RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 TRIM13O60858 407 aa14.65□□□□□ -0.06
CCDC140-201ENST00000295226 WDR47O94967 919 aa14.65□□□□□ -0.06
CCDC140-201ENST00000295226 LDOC1O95751 146 aaPredicted RBP14.65□□□□□ -0.06
CCDC140-201ENST00000295226 CHRM5P08912 532 aaPredicted RBP14.65□□□□□ -0.06
CCDC140-201ENST00000295226 ERGP11308 486 aa14.65□□□□□ -0.06
CCDC140-201ENST00000295226 FGF3P11487 239 aaPredicted RBP14.65□□□□□ -0.06
CCDC140-201ENST00000295226 NEFHP12036 1026 aa14.65□□□□□ -0.06
CCDC140-201ENST00000295226 SHMT2P34897 504 aa14.65□□□□□ -0.06
CCDC140-201ENST00000295226 SLC6A12P48065 614 aa14.65□□□□□ -0.06
CCDC140-201ENST00000295226 HNMTP50135 292 aa14.65□□□□□ -0.06
CCDC140-201ENST00000295226 TBPL1P62380 186 aa14.65□□□□□ -0.06
CCDC140-201ENST00000295226 DAB2P98082 770 aa14.65□□□□□ -0.06
CCDC140-201ENST00000295226 CHI3L2Q15782 390 aa14.65□□□□□ -0.06
CCDC140-201ENST00000295226 AMZ1Q400G9 498 aa14.65□□□□□ -0.06
CCDC140-201ENST00000295226 ZNF678Q5SXM1 525 aa14.65□□□□□ -0.06
CCDC140-201ENST00000295226 LIPMQ5VYY2 423 aa14.65□□□□□ -0.06
CCDC140-201ENST00000295226 EFL1Q7Z2Z2 1120 aaKnown RBP14.65□□□□□ -0.06
CCDC140-201ENST00000295226 NAXDQ8IW45 347 aa14.65□□□□□ -0.06
CCDC140-201ENST00000295226 OR2L8Q8NGY9 312 aa14.65□□□□□ -0.06
CCDC140-201ENST00000295226 OR56A3Q8NH54 315 aa14.65□□□□□ -0.06
CCDC140-201ENST00000295226 ZFPM2Q8WW38 1151 aa14.65□□□□□ -0.06
CCDC140-201ENST00000295226 ATL1Q8WXF7 558 aa14.65□□□□□ -0.06
CCDC140-201ENST00000295226 SH3KBP1Q96B97 665 aa14.65□□□□□ -0.06
CCDC140-201ENST00000295226 PPM1MQ96MI6 270 aa14.65□□□□□ -0.06
CCDC140-201ENST00000295226 OR4K3Q96R72 315 aa14.65□□□□□ -0.06
CCDC140-201ENST00000295226 GATA5Q9BWX5 397 aaPredicted RBP14.65□□□□□ -0.06
CCDC140-201ENST00000295226 KCNK4Q9NYG8 393 aa14.65□□□□□ -0.06
CCDC140-201ENST00000295226 SPATA7Q9P0W8 599 aa14.65□□□□□ -0.06
CCDC140-201ENST00000295226 MID2Q9UJV3 735 aa14.65□□□□□ -0.06
CCDC140-201ENST00000295226 SH2B3Q9UQQ2 575 aa14.65□□□□□ -0.06
CCDC140-201ENST00000295226 CAPN7Q9Y6W3 813 aa14.65□□□□□ -0.06
CCDC140-201ENST00000295226 SNRNP200O75643 2136 aaKnown RBP14.64□□□□□ -0.07
CCDC140-201ENST00000295226 STK16O75716 305 aa14.64□□□□□ -0.07
CCDC140-201ENST00000295226 DNAJC8O75937 253 aaPredicted RBP14.64□□□□□ -0.07
CCDC140-201ENST00000295226 SUPT7LO94864 414 aa14.64□□□□□ -0.07
CCDC140-201ENST00000295226 UBXN7O94888 489 aa14.64□□□□□ -0.07
CCDC140-201ENST00000295226 AMD1P17707 334 aa14.64□□□□□ -0.07
CCDC140-201ENST00000295226 IMPDH1P20839 514 aa14.64□□□□□ -0.07
CCDC140-201ENST00000295226 GGT5P36269 586 aa14.64□□□□□ -0.07
CCDC140-201ENST00000295226 HERVK_113P63132 956 aa14.64□□□□□ -0.07
CCDC140-201ENST00000295226 NFKB2Q00653 900 aa14.64□□□□□ -0.07
CCDC140-201ENST00000295226 SLC14A1Q13336 389 aa14.64□□□□□ -0.07
CCDC140-201ENST00000295226 ARHGAP19Q14CB8 494 aa14.64□□□□□ -0.07
CCDC140-201ENST00000295226 CDKL4Q5MAI5 379 aa14.64□□□□□ -0.07
CCDC140-201ENST00000295226 THEMIS2Q5TEJ8 643 aa14.64□□□□□ -0.07
CCDC140-201ENST00000295226 ATG14Q6ZNE5 492 aa14.64□□□□□ -0.07
CCDC140-201ENST00000295226 USP53Q70EK8 1073 aa14.64□□□□□ -0.07
CCDC140-201ENST00000295226 RAB44Q7Z6P3 723 aaPredicted RBP14.64□□□□□ -0.07
CCDC140-201ENST00000295226 THOC6Q86W42 341 aaKnown RBP14.64□□□□□ -0.07
CCDC140-201ENST00000295226 SLC22A9Q8IVM8 553 aa14.64□□□□□ -0.07
CCDC140-201ENST00000295226 RBM12BQ8IXT5 1001 aaKnown RBP14.64□□□□□ -0.07
CCDC140-201ENST00000295226 KIAA2013Q8IYS2 634 aa14.64□□□□□ -0.07
CCDC140-201ENST00000295226 TEX9Q8N6V9 391 aa14.64□□□□□ -0.07
CCDC140-201ENST00000295226 ERVK-6Q9BXR3 956 aa14.64□□□□□ -0.07
CCDC140-201ENST00000295226 SHCBP1LQ9BZQ2 653 aa14.64□□□□□ -0.07
CCDC140-201ENST00000295226 HRASLS2Q9NWW9 162 aa14.64□□□□□ -0.07
CCDC140-201ENST00000295226 DMXL1Q9Y485 3027 aa14.63□□□□□ -0.07
CCDC140-201ENST00000295226 GSAPA4D1B5 854 aa14.63□□□□□ -0.07
CCDC140-201ENST00000295226 EME2A4GXA9 379 aaPredicted RBP14.63□□□□□ -0.07
CCDC140-201ENST00000295226 ISM1B1AKI9 464 aa14.63□□□□□ -0.07
CCDC140-201ENST00000295226 STX16-NPEPL1H3BU86 382 aa14.63□□□□□ -0.07
CCDC140-201ENST00000295226 E2F3O00716 465 aa14.63□□□□□ -0.07
CCDC140-201ENST00000295226 STX16O14662 325 aa14.63□□□□□ -0.07
CCDC140-201ENST00000295226 BIRC5O15392 142 aa14.63□□□□□ -0.07
CCDC140-201ENST00000295226 EDF1O60869 148 aaKnown RBP14.63□□□□□ -0.07
CCDC140-201ENST00000295226 PROS1P07225 676 aa14.63□□□□□ -0.07
CCDC140-201ENST00000295226 CKMT1AP12532 417 aa14.63□□□□□ -0.07
CCDC140-201ENST00000295226 SCTRP47872 440 aa14.63□□□□□ -0.07
CCDC140-201ENST00000295226 DNAJB13P59910 316 aa14.63□□□□□ -0.07
CCDC140-201ENST00000295226 PCBP2Q15366 365 aaKnown RBP eCLIP14.63□□□□□ -0.07
CCDC140-201ENST00000295226 TRIM73Q86UV7 250 aa14.63□□□□□ -0.07
CCDC140-201ENST00000295226 TCAIMQ8N3R3 496 aa14.63□□□□□ -0.07
CCDC140-201ENST00000295226 RAB42Q8N4Z0 105 aa14.63□□□□□ -0.07
CCDC140-201ENST00000295226 DCBLD1Q8N8Z6 715 aa14.63□□□□□ -0.07
CCDC140-201ENST00000295226 SNX31Q8N9S9 440 aa14.63□□□□□ -0.07
CCDC140-201ENST00000295226 AVL9Q8NBF6 648 aa14.63□□□□□ -0.07
CCDC140-201ENST00000295226 PPP1R14CQ8TAE6 165 aa14.63□□□□□ -0.07
CCDC140-201ENST00000295226 IFI44Q8TCB0 444 aa14.63□□□□□ -0.07
CCDC140-201ENST00000295226 SMPDL3AQ92484 453 aa14.63□□□□□ -0.07
CCDC140-201ENST00000295226 ZNF75CPQ92670 426 aaPredicted RBP14.63□□□□□ -0.07
CCDC140-201ENST00000295226 MIPEPQ99797 713 aa14.63□□□□□ -0.07
CCDC140-201ENST00000295226 SGPP1Q9BX95 441 aa14.63□□□□□ -0.07
CCDC140-201ENST00000295226 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.63□□□□□ -0.07
CCDC140-201ENST00000295226 UCK1Q9HA47 277 aa14.63□□□□□ -0.07
CCDC140-201ENST00000295226 SEMA4BQ9NPR2 832 aaPredicted RBP14.63□□□□□ -0.07
CCDC140-201ENST00000295226 CCDC177Q9NQR7 707 aaPredicted RBP14.63□□□□□ -0.07
CCDC140-201ENST00000295226 OR6C2Q9NZP2 312 aa14.63□□□□□ -0.07
CCDC140-201ENST00000295226 OPTCQ9UBM4 332 aa14.63□□□□□ -0.07
CCDC140-201ENST00000295226 TAC3Q9UHF0 121 aa14.63□□□□□ -0.07
CCDC140-201ENST00000295226 PCTPQ9UKL6 214 aa14.63□□□□□ -0.07
CCDC140-201ENST00000295226 TMCO1Q9UM00 188 aa14.63□□□□□ -0.07
CCDC140-201ENST00000295226 SLC12A4Q9UP95 1085 aa14.63□□□□□ -0.07
CCDC140-201ENST00000295226 KLHL20Q9Y2M5 609 aa14.63□□□□□ -0.07
CCDC140-201ENST00000295226 GVINP1Q7Z2Y8 2422 aa14.63□□□□□ -0.07
CCDC140-201ENST00000295226 IGHV1OR21-1A0A087WYE8 117 aa14.62□□□□□ -0.07
CCDC140-201ENST00000295226 A0A1B0GTL3 188 aa14.62□□□□□ -0.07
CCDC140-201ENST00000295226 PIPSLA2A3N6 862 aa14.62□□□□□ -0.07
CCDC140-201ENST00000295226 CFAP73A6NFT4 308 aa14.62□□□□□ -0.07
CCDC140-201ENST00000295226 LILRA5A6NI73 299 aa14.62□□□□□ -0.07
CCDC140-201ENST00000295226 ITM2AO43736 263 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms