RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 GRHL1Q9NZI5 618 aa16.9■□□□□ 0.3
SHANK1-201ENST00000293441 B4GALT2O60909 372 aa16.89■□□□□ 0.29
SHANK1-201ENST00000293441 TYRP1P17643 537 aa16.89■□□□□ 0.29
SHANK1-201ENST00000293441 ENPP2Q13822 863 aa16.89■□□□□ 0.29
SHANK1-201ENST00000293441 CAND1Q86VP6 1230 aaKnown RBP16.89■□□□□ 0.29
SHANK1-201ENST00000293441 PLA2G15Q8NCC3 412 aa16.89■□□□□ 0.29
SHANK1-201ENST00000293441 SLC35F5Q8WV83 523 aa16.89■□□□□ 0.29
SHANK1-201ENST00000293441 CENPNQ96H22 339 aaPredicted RBP16.89■□□□□ 0.29
SHANK1-201ENST00000293441 SHOX2O60902 331 aaPredicted RBP16.89■□□□□ 0.29
SHANK1-201ENST00000293441 CYP11A1P05108 521 aa16.89■□□□□ 0.29
SHANK1-201ENST00000293441 GKP32189 559 aa16.89■□□□□ 0.29
SHANK1-201ENST00000293441 COQ8BQ96D53 544 aa16.89■□□□□ 0.29
SHANK1-201ENST00000293441 ZNF347Q96SE7 839 aa16.89■□□□□ 0.29
SHANK1-201ENST00000293441 RNF186Q9NXI6 227 aa16.89■□□□□ 0.29
SHANK1-201ENST00000293441 UTS2RQ9UKP6 389 aa16.89■□□□□ 0.29
SHANK1-201ENST00000293441 MTRF1O75570 445 aaKnown RBP16.89■□□□□ 0.29
SHANK1-201ENST00000293441 GPR17Q13304 367 aa16.89■□□□□ 0.29
SHANK1-201ENST00000293441 CRELD1Q96HD1 420 aa16.89■□□□□ 0.29
SHANK1-201ENST00000293441 DUXAA6NLW8 204 aa16.89■□□□□ 0.29
SHANK1-201ENST00000293441 AHCYL1O43865 530 aa16.89■□□□□ 0.29
SHANK1-201ENST00000293441 TRAPPC6AO75865 159 aa16.89■□□□□ 0.29
SHANK1-201ENST00000293441 ERVK-8P63133 956 aa16.89■□□□□ 0.29
SHANK1-201ENST00000293441 DLG1Q12959 904 aa16.89■□□□□ 0.29
SHANK1-201ENST00000293441 OLIG2Q13516 323 aa16.89■□□□□ 0.29
SHANK1-201ENST00000293441 NPY5RQ15761 445 aa16.89■□□□□ 0.29
SHANK1-201ENST00000293441 TMEM214Q6NUQ4 689 aaKnown RBP16.89■□□□□ 0.29
SHANK1-201ENST00000293441 SLC9B2Q86UD5 537 aa16.89■□□□□ 0.29
SHANK1-201ENST00000293441 SLC30A8Q8IWU4 369 aa16.89■□□□□ 0.29
SHANK1-201ENST00000293441 FITM2Q8N6M3 262 aa16.89■□□□□ 0.29
SHANK1-201ENST00000293441 ZNF461Q8TAF7 563 aa16.89■□□□□ 0.29
SHANK1-201ENST00000293441 ZNF296Q8WUU4 475 aaPredicted RBP16.89■□□□□ 0.29
SHANK1-201ENST00000293441 CHCHD6Q9BRQ6 235 aa16.89■□□□□ 0.29
SHANK1-201ENST00000293441 KLK3P07288 261 aaPredicted RBP16.89■□□□□ 0.29
SHANK1-201ENST00000293441 SLC39A4Q6P5W5 647 aa16.89■□□□□ 0.29
SHANK1-201ENST00000293441 OXR1Q8N573 874 aa16.89■□□□□ 0.29
SHANK1-201ENST00000293441 DIRAS2Q96HU8 199 aa16.89■□□□□ 0.29
SHANK1-201ENST00000293441 SMOQ99835 787 aa16.89■□□□□ 0.29
SHANK1-201ENST00000293441 USP29Q9HBJ7 922 aa16.89■□□□□ 0.29
SHANK1-201ENST00000293441 KMOO15229 486 aa16.88■□□□□ 0.29
SHANK1-201ENST00000293441 CPNE3O75131 537 aaKnown RBP16.88■□□□□ 0.29
SHANK1-201ENST00000293441 ZNF30P17039 623 aa16.88■□□□□ 0.29
SHANK1-201ENST00000293441 SCNN1AP37088 669 aa16.88■□□□□ 0.29
SHANK1-201ENST00000293441 USP30Q70CQ3 517 aa16.88■□□□□ 0.29
SHANK1-201ENST00000293441 LRRC70Q7Z2Q7 622 aa16.88■□□□□ 0.29
SHANK1-201ENST00000293441 LDAHQ9H6V9 325 aa16.88■□□□□ 0.29
SHANK1-201ENST00000293441 GPN1Q9HCN4 374 aaPredicted RBP16.88■□□□□ 0.29
SHANK1-201ENST00000293441 KLRF1Q9NZS2 232 aa16.88■□□□□ 0.29
SHANK1-201ENST00000293441 P2RX2Q9UBL9 471 aa16.88■□□□□ 0.29
SHANK1-201ENST00000293441 DNAJB4Q9UDY4 337 aa16.88■□□□□ 0.29
SHANK1-201ENST00000293441 WBP11Q9Y2W2 641 aaKnown RBP16.88■□□□□ 0.29
SHANK1-201ENST00000293441 SCDO00767 359 aa16.88■□□□□ 0.29
SHANK1-201ENST00000293441 HCAR3P49019 387 aa16.88■□□□□ 0.29
SHANK1-201ENST00000293441 SPIN4Q56A73 249 aa16.88■□□□□ 0.29
SHANK1-201ENST00000293441 OLFML1Q6UWY5 402 aa16.88■□□□□ 0.29
SHANK1-201ENST00000293441 C1orf52Q8N6N3 182 aaKnown RBP16.88■□□□□ 0.29
SHANK1-201ENST00000293441 TFGQ92734 400 aaPredicted RBP16.88■□□□□ 0.29
SHANK1-201ENST00000293441 EFCAB11Q9BUY7 163 aa16.88■□□□□ 0.29
SHANK1-201ENST00000293441 MBD2Q9UBB5 411 aa16.88■□□□□ 0.29
SHANK1-201ENST00000293441 ANXA2P2A6NMY6 339 aa16.88■□□□□ 0.29
SHANK1-201ENST00000293441 ADH1BP00325 375 aa16.88■□□□□ 0.29
SHANK1-201ENST00000293441 ANXA2P07355 339 aaKnown RBP16.88■□□□□ 0.29
SHANK1-201ENST00000293441 PIM1P11309 404 aaPredicted RBP16.88■□□□□ 0.29
SHANK1-201ENST00000293441 NR4A1P22736 598 aa16.88■□□□□ 0.29
SHANK1-201ENST00000293441 KCNJ5P48544 419 aa16.88■□□□□ 0.29
SHANK1-201ENST00000293441 RPS6KA3P51812 740 aa16.88■□□□□ 0.29
SHANK1-201ENST00000293441 CBX3Q13185 183 aa16.88■□□□□ 0.29
SHANK1-201ENST00000293441 TPRG1Q6ZUI0 275 aa16.88■□□□□ 0.29
SHANK1-201ENST00000293441 LAPTM4BQ86VI4 370 aa16.88■□□□□ 0.29
SHANK1-201ENST00000293441 FARSBQ9NSD9 589 aaKnown RBP16.88■□□□□ 0.29
SHANK1-201ENST00000293441 FZD4Q9ULV1 537 aa16.88■□□□□ 0.29
SHANK1-201ENST00000293441 UNCXA6NJT0 531 aa16.88■□□□□ 0.29
SHANK1-201ENST00000293441 TRIM3O75382 744 aaPredicted RBP16.88■□□□□ 0.29
SHANK1-201ENST00000293441 CHRM5P08912 532 aaPredicted RBP16.88■□□□□ 0.29
SHANK1-201ENST00000293441 TMEM156Q8N614 296 aa16.88■□□□□ 0.29
SHANK1-201ENST00000293441 WDR12Q9GZL7 423 aaKnown RBP16.88■□□□□ 0.29
SHANK1-201ENST00000293441 SPATA7Q9P0W8 599 aa16.88■□□□□ 0.29
SHANK1-201ENST00000293441 WRBO00258 174 aa16.88■□□□□ 0.29
SHANK1-201ENST00000293441 PEX12O00623 359 aa16.88■□□□□ 0.29
SHANK1-201ENST00000293441 CDKN1CP49918 316 aaPredicted RBP16.88■□□□□ 0.29
SHANK1-201ENST00000293441 DSTNP60981 165 aa16.88■□□□□ 0.29
SHANK1-201ENST00000293441 PGBD2Q6P3X8 592 aa16.88■□□□□ 0.29
SHANK1-201ENST00000293441 COL21A1Q96P44 957 aa16.88■□□□□ 0.29
SHANK1-201ENST00000293441 RAB26Q9ULW5 256 aa16.88■□□□□ 0.29
SHANK1-201ENST00000293441 KLF8O95600 359 aaPredicted RBP16.87■□□□□ 0.29
SHANK1-201ENST00000293441 CBSLP0DN79 551 aa16.87■□□□□ 0.29
SHANK1-201ENST00000293441 PRPS1L1P21108 318 aa16.87■□□□□ 0.29
SHANK1-201ENST00000293441 CBSP35520 551 aa16.87■□□□□ 0.29
SHANK1-201ENST00000293441 TRPV5Q9NQA5 729 aa16.87■□□□□ 0.29
SHANK1-201ENST00000293441 ING3Q9NXR8 418 aa16.87■□□□□ 0.29
SHANK1-201ENST00000293441 DUOX1Q9NRD9 1551 aa16.87■□□□□ 0.29
SHANK1-201ENST00000293441 JUNP05412 331 aaKnown RBP16.87■□□□□ 0.29
SHANK1-201ENST00000293441 CYP1B1Q16678 543 aa16.87■□□□□ 0.29
SHANK1-201ENST00000293441 CLEC12AQ5QGZ9 265 aa16.87■□□□□ 0.29
SHANK1-201ENST00000293441 CMASQ8NFW8 434 aaPredicted RBP16.87■□□□□ 0.29
SHANK1-201ENST00000293441 ENGP17813 658 aa16.87■□□□□ 0.29
SHANK1-201ENST00000293441 PTX3P26022 381 aaPredicted RBP16.87■□□□□ 0.29
SHANK1-201ENST00000293441 PRRT3Q5FWE3 981 aa16.87■□□□□ 0.29
SHANK1-201ENST00000293441 CCDC54Q8NEL0 328 aa16.87■□□□□ 0.29
SHANK1-201ENST00000293441 TMEM209Q96SK2 561 aa16.87■□□□□ 0.29
SHANK1-201ENST00000293441 MAN2B2Q9Y2E5 1009 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms