RNA–Protein interactions for RNA: ENST00000304236.2

RAB40A-201, Transcript of RAB40A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40A, Length 1,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40A-201ENST00000304236 PYCR3Q53H96 274 aa13.82□□□□□ -0.2
RAB40A-201ENST00000304236 PLEKHS1Q5SXH7 462 aa13.82□□□□□ -0.2
RAB40A-201ENST00000304236 OTUD3Q5T2D3 398 aaPredicted RBP13.82□□□□□ -0.2
RAB40A-201ENST00000304236 LRIF1Q5T3J3 769 aa13.82□□□□□ -0.2
RAB40A-201ENST00000304236 C22orf39Q6P5X5 142 aa13.82□□□□□ -0.2
RAB40A-201ENST00000304236 SUSD1Q6UWL2 747 aa13.82□□□□□ -0.2
RAB40A-201ENST00000304236 MSANTD1Q6ZTZ1 278 aa13.82□□□□□ -0.2
RAB40A-201ENST00000304236 GAREM2Q75VX8 874 aa13.82□□□□□ -0.2
RAB40A-201ENST00000304236 STK32CQ86UX6 486 aa13.82□□□□□ -0.2
RAB40A-201ENST00000304236 OFCC1Q8IZS5 231 aa13.82□□□□□ -0.2
RAB40A-201ENST00000304236 CLEC4FQ8N1N0 589 aa13.82□□□□□ -0.2
RAB40A-201ENST00000304236 TMEM132CQ8N3T6 1108 aa13.82□□□□□ -0.2
RAB40A-201ENST00000304236 SELENOMQ8WWX9 145 aa13.82□□□□□ -0.2
RAB40A-201ENST00000304236 SLC47A1Q96FL8 570 aa13.82□□□□□ -0.2
RAB40A-201ENST00000304236 CMTM7Q96FZ5 175 aa13.82□□□□□ -0.2
RAB40A-201ENST00000304236 ITCHQ96J02 903 aa13.82□□□□□ -0.2
RAB40A-201ENST00000304236 LMLNQ96KR4 655 aa13.82□□□□□ -0.2
RAB40A-201ENST00000304236 USE1Q9NZ43 259 aa13.82□□□□□ -0.2
RAB40A-201ENST00000304236 SLC25A13Q9UJS0 675 aa13.82□□□□□ -0.2
RAB40A-201ENST00000304236 CLEC4EQ9ULY5 219 aa13.82□□□□□ -0.2
RAB40A-201ENST00000304236 PDE10AQ9Y233 779 aa13.82□□□□□ -0.2
RAB40A-201ENST00000304236 C16orf96A6NNT2 1141 aa13.81□□□□□ -0.2
RAB40A-201ENST00000304236 A8MX80 341 aa13.81□□□□□ -0.2
RAB40A-201ENST00000304236 G3V2T6 193 aa13.81□□□□□ -0.2
RAB40A-201ENST00000304236 CLIC3O95833 236 aa13.81□□□□□ -0.2
RAB40A-201ENST00000304236 LRG1P02750 347 aa13.81□□□□□ -0.2
RAB40A-201ENST00000304236 CDK4P11802 303 aa13.81□□□□□ -0.2
RAB40A-201ENST00000304236 CCR7P32248 378 aa13.81□□□□□ -0.2
RAB40A-201ENST00000304236 S100A3P33764 101 aa13.81□□□□□ -0.2
RAB40A-201ENST00000304236 PTSQ03393 145 aa13.81□□□□□ -0.2
RAB40A-201ENST00000304236 DCTN2Q13561 401 aaKnown RBP13.81□□□□□ -0.2
RAB40A-201ENST00000304236 BOP1Q14137 746 aaKnown RBP13.81□□□□□ -0.2
RAB40A-201ENST00000304236 ATP13A5Q4VNC0 1218 aa13.81□□□□□ -0.2
RAB40A-201ENST00000304236 CARD16Q5EG05 197 aa13.81□□□□□ -0.2
RAB40A-201ENST00000304236 DHRS4L2Q6PKH6 230 aa13.81□□□□□ -0.2
RAB40A-201ENST00000304236 GPR180Q86V85 440 aa13.81□□□□□ -0.2
RAB40A-201ENST00000304236 MSRB3Q8IXL7 192 aa13.81□□□□□ -0.2
RAB40A-201ENST00000304236 L3MBTL4Q8NA19 623 aa13.81□□□□□ -0.2
RAB40A-201ENST00000304236 TTC16Q8NEE8 873 aa13.81□□□□□ -0.2
RAB40A-201ENST00000304236 NUDT8Q8WV74 236 aa13.81□□□□□ -0.2
RAB40A-201ENST00000304236 ISOC1Q96CN7 298 aa13.81□□□□□ -0.2
RAB40A-201ENST00000304236 ACPTQ9BZG2 426 aa13.81□□□□□ -0.2
RAB40A-201ENST00000304236 ELOVL6Q9H5J4 265 aa13.81□□□□□ -0.2
RAB40A-201ENST00000304236 SLC25A37Q9NYZ2 338 aa13.81□□□□□ -0.2
RAB40A-201ENST00000304236 A0A1B0GVG6 124 aa13.8□□□□□ -0.2
RAB40A-201ENST00000304236 RECQL5O94762 991 aaPredicted RBP13.8□□□□□ -0.2
RAB40A-201ENST00000304236 CST1P01037 141 aa13.8□□□□□ -0.2
RAB40A-201ENST00000304236 PDYNP01213 254 aa13.8□□□□□ -0.2
RAB40A-201ENST00000304236 CYP2A7P20853 494 aa13.8□□□□□ -0.2
RAB40A-201ENST00000304236 RPL10P27635 214 aaKnown RBP13.8□□□□□ -0.2
RAB40A-201ENST00000304236 SLC6A12P48065 614 aa13.8□□□□□ -0.2
RAB40A-201ENST00000304236 AP1S2P56377 157 aa13.8□□□□□ -0.2
RAB40A-201ENST00000304236 POLR2LP62875 67 aaKnown RBP13.8□□□□□ -0.2
RAB40A-201ENST00000304236 ZNF33BQ06732 778 aa13.8□□□□□ -0.2
RAB40A-201ENST00000304236 CPSF6Q16630 551 aaKnown RBP eCLIP13.8□□□□□ -0.2
RAB40A-201ENST00000304236 LRRC23Q53EV4 343 aaPredicted RBP13.8□□□□□ -0.2
RAB40A-201ENST00000304236 RBM48Q5RL73 367 aaKnown RBP13.8□□□□□ -0.2
RAB40A-201ENST00000304236 MBOAT1Q6ZNC8 495 aa13.8□□□□□ -0.2
RAB40A-201ENST00000304236 NEK10Q6ZWH5 1172 aa13.8□□□□□ -0.2
RAB40A-201ENST00000304236 CALHM3Q86XJ0 350 aa13.8□□□□□ -0.2
RAB40A-201ENST00000304236 TMC8Q8IU68 726 aa13.8□□□□□ -0.2
RAB40A-201ENST00000304236 PLPP6Q8IY26 295 aa13.8□□□□□ -0.2
RAB40A-201ENST00000304236 KRTCAP2Q8N6L1 136 aa13.8□□□□□ -0.2
RAB40A-201ENST00000304236 FBXO30Q8TB52 745 aa13.8□□□□□ -0.2
RAB40A-201ENST00000304236 ASB11Q8WXH4 323 aa13.8□□□□□ -0.2
RAB40A-201ENST00000304236 TESCQ96BS2 214 aa13.8□□□□□ -0.2
RAB40A-201ENST00000304236 FAM120BQ96EK7 910 aaKnown RBP13.8□□□□□ -0.2
RAB40A-201ENST00000304236 RBM4BQ9BQ04 359 aaKnown RBP13.8□□□□□ -0.2
RAB40A-201ENST00000304236 RBM4Q9BWF3 364 aaKnown RBP13.8□□□□□ -0.2
RAB40A-201ENST00000304236 PAIP1Q9H074 479 aaKnown RBP13.8□□□□□ -0.2
RAB40A-201ENST00000304236 KAT8Q9H7Z6 458 aaKnown RBP13.8□□□□□ -0.2
RAB40A-201ENST00000304236 CXorf21Q9HAI6 301 aa13.8□□□□□ -0.2
RAB40A-201ENST00000304236 DCAF13Q9NV06 445 aaKnown RBP13.8□□□□□ -0.2
RAB40A-201ENST00000304236 IFT80Q9P2H3 777 aaPredicted RBP13.8□□□□□ -0.2
RAB40A-201ENST00000304236 ZNHIT2Q9UHR6 403 aa13.8□□□□□ -0.2
RAB40A-201ENST00000304236 KCNE1BA0A087WTH5 132 aa13.8□□□□□ -0.2
RAB40A-201ENST00000304236 H0Y858 1186 aa13.8□□□□□ -0.2
RAB40A-201ENST00000304236 LEFTY2O00292 366 aa13.8□□□□□ -0.2
RAB40A-201ENST00000304236 GNGT2O14610 69 aa13.8□□□□□ -0.2
RAB40A-201ENST00000304236 EPORP19235 508 aa13.8□□□□□ -0.2
RAB40A-201ENST00000304236 DCKP27707 260 aa13.8□□□□□ -0.2
RAB40A-201ENST00000304236 SPINT3P49223 89 aa13.8□□□□□ -0.2
RAB40A-201ENST00000304236 RPS6KA3P51812 740 aa13.8□□□□□ -0.2
RAB40A-201ENST00000304236 NUBP1P53384 320 aa13.8□□□□□ -0.2
RAB40A-201ENST00000304236 HPCAP84074 193 aa13.8□□□□□ -0.2
RAB40A-201ENST00000304236 B4GALNT1Q00973 533 aa13.8□□□□□ -0.2
RAB40A-201ENST00000304236 ZNF773Q6PK81 442 aa13.8□□□□□ -0.2
RAB40A-201ENST00000304236 KCTD8Q6ZWB6 473 aa13.8□□□□□ -0.2
RAB40A-201ENST00000304236 THAP5Q7Z6K1 395 aa13.8□□□□□ -0.2
RAB40A-201ENST00000304236 ELMOD1Q8N336 334 aa13.8□□□□□ -0.2
RAB40A-201ENST00000304236 BEND7Q8N7W2 519 aaPredicted RBP13.8□□□□□ -0.2
RAB40A-201ENST00000304236 ZNF557Q8N988 423 aaPredicted RBP13.8□□□□□ -0.2
RAB40A-201ENST00000304236 ZNF555Q8NEP9 628 aa13.8□□□□□ -0.2
RAB40A-201ENST00000304236 VOPP1Q96AW1 172 aa13.8□□□□□ -0.2
RAB40A-201ENST00000304236 DOK1Q99704 481 aa13.8□□□□□ -0.2
RAB40A-201ENST00000304236 CPPED1Q9BRF8 314 aaPredicted RBP13.8□□□□□ -0.2
RAB40A-201ENST00000304236 ING2Q9H160 280 aa13.8□□□□□ -0.2
RAB40A-201ENST00000304236 IRF2BPLQ9H1B7 796 aa13.8□□□□□ -0.2
RAB40A-201ENST00000304236 POLR1BQ9H9Y6 1135 aa13.8□□□□□ -0.2
RAB40A-201ENST00000304236 HPS4Q9NQG7 708 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms