11.23□□□□□ -0.61
SMIM4-201ENST00000307106 LILRB4Q8NHJ6 448 aa11.23□□□□□ -0.61
SMIM4-201ENST00000307106 SLC22A18Q96BI1 424 aa11.23□□□□□ -0.61
SMIM4-201ENST00000307106 SCMH1Q96GD3 660 aa11.23□□□□□ -0.61
SMIM4-201ENST00000307106 ALPK1Q96QP1 1244 aa11.23□□□□□ -0.61
SMIM4-201ENST00000307106 YIPF2Q9BWQ6 316 aa11.23□□□□□ -0.61
SMIM4-201ENST00000307106 SLC24A3Q9HC58 644 aa11.23□□□□□ -0.61
SMIM4-201ENST00000307106 KCNJ16Q9NPI9 418 aa11.23□□□□□ -0.61
SMIM4-201ENST00000307106 ANKRD10Q9NXR5 420 aa11.23□□□□□ -0.61
SMIM4-201ENST00000307106 STOX2Q9P2F5 926 aaPredicted RBP11.23□□□□□ -0.61
SMIM4-201ENST00000307106 TRPC4Q9UBN4 977 aa11.23□□□□□ -0.61
SMIM4-201ENST00000307106 ZC3H7BQ9UGR2 993 aaKnown RBP11.23□□□□□ -0.61
SMIM4-201ENST00000307106 EML6Q6ZMW3 1958 aa11.23□□□□□ -0.61
SMIM4-201ENST00000307106 RASGRF2O14827 1237 aa11.22□□□□□ -0.61
SMIM4-201ENST00000307106 CTSVO60911 334 aa11.22□□□□□ -0.61
SMIM4-201ENST00000307106 S1PR4O95977 384 aa11.22□□□□□ -0.61
SMIM4-201ENST00000307106 AGTP01019 485 aa11.22□□□□□ -0.61
SMIM4-201ENST00000307106 CD46P15529 392 aa11.22□□□□□ -0.61
SMIM4-201ENST00000307106 ZFXP17010 805 aaPredicted RBP11.22□□□□□ -0.61
SMIM4-201ENST00000307106 CD9P21926 228 aa11.22□□□□□ -0.61
SMIM4-201ENST00000307106 DNASE1P24855 282 aa11.22□□□□□ -0.61
SMIM4-201ENST00000307106 ACRV1P26436 265 aa11.22□□□□□ -0.61
SMIM4-201ENST00000307106 CDKN1CP49918 316 aaPredicted RBP11.22□□□□□ -0.61
SMIM4-201ENST00000307106 MEOX1P50221 254 aa11.22□□□□□ -0.61
SMIM4-201ENST00000307106 ST13P50502 369 aaKnown RBP11.22□□□□□ -0.61
SMIM4-201ENST00000307106 DYNLT1P63172 113 aa11.22□□□□□ -0.61
SMIM4-201ENST00000307106 MYL5Q02045 173 aa11.22□□□□□ -0.61
SMIM4-201ENST00000307106 OR1C1Q15619 314 aa11.22□□□□□ -0.61
SMIM4-201ENST00000307106 SF1Q15637 639 aaKnown RBP11.22□□□□□ -0.61
SMIM4-201ENST00000307106 MUM1Q2TAK8 710 aa11.22□□□□□ -0.61
SMIM4-201ENST00000307106 GPR33Q49SQ1 333 aa11.22□□□□□ -0.61
SMIM4-201ENST00000307106 FCRLBQ6BAA4 426 aa11.22□□□□□ -0.61
SMIM4-201ENST00000307106 FRMPD2BQ6IN97 320 aa11.22□□□□□ -0.61
SMIM4-201ENST00000307106 PID1Q7Z2X4 250 aa11.22□□□□□ -0.61
SMIM4-201ENST00000307106 GALNTL5Q7Z4T8 443 aa11.22□□□□□ -0.61
SMIM4-201ENST00000307106 FGD2Q7Z6J4 655 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms