RNA–Protein interactions for RNA: ENST00000299596.8

TMEM41B-201, Transcript of transmembrane protein 41B, humanhuman

TSL 1 (best)

Gene TMEM41B, Length 1,443 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM41B-201ENST00000299596 VPS4AQ9UN37 437 aa13.3□□□□□ -0.28
TMEM41B-201ENST00000299596 RUVBL2Q9Y230 463 aaKnown RBP13.3□□□□□ -0.28
TMEM41B-201ENST00000299596 CTAGE9A4FU28 777 aa13.3□□□□□ -0.28
TMEM41B-201ENST00000299596 FITM1A5D6W6 292 aa13.3□□□□□ -0.28
TMEM41B-201ENST00000299596 CLEC18AA5D8T8 446 aa13.3□□□□□ -0.28
TMEM41B-201ENST00000299596 PGRMC1O00264 195 aaKnown RBP13.3□□□□□ -0.28
TMEM41B-201ENST00000299596 CTSVO60911 334 aa13.3□□□□□ -0.28
TMEM41B-201ENST00000299596 CNOT3O75175 753 aaKnown RBP13.3□□□□□ -0.28
TMEM41B-201ENST00000299596 SORBS2O94875 1100 aaKnown RBP13.3□□□□□ -0.28
TMEM41B-201ENST00000299596 ALPPP05187 535 aa13.3□□□□□ -0.28
TMEM41B-201ENST00000299596 UMODP07911 640 aa13.3□□□□□ -0.28
TMEM41B-201ENST00000299596 VARSP26640 1264 aaKnown RBP13.3□□□□□ -0.28
TMEM41B-201ENST00000299596 HSD17B2P37059 387 aa13.3□□□□□ -0.28
TMEM41B-201ENST00000299596 ARHGAP19Q14CB8 494 aa13.3□□□□□ -0.28
TMEM41B-201ENST00000299596 KLHL38Q2WGJ6 581 aa13.3□□□□□ -0.28
TMEM41B-201ENST00000299596 TTLL9Q3SXZ7 439 aa13.3□□□□□ -0.28
TMEM41B-201ENST00000299596 VWA5B1Q5TIE3 1220 aa13.3□□□□□ -0.28
TMEM41B-201ENST00000299596 JMJD6Q6NYC1 403 aaPredicted RBP13.3□□□□□ -0.28
TMEM41B-201ENST00000299596 CLEC18BQ6UXF7 455 aa13.3□□□□□ -0.28
TMEM41B-201ENST00000299596 NEK10Q6ZWH5 1172 aa13.3□□□□□ -0.28
TMEM41B-201ENST00000299596 LMNTD2Q8IXW0 634 aa13.3□□□□□ -0.28
TMEM41B-201ENST00000299596 GALNT16Q8N428 558 aa13.3□□□□□ -0.28
TMEM41B-201ENST00000299596 CLEC18CQ8NCF0 446 aa13.3□□□□□ -0.28
TMEM41B-201ENST00000299596 GALNT11Q8NCW6 608 aa13.3□□□□□ -0.28
TMEM41B-201ENST00000299596 ZNF669Q96BR6 464 aaPredicted RBP13.3□□□□□ -0.28
TMEM41B-201ENST00000299596 FAM136AQ96C01 138 aa13.3□□□□□ -0.28
TMEM41B-201ENST00000299596 SERPINB12Q96P63 405 aa13.3□□□□□ -0.28
TMEM41B-201ENST00000299596 SLC26A1Q9H2B4 701 aa13.3□□□□□ -0.28
TMEM41B-201ENST00000299596 CCDC68Q9H2F9 335 aa13.3□□□□□ -0.28
TMEM41B-201ENST00000299596 SLAMF7Q9NQ25 335 aa13.3□□□□□ -0.28
TMEM41B-201ENST00000299596 FAM114A2Q9NRY5 505 aa13.3□□□□□ -0.28
TMEM41B-201ENST00000299596 KLHL42Q9P2K6 505 aa13.3□□□□□ -0.28
TMEM41B-201ENST00000299596 NEU2Q9Y3R4 380 aa13.3□□□□□ -0.28
TMEM41B-201ENST00000299596 FAM169AQ9Y6X4 670 aa13.3□□□□□ -0.28
TMEM41B-201ENST00000299596 NBASA2RRP1 2371 aa13.29□□□□□ -0.28
TMEM41B-201ENST00000299596 A0A1W2PPV9 198 aa13.29□□□□□ -0.28
TMEM41B-201ENST00000299596 ZNF839A8K0R7 811 aa13.29□□□□□ -0.28
TMEM41B-201ENST00000299596 PSIP1O75475 530 aaKnown RBP13.29□□□□□ -0.28
TMEM41B-201ENST00000299596 USP1O94782 785 aa13.29□□□□□ -0.28
TMEM41B-201ENST00000299596 IPO13O94829 963 aaKnown RBP13.29□□□□□ -0.28
TMEM41B-201ENST00000299596 CATP04040 527 aaKnown RBP13.29□□□□□ -0.28
TMEM41B-201ENST00000299596 ERGP11308 486 aa13.29□□□□□ -0.28
TMEM41B-201ENST00000299596 MMP11P24347 488 aa13.29□□□□□ -0.28
TMEM41B-201ENST00000299596 MCM3P25205 808 aa13.29□□□□□ -0.28
TMEM41B-201ENST00000299596 PSMB5P28074 263 aa13.29□□□□□ -0.28
TMEM41B-201ENST00000299596 CMPK1P30085 196 aa13.29□□□□□ -0.28
TMEM41B-201ENST00000299596 CLCN7P51798 805 aa13.29□□□□□ -0.28
TMEM41B-201ENST00000299596 SOX8P57073 446 aa13.29□□□□□ -0.28
TMEM41B-201ENST00000299596 VSX2P58304 361 aaPredicted RBP13.29□□□□□ -0.28
TMEM41B-201ENST00000299596 MYBPC3Q14896 1274 aa13.29□□□□□ -0.28
TMEM41B-201ENST00000299596 ACSBG2Q5FVE4 666 aa13.29□□□□□ -0.28
TMEM41B-201ENST00000299596 WASHC2DQ5SRD0 308 aa13.29□□□□□ -0.28
TMEM41B-201ENST00000299596 ZNF470Q6ECI4 717 aa13.29□□□□□ -0.28
TMEM41B-201ENST00000299596 PPP1R32Q7Z5V6 425 aa13.29□□□□□ -0.28
TMEM41B-201ENST00000299596 FAM26EQ8N5C1 309 aa13.29□□□□□ -0.28
TMEM41B-201ENST00000299596 CALML6Q8TD86 181 aa13.29□□□□□ -0.28
TMEM41B-201ENST00000299596 ACTRT1Q8TDG2 376 aa13.29□□□□□ -0.28
TMEM41B-201ENST00000299596 GRK7Q8WTQ7 553 aa13.29□□□□□ -0.28
TMEM41B-201ENST00000299596 SMPDL3AQ92484 453 aa13.29□□□□□ -0.28
TMEM41B-201ENST00000299596 PNPLA2Q96AD5 504 aa13.29□□□□□ -0.28
TMEM41B-201ENST00000299596 ATP13A2Q9NQ11 1180 aa13.29□□□□□ -0.28
TMEM41B-201ENST00000299596 GALPQ9UBC7 116 aa13.29□□□□□ -0.28
TMEM41B-201ENST00000299596 TSR3Q9UJK0 312 aaKnown RBP13.29□□□□□ -0.28
TMEM41B-201ENST00000299596 NXT1Q9UKK6 140 aaKnown RBP13.29□□□□□ -0.28
TMEM41B-201ENST00000299596 MAP4K5Q9Y4K4 846 aa13.29□□□□□ -0.28
TMEM41B-201ENST00000299596 GOLGA6L10A0A0M3HER8 536 aa13.28□□□□□ -0.28
TMEM41B-201ENST00000299596 ZCWPW2A0A1B0GU75 182 aa13.28□□□□□ -0.28
TMEM41B-201ENST00000299596 HYKKA2RU49 373 aa13.28□□□□□ -0.28
TMEM41B-201ENST00000299596 KRT87PA6NCN2 255 aa13.28□□□□□ -0.28
TMEM41B-201ENST00000299596 ARHGEF33A8MVX0 844 aa13.28□□□□□ -0.28
TMEM41B-201ENST00000299596 GOLGA8MH3BSY2 632 aa13.28□□□□□ -0.28
TMEM41B-201ENST00000299596 AGPSO00116 658 aa13.28□□□□□ -0.28
TMEM41B-201ENST00000299596 MYO1CO00159 1063 aa13.28□□□□□ -0.28
TMEM41B-201ENST00000299596 PHF2O75151 1096 aa13.28□□□□□ -0.28
TMEM41B-201ENST00000299596 ITGAXP20702 1163 aa13.28□□□□□ -0.28
TMEM41B-201ENST00000299596 RPA3P35244 121 aaPredicted RBP13.28□□□□□ -0.28
TMEM41B-201ENST00000299596 MAGEA3P43357 314 aa13.28□□□□□ -0.28
TMEM41B-201ENST00000299596 FNTAP49354 379 aa13.28□□□□□ -0.28
TMEM41B-201ENST00000299596 RAPSNQ13702 412 aa13.28□□□□□ -0.28
TMEM41B-201ENST00000299596 FASTKQ14296 549 aaKnown RBP13.28□□□□□ -0.28
TMEM41B-201ENST00000299596 INPP5JQ15735 1006 aaPredicted RBP13.28□□□□□ -0.28
TMEM41B-201ENST00000299596 NKG7Q16617 165 aa13.28□□□□□ -0.28
TMEM41B-201ENST00000299596 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.28□□□□□ -0.28
TMEM41B-201ENST00000299596 FRMPD2BQ6IN97 320 aa13.28□□□□□ -0.28
TMEM41B-201ENST00000299596 RNF44Q7L0R7 432 aa13.28□□□□□ -0.28
TMEM41B-201ENST00000299596 REXO1L1PQ8IX06 675 aa13.28□□□□□ -0.28
TMEM41B-201ENST00000299596 RBMXL3Q8N7X1 1067 aaKnown RBP13.28□□□□□ -0.28
TMEM41B-201ENST00000299596 NAT8LQ8N9F0 302 aa13.28□□□□□ -0.28
TMEM41B-201ENST00000299596 TM9SF4Q92544 642 aa13.28□□□□□ -0.28
TMEM41B-201ENST00000299596 KCNJ9Q92806 393 aa13.28□□□□□ -0.28
TMEM41B-201ENST00000299596 VPS50Q96JG6 964 aa13.28□□□□□ -0.28
TMEM41B-201ENST00000299596 TRIM56Q9BRZ2 755 aaKnown RBP13.28□□□□□ -0.28
TMEM41B-201ENST00000299596 DPH7Q9BTV6 452 aa13.28□□□□□ -0.28
TMEM41B-201ENST00000299596 MFRPQ9BY79 579 aa13.28□□□□□ -0.28
TMEM41B-201ENST00000299596 UTP6Q9NYH9 597 aaKnown RBP13.28□□□□□ -0.28
TMEM41B-201ENST00000299596 ANKMY1Q9P2S6 941 aa13.28□□□□□ -0.28
TMEM41B-201ENST00000299596 ZC3H7BQ9UGR2 993 aaKnown RBP13.28□□□□□ -0.28
TMEM41B-201ENST00000299596 MAD1L1Q9Y6D9 718 aa13.28□□□□□ -0.28
TMEM41B-201ENST00000299596 COMMD10Q9Y6G5 202 aa13.28□□□□□ -0.28
TMEM41B-201ENST00000299596 MED13Q9UHV7 2174 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms