RNA–Protein interactions for RNA: ENST00000301717.8

SPSB3-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-201ENST00000301717 LCN10Q6JVE6 187 aa17.52■□□□□ 0.4
SPSB3-201ENST00000301717 INO80CQ6PI98 192 aaPredicted RBP17.52■□□□□ 0.4
SPSB3-201ENST00000301717 FIGLAQ6QHK4 219 aa17.52■□□□□ 0.4
SPSB3-201ENST00000301717 LRRC56Q8IYG6 542 aaPredicted RBP17.52■□□□□ 0.4
SPSB3-201ENST00000301717 SYTL1Q8IYJ3 562 aa17.52■□□□□ 0.4
SPSB3-201ENST00000301717 OR2L3Q8NG85 312 aa17.52■□□□□ 0.4
SPSB3-201ENST00000301717 CDKL2Q92772 493 aa17.52■□□□□ 0.4
SPSB3-201ENST00000301717 SLC22A18Q96BI1 424 aa17.52■□□□□ 0.4
SPSB3-201ENST00000301717 RBBP8Q99708 897 aa17.52■□□□□ 0.4
SPSB3-201ENST00000301717 FANCEQ9HB96 536 aa17.52■□□□□ 0.4
SPSB3-201ENST00000301717 TAC3Q9UHF0 121 aa17.52■□□□□ 0.4
SPSB3-201ENST00000301717 CROTQ9UKG9 612 aa17.52■□□□□ 0.4
SPSB3-201ENST00000301717 ATMQ13315 3056 aa17.51■□□□□ 0.39
SPSB3-201ENST00000301717 NPEPPSL1A6NEC2 478 aa17.51■□□□□ 0.39
SPSB3-201ENST00000301717 E7ENX8 843 aa17.51■□□□□ 0.39
SPSB3-201ENST00000301717 H3BMH7 237 aa17.51■□□□□ 0.39
SPSB3-201ENST00000301717 EIF3FO00303 357 aaPredicted RBP17.51■□□□□ 0.39
SPSB3-201ENST00000301717 CDC7O00311 574 aa17.51■□□□□ 0.39
SPSB3-201ENST00000301717 CTSVO60911 334 aa17.51■□□□□ 0.39
SPSB3-201ENST00000301717 GSTA2P09210 222 aa17.51■□□□□ 0.39
SPSB3-201ENST00000301717 ZNF37AP17032 561 aaPredicted RBP17.51■□□□□ 0.39
SPSB3-201ENST00000301717 DEKP35659 375 aaKnown RBP17.51■□□□□ 0.39
SPSB3-201ENST00000301717 TAP2Q03519 686 aa17.51■□□□□ 0.39
SPSB3-201ENST00000301717 ZXDCQ2QGD7 858 aaPredicted RBP17.51■□□□□ 0.39
SPSB3-201ENST00000301717 ESX1Q8N693 406 aa17.51■□□□□ 0.39
SPSB3-201ENST00000301717 FBXO15Q8NCQ5 510 aaPredicted RBP17.51■□□□□ 0.39
SPSB3-201ENST00000301717 SMPDL3AQ92484 453 aa17.51■□□□□ 0.39
SPSB3-201ENST00000301717 N4BP2L2Q92802 583 aaPredicted RBP17.51■□□□□ 0.39
SPSB3-201ENST00000301717 SLC12A9Q9BXP2 914 aa17.51■□□□□ 0.39
SPSB3-201ENST00000301717 ATG10Q9H0Y0 220 aa17.51■□□□□ 0.39
SPSB3-201ENST00000301717 CDC42EP4Q9H3Q1 356 aaKnown RBP17.51■□□□□ 0.39
SPSB3-201ENST00000301717 SYNPO2LQ9H987 977 aa17.51■□□□□ 0.39
SPSB3-201ENST00000301717 GPN2Q9H9Y4 310 aaPredicted RBP17.51■□□□□ 0.39
SPSB3-201ENST00000301717 STARD5Q9NSY2 213 aa17.51■□□□□ 0.39
SPSB3-201ENST00000301717 NSMCE4AQ9NXX6 385 aa17.51■□□□□ 0.39
SPSB3-201ENST00000301717 UTP6Q9NYH9 597 aaKnown RBP17.51■□□□□ 0.39
SPSB3-201ENST00000301717 STOX2Q9P2F5 926 aaPredicted RBP17.51■□□□□ 0.39
SPSB3-201ENST00000301717 IGKV1-8A0A0C4DH67 115 aa17.5■□□□□ 0.39
SPSB3-201ENST00000301717 MAP3K7O43318 606 aa17.5■□□□□ 0.39
SPSB3-201ENST00000301717 ZNF749O43361 778 aa17.5■□□□□ 0.39
SPSB3-201ENST00000301717 CYP2A7P20853 494 aa17.5■□□□□ 0.39
SPSB3-201ENST00000301717 RPA3P35244 121 aaPredicted RBP17.5■□□□□ 0.39
SPSB3-201ENST00000301717 GP5P40197 560 aa17.5■□□□□ 0.39
SPSB3-201ENST00000301717 UCNP55089 124 aa17.5■□□□□ 0.39
SPSB3-201ENST00000301717 ITGA1P56199 1179 aa17.5■□□□□ 0.39
SPSB3-201ENST00000301717 GLE1Q53GS7 698 aaKnown RBP17.5■□□□□ 0.39
SPSB3-201ENST00000301717 ATP1A1-AS1Q5TC04 95 aa17.5■□□□□ 0.39
SPSB3-201ENST00000301717 GPR155Q7Z3F1 870 aa17.5■□□□□ 0.39
SPSB3-201ENST00000301717 UHMK1Q8TAS1 419 aaKnown RBP17.5■□□□□ 0.39
SPSB3-201ENST00000301717 CT55Q8WUE5 264 aa17.5■□□□□ 0.39
SPSB3-201ENST00000301717 ALKBH8Q96BT7 664 aaKnown RBP17.5■□□□□ 0.39
SPSB3-201ENST00000301717 FMO2Q99518 471 aa17.5■□□□□ 0.39
SPSB3-201ENST00000301717 CPNE1Q99829 537 aa17.5■□□□□ 0.39
SPSB3-201ENST00000301717 PARVBQ9HBI1 364 aa17.5■□□□□ 0.39
SPSB3-201ENST00000301717 CUEDC1Q9NWM3 386 aaPredicted RBP17.5■□□□□ 0.39
SPSB3-201ENST00000301717 IRAK4Q9NWZ3 460 aa17.5■□□□□ 0.39
SPSB3-201ENST00000301717 TXNDC16Q9P2K2 825 aa17.5■□□□□ 0.39
SPSB3-201ENST00000301717 MTRF1LQ9UGC7 380 aaKnown RBP17.5■□□□□ 0.39
SPSB3-201ENST00000301717 NFU1Q9UMS0 254 aa17.5■□□□□ 0.39
SPSB3-201ENST00000301717 SH2B3Q9UQQ2 575 aa17.5■□□□□ 0.39
SPSB3-201ENST00000301717 CACNA1GO43497 2377 aa17.49■□□□□ 0.39
SPSB3-201ENST00000301717 CPNE3O75131 537 aaKnown RBP17.49■□□□□ 0.39
SPSB3-201ENST00000301717 OR2B3O76000 313 aa17.49■□□□□ 0.39
SPSB3-201ENST00000301717 ACSL3O95573 720 aa17.49■□□□□ 0.39
SPSB3-201ENST00000301717 GUCA1CO95843 209 aa17.49■□□□□ 0.39
SPSB3-201ENST00000301717 C8GP07360 202 aa17.49■□□□□ 0.39
SPSB3-201ENST00000301717 STX2P32856 288 aa17.49■□□□□ 0.39
SPSB3-201ENST00000301717 DLSTP36957 453 aa17.49■□□□□ 0.39
SPSB3-201ENST00000301717 TBPL1P62380 186 aa17.49■□□□□ 0.39
SPSB3-201ENST00000301717 ABHD18Q0P651 414 aa17.49■□□□□ 0.39
SPSB3-201ENST00000301717 BMPR2Q13873 1038 aa17.49■□□□□ 0.39
SPSB3-201ENST00000301717 USP10Q14694 798 aaKnown RBP17.49■□□□□ 0.39
SPSB3-201ENST00000301717 ARHGAP19Q14CB8 494 aa17.49■□□□□ 0.39
SPSB3-201ENST00000301717 PTCHD3Q3KNS1 767 aa17.49■□□□□ 0.39
SPSB3-201ENST00000301717 C1orf189Q5VU69 101 aa17.49■□□□□ 0.39
SPSB3-201ENST00000301717 FAM69BQ5VUD6 431 aa17.49■□□□□ 0.39
SPSB3-201ENST00000301717 CYB5D1Q6P9G0 228 aa17.49■□□□□ 0.39
SPSB3-201ENST00000301717 CYS1Q717R9 158 aa17.49■□□□□ 0.39
SPSB3-201ENST00000301717 CMC1Q7Z7K0 106 aa17.49■□□□□ 0.39
SPSB3-201ENST00000301717 MCATQ8IVS2 390 aaKnown RBP17.49■□□□□ 0.39
SPSB3-201ENST00000301717 GSPT2Q8IYD1 628 aaKnown RBP17.49■□□□□ 0.39
SPSB3-201ENST00000301717 ZNF655Q8N720 491 aaPredicted RBP17.49■□□□□ 0.39
SPSB3-201ENST00000301717 OR8K5Q8NH50 307 aa17.49■□□□□ 0.39
SPSB3-201ENST00000301717 MCOLN3Q8TDD5 553 aa17.49■□□□□ 0.39
SPSB3-201ENST00000301717 CLIP3Q96DZ5 547 aa17.49■□□□□ 0.39
SPSB3-201ENST00000301717 GPR22Q99680 433 aa17.49■□□□□ 0.39
SPSB3-201ENST00000301717 DPH7Q9BTV6 452 aa17.49■□□□□ 0.39
SPSB3-201ENST00000301717 ACTR5Q9H9F9 607 aaPredicted RBP17.49■□□□□ 0.39
SPSB3-201ENST00000301717 GPAMQ9HCL2 828 aa17.49■□□□□ 0.39
SPSB3-201ENST00000301717 LHX9Q9NQ69 397 aa17.49■□□□□ 0.39
SPSB3-201ENST00000301717 PCMTD2Q9NV79 361 aa17.49■□□□□ 0.39
SPSB3-201ENST00000301717 EURLQ9NYK6 297 aa17.49■□□□□ 0.39
SPSB3-201ENST00000301717 SERTAD3Q9UJW9 196 aa17.49■□□□□ 0.39
SPSB3-201ENST00000301717 ATRXP46100 2492 aa17.49■□□□□ 0.39
SPSB3-201ENST00000301717 A0A0J9YVX5 310 aa17.48■□□□□ 0.39
SPSB3-201ENST00000301717 E7EQ34 232 aa17.48■□□□□ 0.39
SPSB3-201ENST00000301717 TERTO14746 1132 aaKnown RBP17.48■□□□□ 0.39
SPSB3-201ENST00000301717 NKX2-8O15522 239 aa17.48■□□□□ 0.39
SPSB3-201ENST00000301717 WISP3O95389 354 aaPredicted RBP17.48■□□□□ 0.39
SPSB3-201ENST00000301717 MSL3P1P0C860 447 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms