RNA–Protein interactions for RNA: ENST00000299130.7

BCCIP-202, Transcript of BRCA2 and CDKN1A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene BCCIP, Length 2,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCCIP-202ENST00000299130 RAB2BQ8WUD1 216 aa13.24□□□□□ -0.29
BCCIP-202ENST00000299130 MYLIPQ8WY64 445 aa13.24□□□□□ -0.29
BCCIP-202ENST00000299130 SCRN2Q96FV2 425 aa13.24□□□□□ -0.29
BCCIP-202ENST00000299130 REXO5Q96IC2 774 aaKnown RBP13.24□□□□□ -0.29
BCCIP-202ENST00000299130 CCDC138Q96M89 665 aa13.24□□□□□ -0.29
BCCIP-202ENST00000299130 RHNO1Q9BSD3 238 aa13.24□□□□□ -0.29
BCCIP-202ENST00000299130 BBS2Q9BXC9 721 aa13.24□□□□□ -0.29
BCCIP-202ENST00000299130 CCDC90BQ9GZT6 254 aa13.24□□□□□ -0.29
BCCIP-202ENST00000299130 THG1LQ9NWX6 298 aaKnown RBP13.24□□□□□ -0.29
BCCIP-202ENST00000299130 C3orf18Q9UK00 162 aa13.24□□□□□ -0.29
BCCIP-202ENST00000299130 NUP214P35658 2090 aaPredicted RBP13.24□□□□□ -0.29
BCCIP-202ENST00000299130 hCG_2039718K7EN88 272 aa13.24□□□□□ -0.29
BCCIP-202ENST00000299130 RFXANKO14593 260 aa13.24□□□□□ -0.29
BCCIP-202ENST00000299130 WNT9AO14904 365 aa13.24□□□□□ -0.29
BCCIP-202ENST00000299130 YY2O15391 372 aa13.24□□□□□ -0.29
BCCIP-202ENST00000299130 ALDH1A1P00352 501 aa13.24□□□□□ -0.29
BCCIP-202ENST00000299130 HNRNPCP07910 306 aaKnown RBP eCLIP13.24□□□□□ -0.29
BCCIP-202ENST00000299130 C1SP09871 688 aa13.24□□□□□ -0.29
BCCIP-202ENST00000299130 CBSLP0DN79 551 aa13.24□□□□□ -0.29
BCCIP-202ENST00000299130 FMO3P31513 532 aa13.24□□□□□ -0.29
BCCIP-202ENST00000299130 CBSP35520 551 aa13.24□□□□□ -0.29
BCCIP-202ENST00000299130 SLC6A12P48065 614 aa13.24□□□□□ -0.29
BCCIP-202ENST00000299130 DAPP51397 102 aa13.24□□□□□ -0.29
BCCIP-202ENST00000299130 GABARAPL2P60520 117 aa13.24□□□□□ -0.29
BCCIP-202ENST00000299130 IL5RAQ01344 420 aa13.24□□□□□ -0.29
BCCIP-202ENST00000299130 IL1RL1Q01638 556 aa13.24□□□□□ -0.29
BCCIP-202ENST00000299130 EPS8Q12929 822 aa13.24□□□□□ -0.29
BCCIP-202ENST00000299130 GTF2H3Q13889 308 aa13.24□□□□□ -0.29
BCCIP-202ENST00000299130 METTL2BQ6P1Q9 378 aaKnown RBP13.24□□□□□ -0.29
BCCIP-202ENST00000299130 TPRG1Q6ZUI0 275 aa13.24□□□□□ -0.29
BCCIP-202ENST00000299130 VTCN1Q7Z7D3 282 aa13.24□□□□□ -0.29
BCCIP-202ENST00000299130 ZNF554Q86TJ5 538 aa13.24□□□□□ -0.29
BCCIP-202ENST00000299130 ASB11Q8WXH4 323 aa13.24□□□□□ -0.29
BCCIP-202ENST00000299130 NRBF2Q96F24 287 aa13.24□□□□□ -0.29
BCCIP-202ENST00000299130 LYSMD1Q96S90 227 aa13.24□□□□□ -0.29
BCCIP-202ENST00000299130 DPH2Q9BQC3 489 aaPredicted RBP13.24□□□□□ -0.29
BCCIP-202ENST00000299130 SLC12A9Q9BXP2 914 aa13.24□□□□□ -0.29
BCCIP-202ENST00000299130 HMX1Q9NP08 348 aaPredicted RBP13.24□□□□□ -0.29
BCCIP-202ENST00000299130 ERVK-18Q9QC07 812 aa13.24□□□□□ -0.29
BCCIP-202ENST00000299130 BAG5Q9UL15 447 aa13.24□□□□□ -0.29
BCCIP-202ENST00000299130 VPS4AQ9UN37 437 aa13.24□□□□□ -0.29
BCCIP-202ENST00000299130 SNX6Q9UNH7 406 aa13.24□□□□□ -0.29
BCCIP-202ENST00000299130 A0A1W2PQ67 120 aa13.23□□□□□ -0.29
BCCIP-202ENST00000299130 BCKDKO14874 412 aa13.23□□□□□ -0.29
BCCIP-202ENST00000299130 SLC16A6O15403 523 aa13.23□□□□□ -0.29
BCCIP-202ENST00000299130 PRPS2P11908 318 aa13.23□□□□□ -0.29
BCCIP-202ENST00000299130 CD22P20273 847 aa13.23□□□□□ -0.29
BCCIP-202ENST00000299130 EPHA2P29317 976 aa13.23□□□□□ -0.29
BCCIP-202ENST00000299130 PPP3CCP48454 512 aa13.23□□□□□ -0.29
BCCIP-202ENST00000299130 CLK3P49761 638 aaKnown RBP13.23□□□□□ -0.29
BCCIP-202ENST00000299130 EPHB3P54753 998 aa13.23□□□□□ -0.29
BCCIP-202ENST00000299130 ABHD18Q0P651 414 aa13.23□□□□□ -0.29
BCCIP-202ENST00000299130 ZNF648Q5T619 568 aaPredicted RBP13.23□□□□□ -0.29
BCCIP-202ENST00000299130 ZCCHC8Q6NZY4 707 aaKnown RBP13.23□□□□□ -0.29
BCCIP-202ENST00000299130 CRTC3Q6UUV7 619 aa13.23□□□□□ -0.29
BCCIP-202ENST00000299130 LRRC70Q7Z2Q7 622 aa13.23□□□□□ -0.29
BCCIP-202ENST00000299130 CMTM8Q8IZV2 173 aa13.23□□□□□ -0.29
BCCIP-202ENST00000299130 TESCQ96BS2 214 aa13.23□□□□□ -0.29
BCCIP-202ENST00000299130 CMTM7Q96FZ5 175 aa13.23□□□□□ -0.29
BCCIP-202ENST00000299130 HHIPQ96QV1 700 aa13.23□□□□□ -0.29
BCCIP-202ENST00000299130 NODALQ96S42 347 aa13.23□□□□□ -0.29
BCCIP-202ENST00000299130 RMND5AQ9H871 391 aa13.23□□□□□ -0.29
BCCIP-202ENST00000299130 FAM8A1Q9UBU6 413 aa13.23□□□□□ -0.29
BCCIP-202ENST00000299130 COL4A6Q14031 1691 aa13.23□□□□□ -0.29
BCCIP-202ENST00000299130 BOLA2-SMG1P6H3BVE0 249 aa13.23□□□□□ -0.29
BCCIP-202ENST00000299130 CLPXO76031 633 aa13.23□□□□□ -0.29
BCCIP-202ENST00000299130 RECQL5O94762 991 aaPredicted RBP13.23□□□□□ -0.29
BCCIP-202ENST00000299130 PARNO95453 639 aaKnown RBP13.23□□□□□ -0.29
BCCIP-202ENST00000299130 CKMP06732 381 aa13.23□□□□□ -0.29
BCCIP-202ENST00000299130 GABRR2P28476 465 aa13.23□□□□□ -0.29
BCCIP-202ENST00000299130 CD6P30203 668 aa13.23□□□□□ -0.29
BCCIP-202ENST00000299130 HALP42357 657 aa13.23□□□□□ -0.29
BCCIP-202ENST00000299130 MAGEA2P43356 314 aa13.23□□□□□ -0.29
BCCIP-202ENST00000299130 MAP2K4P45985 399 aa13.23□□□□□ -0.29
BCCIP-202ENST00000299130 WNT3P56703 355 aa13.23□□□□□ -0.29
BCCIP-202ENST00000299130 EMX1Q04741 257 aaPredicted RBP13.23□□□□□ -0.29
BCCIP-202ENST00000299130 RAB33AQ14088 237 aa13.23□□□□□ -0.29
BCCIP-202ENST00000299130 GBX1Q14549 363 aa13.23□□□□□ -0.29
BCCIP-202ENST00000299130 NOXRED1Q6NXP6 359 aa13.23□□□□□ -0.29
BCCIP-202ENST00000299130 C16orf87Q6PH81 154 aa13.23□□□□□ -0.29
BCCIP-202ENST00000299130 SHQ1Q6PI26 577 aaKnown RBP13.23□□□□□ -0.29
BCCIP-202ENST00000299130 CYP2U1Q7Z449 544 aa13.23□□□□□ -0.29
BCCIP-202ENST00000299130 BTLAQ7Z6A9 289 aa13.23□□□□□ -0.29
BCCIP-202ENST00000299130 CLECL1Q8IZS7 167 aa13.23□□□□□ -0.29
BCCIP-202ENST00000299130 PARP8Q8N3A8 854 aa13.23□□□□□ -0.29
BCCIP-202ENST00000299130 L3MBTL4Q8NA19 623 aa13.23□□□□□ -0.29
BCCIP-202ENST00000299130 FBLIM1Q8WUP2 373 aa13.23□□□□□ -0.29
BCCIP-202ENST00000299130 FAR1Q8WVX9 515 aa13.23□□□□□ -0.29
BCCIP-202ENST00000299130 FOXJ1Q92949 421 aa13.23□□□□□ -0.29
BCCIP-202ENST00000299130 ECHDC3Q96DC8 303 aa13.23□□□□□ -0.29
BCCIP-202ENST00000299130 REXO4Q9GZR2 422 aaKnown RBP13.23□□□□□ -0.29
BCCIP-202ENST00000299130 RAD21L1Q9H4I0 556 aa13.23□□□□□ -0.29
BCCIP-202ENST00000299130 RIBC2Q9H4K1 309 aa13.23□□□□□ -0.29
BCCIP-202ENST00000299130 SUV39H2Q9H5I1 410 aa13.23□□□□□ -0.29
BCCIP-202ENST00000299130 ZDHHC6Q9H6R6 413 aa13.23□□□□□ -0.29
BCCIP-202ENST00000299130 AASDHPPTQ9NRN7 309 aa13.23□□□□□ -0.29
BCCIP-202ENST00000299130 KIAA1522Q9P206 1035 aaPredicted RBP13.23□□□□□ -0.29
BCCIP-202ENST00000299130 NAALAD2Q9Y3Q0 740 aa13.23□□□□□ -0.29
BCCIP-202ENST00000299130 IGLV3-16A0A075B6K0 115 aa13.22□□□□□ -0.29
BCCIP-202ENST00000299130 MYO1GB0I1T2 1018 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms