RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 NIPAL1Q6NVV3 410 aa12.55□□□□□ -0.4
HIF3A-204ENST00000300862 SLC39A11Q8N1S5 342 aa12.55□□□□□ -0.4
HIF3A-204ENST00000300862 TERB1Q8NA31 727 aa12.55□□□□□ -0.4
HIF3A-204ENST00000300862 CHDHQ8NE62 594 aaPredicted RBP12.55□□□□□ -0.4
HIF3A-204ENST00000300862 OR13F1Q8NGS4 319 aa12.55□□□□□ -0.4
HIF3A-204ENST00000300862 ZNF558Q96NG5 402 aa12.55□□□□□ -0.4
HIF3A-204ENST00000300862 SH3GL1Q99961 368 aa12.55□□□□□ -0.4
HIF3A-204ENST00000300862 DGCR6LQ9BY27 220 aa12.55□□□□□ -0.4
HIF3A-204ENST00000300862 YTHDF1Q9BYJ9 559 aaKnown RBP12.55□□□□□ -0.4
HIF3A-204ENST00000300862 SUV39H2Q9H5I1 410 aa12.55□□□□□ -0.4
HIF3A-204ENST00000300862 FBXO10Q9UK96 956 aa12.55□□□□□ -0.4
HIF3A-204ENST00000300862 C5orf42Q9H799 3197 aa12.54□□□□□ -0.4
HIF3A-204ENST00000300862 AGAP14A8MT82 685 aa12.54□□□□□ -0.4
HIF3A-204ENST00000300862 PER2O15055 1255 aa12.54□□□□□ -0.4
HIF3A-204ENST00000300862 MAN1A2O60476 641 aa12.54□□□□□ -0.4
HIF3A-204ENST00000300862 HTR1AP08908 422 aa12.54□□□□□ -0.4
HIF3A-204ENST00000300862 CYP4B1P13584 511 aa12.54□□□□□ -0.4
HIF3A-204ENST00000300862 CDH3P22223 829 aa12.54□□□□□ -0.4
HIF3A-204ENST00000300862 MAP4P27816 1152 aaKnown RBP12.54□□□□□ -0.4
HIF3A-204ENST00000300862 AOAHP28039 575 aa12.54□□□□□ -0.4
HIF3A-204ENST00000300862 PTPN6P29350 595 aa12.54□□□□□ -0.4
HIF3A-204ENST00000300862 GZMMP51124 257 aa12.54□□□□□ -0.4
HIF3A-204ENST00000300862 GRSF1Q12849 480 aaKnown RBP eCLIP12.54□□□□□ -0.4
HIF3A-204ENST00000300862 DDX39BQ13838 428 aaKnown RBP12.54□□□□□ -0.4
HIF3A-204ENST00000300862 CYP2A13Q16696 494 aa12.54□□□□□ -0.4
HIF3A-204ENST00000300862 C6orf141Q5SZD1 244 aa12.54□□□□□ -0.4
HIF3A-204ENST00000300862 ASTLQ6HA08 431 aaPredicted RBP12.54□□□□□ -0.4
HIF3A-204ENST00000300862 LAIR2Q6ISS4 152 aa12.54□□□□□ -0.4
HIF3A-204ENST00000300862 Q6ZVU0 165 aa12.54□□□□□ -0.4
HIF3A-204ENST00000300862 USP45Q70EL2 814 aa12.54□□□□□ -0.4
HIF3A-204ENST00000300862 TCEAL8Q8IYN2 117 aa12.54□□□□□ -0.4
HIF3A-204ENST00000300862 CBARPQ8N350 705 aaPredicted RBP12.54□□□□□ -0.4
HIF3A-204ENST00000300862 ZNF555Q8NEP9 628 aa12.54□□□□□ -0.4
HIF3A-204ENST00000300862 OR7A2PQ8NGA2 310 aa12.54□□□□□ -0.4
HIF3A-204ENST00000300862 FIBINQ8TAL6 211 aa12.54□□□□□ -0.4
HIF3A-204ENST00000300862 PNPT1Q8TCS8 783 aaKnown RBP12.54□□□□□ -0.4
HIF3A-204ENST00000300862 MRPS31Q92665 395 aaKnown RBP12.54□□□□□ -0.4
HIF3A-204ENST00000300862 CAPNS2Q96L46 248 aa12.54□□□□□ -0.4
HIF3A-204ENST00000300862 DEFB118Q96PH6 123 aa12.54□□□□□ -0.4
HIF3A-204ENST00000300862 SLC29A3Q9BZD2 475 aa12.54□□□□□ -0.4
HIF3A-204ENST00000300862 BRD9Q9H8M2 597 aa12.54□□□□□ -0.4
HIF3A-204ENST00000300862 PRM3Q9NNZ6 103 aa12.54□□□□□ -0.4
HIF3A-204ENST00000300862 PALMDQ9NP74 551 aa12.54□□□□□ -0.4
HIF3A-204ENST00000300862 TMEM9Q9P0T7 183 aa12.54□□□□□ -0.4
HIF3A-204ENST00000300862 B4GALT6Q9UBX8 382 aa12.54□□□□□ -0.4
HIF3A-204ENST00000300862 CCL26Q9Y258 94 aa12.54□□□□□ -0.4
HIF3A-204ENST00000300862 KCNE1BA0A087WTH5 132 aa12.54□□□□□ -0.4
HIF3A-204ENST00000300862 RFXANKO14593 260 aa12.54□□□□□ -0.4
HIF3A-204ENST00000300862 C1SP09871 688 aa12.54□□□□□ -0.4
HIF3A-204ENST00000300862 HIST1H2AGP0C0S8 130 aaPredicted RBP12.54□□□□□ -0.4
HIF3A-204ENST00000300862 HIST1H2ADP20671 130 aa12.54□□□□□ -0.4
HIF3A-204ENST00000300862 MAPK8P45983 427 aa12.54□□□□□ -0.4
HIF3A-204ENST00000300862 SNRPD1P62314 119 aaKnown RBP12.54□□□□□ -0.4
HIF3A-204ENST00000300862 MPPE1Q53F39 396 aa12.54□□□□□ -0.4
HIF3A-204ENST00000300862 TTC23Q5W5X9 447 aa12.54□□□□□ -0.4
HIF3A-204ENST00000300862 C22orf39Q6P5X5 142 aa12.54□□□□□ -0.4
HIF3A-204ENST00000300862 GALNT18Q6P9A2 607 aa12.54□□□□□ -0.4
HIF3A-204ENST00000300862 FAM217AQ8IXS0 508 aa12.54□□□□□ -0.4
HIF3A-204ENST00000300862 SPARTQ8N0X7 666 aa12.54□□□□□ -0.4
HIF3A-204ENST00000300862 CNIH3Q8TBE1 160 aa12.54□□□□□ -0.4
HIF3A-204ENST00000300862 ASB11Q8WXH4 323 aa12.54□□□□□ -0.4
HIF3A-204ENST00000300862 HIST1H2AHQ96KK5 128 aa12.54□□□□□ -0.4
HIF3A-204ENST00000300862 CSF3RQ99062 836 aa12.54□□□□□ -0.4
HIF3A-204ENST00000300862 HIST1H2AJQ99878 128 aa12.54□□□□□ -0.4
HIF3A-204ENST00000300862 H2AFJQ9BTM1 129 aa12.54□□□□□ -0.4
HIF3A-204ENST00000300862 YIPF2Q9BWQ6 316 aa12.54□□□□□ -0.4
HIF3A-204ENST00000300862 KCNH6Q9H252 994 aa12.54□□□□□ -0.4
HIF3A-204ENST00000300862 ERVK-11Q9UQG0 969 aa12.54□□□□□ -0.4
HIF3A-204ENST00000300862 ERGIC3Q9Y282 383 aa12.54□□□□□ -0.4
HIF3A-204ENST00000300862 ERN1O75460 977 aaKnown RBP12.53□□□□□ -0.4
HIF3A-204ENST00000300862 CXCL10P02778 98 aa12.53□□□□□ -0.4
HIF3A-204ENST00000300862 CCNA2P20248 432 aa12.53□□□□□ -0.4
HIF3A-204ENST00000300862 NRIP1P48552 1158 aa12.53□□□□□ -0.4
HIF3A-204ENST00000300862 DEFB103AP81534 67 aa12.53□□□□□ -0.4
HIF3A-204ENST00000300862 GTF2H3Q13889 308 aa12.53□□□□□ -0.4
HIF3A-204ENST00000300862 POM121L1PQ3SYA9 428 aa12.53□□□□□ -0.4
HIF3A-204ENST00000300862 MFSD4BQ5TF39 518 aa12.53□□□□□ -0.4
HIF3A-204ENST00000300862 EGFLAMQ63HQ2 1017 aa12.53□□□□□ -0.4
HIF3A-204ENST00000300862 ATG9BQ674R7 924 aa12.53□□□□□ -0.4
HIF3A-204ENST00000300862 CALHM3Q86XJ0 350 aa12.53□□□□□ -0.4
HIF3A-204ENST00000300862 TMEM25Q86YD3 366 aa12.53□□□□□ -0.4
HIF3A-204ENST00000300862 ADHFE1Q8IWW8 467 aa12.53□□□□□ -0.4
HIF3A-204ENST00000300862 PLPP6Q8IY26 295 aa12.53□□□□□ -0.4
HIF3A-204ENST00000300862 EID3Q8N140 333 aa12.53□□□□□ -0.4
HIF3A-204ENST00000300862 TMEM132CQ8N3T6 1108 aa12.53□□□□□ -0.4
HIF3A-204ENST00000300862 TRUB1Q8WWH5 349 aaKnown RBP12.53□□□□□ -0.4
HIF3A-204ENST00000300862 MTERF1Q99551 399 aaKnown RBP12.53□□□□□ -0.4
HIF3A-204ENST00000300862 MYOCQ99972 504 aa12.53□□□□□ -0.4
HIF3A-204ENST00000300862 RBM4BQ9BQ04 359 aaKnown RBP12.53□□□□□ -0.4
HIF3A-204ENST00000300862 DPH2Q9BQC3 489 aaPredicted RBP12.53□□□□□ -0.4
HIF3A-204ENST00000300862 RBM4Q9BWF3 364 aaKnown RBP12.53□□□□□ -0.4
HIF3A-204ENST00000300862 SLC12A9Q9BXP2 914 aa12.53□□□□□ -0.4
HIF3A-204ENST00000300862 CCDC90BQ9GZT6 254 aa12.53□□□□□ -0.4
HIF3A-204ENST00000300862 WARS2Q9UGM6 360 aaKnown RBP12.53□□□□□ -0.4
HIF3A-204ENST00000300862 VPS4AQ9UN37 437 aa12.53□□□□□ -0.4
HIF3A-204ENST00000300862 SNX6Q9UNH7 406 aa12.53□□□□□ -0.4
HIF3A-204ENST00000300862 ABCG2Q9UNQ0 655 aa12.53□□□□□ -0.4
HIF3A-204ENST00000300862 A0A096LPI6 279 aa12.53□□□□□ -0.4
HIF3A-204ENST00000300862 LOC100130705A0A1B0GUX0 176 aa12.53□□□□□ -0.4
HIF3A-204ENST00000300862 TMEM202A6NGA9 273 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms