RNA–Protein interactions for RNA: ENST00000286398.11

SMC2-201, Transcript of structural maintenance of chromosomes 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC2, Length 5,992 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-201ENST00000286398 CTBP2P56545 445 aa8.9□□□□□ -0.99
SMC2-201ENST00000286398 FXYD6P3P58550 94 aa8.9□□□□□ -0.99
SMC2-201ENST00000286398 CAPSQ13938 189 aa8.9□□□□□ -0.99
SMC2-201ENST00000286398 TMEM236Q5W0B7 351 aa8.9□□□□□ -0.99
SMC2-201ENST00000286398 DPY19L3Q6ZPD9 716 aa8.9□□□□□ -0.99
SMC2-201ENST00000286398 XYLT1Q86Y38 959 aa8.9□□□□□ -0.99
SMC2-201ENST00000286398 ESX1Q8N693 406 aa8.9□□□□□ -0.99
SMC2-201ENST00000286398 ARRDC4Q8NCT1 418 aa8.9□□□□□ -0.99
SMC2-201ENST00000286398 HIST1H2AAQ96QV6 131 aa8.9□□□□□ -0.99
SMC2-201ENST00000286398 C1orf21Q9H246 121 aa8.9□□□□□ -0.99
SMC2-201ENST00000286398 RPF2Q9H7B2 306 aaKnown RBP8.9□□□□□ -0.99
SMC2-201ENST00000286398 USP29Q9HBJ7 922 aa8.9□□□□□ -0.99
SMC2-201ENST00000286398 SCP2D1Q9UJQ7 156 aa8.9□□□□□ -0.99
SMC2-201ENST00000286398 RAI2Q9Y5P3 530 aa8.9□□□□□ -0.99
SMC2-201ENST00000286398 NEO1Q92859 1461 aa8.89□□□□□ -0.99
SMC2-201ENST00000286398 TRAV19A0A0A6YYK7 116 aa8.89□□□□□ -0.99
SMC2-201ENST00000286398 OR6C6A6NF89 314 aa8.89□□□□□ -0.99
SMC2-201ENST00000286398 RASGRP1O95267 797 aa8.89□□□□□ -0.99
SMC2-201ENST00000286398 CLIC3O95833 236 aa8.89□□□□□ -0.99
SMC2-201ENST00000286398 VEGFAP15692 232 aaPredicted RBP8.89□□□□□ -0.99
SMC2-201ENST00000286398 ZNF20P17024 532 aa8.89□□□□□ -0.99
SMC2-201ENST00000286398 AOC1P19801 751 aa8.89□□□□□ -0.99
SMC2-201ENST00000286398 PNLIPRP1P54315 467 aa8.89□□□□□ -0.99
SMC2-201ENST00000286398 CTC1Q2NKJ3 1217 aa8.89□□□□□ -0.99
SMC2-201ENST00000286398 XKR4Q5GH76 650 aa8.89□□□□□ -0.99
SMC2-201ENST00000286398 TSTD2Q5T7W7 516 aa8.89□□□□□ -0.99
SMC2-201ENST00000286398 ZDHHC24Q6UX98 284 aa8.89□□□□□ -0.99
SMC2-201ENST00000286398 SLC51AQ86UW1 340 aa8.89□□□□□ -0.99
SMC2-201ENST00000286398 ACBD4Q8NC06 268 aa8.89□□□□□ -0.99
SMC2-201ENST00000286398 CERKQ8TCT0 537 aa8.89□□□□□ -0.99
SMC2-201ENST00000286398 OR2S2Q9NQN1 319 aa8.89□□□□□ -0.99
SMC2-201ENST00000286398 MRPL17Q9NRX2 175 aaKnown RBP8.89□□□□□ -0.99
SMC2-201ENST00000286398 CLIC1O00299 241 aa8.89□□□□□ -0.99
SMC2-201ENST00000286398 HTRA2O43464 458 aaPredicted RBP8.89□□□□□ -0.99
SMC2-201ENST00000286398 CD48P09326 243 aa8.89□□□□□ -0.99
SMC2-201ENST00000286398 GNAZP19086 355 aa8.89□□□□□ -0.99
SMC2-201ENST00000286398 FPR1P21462 350 aa8.89□□□□□ -0.99
SMC2-201ENST00000286398 MECP2P51608 486 aaKnown RBP8.89□□□□□ -0.99
SMC2-201ENST00000286398 CRISP3P54108 245 aa8.89□□□□□ -0.99
SMC2-201ENST00000286398 LAPTM5Q13571 262 aa8.89□□□□□ -0.99
SMC2-201ENST00000286398 SCARB2Q14108 478 aa8.89□□□□□ -0.99
SMC2-201ENST00000286398 MAD2L1BPQ15013 274 aaPredicted RBP8.89□□□□□ -0.99
SMC2-201ENST00000286398 SDHAF4Q5VUM1 108 aa8.89□□□□□ -0.99
SMC2-201ENST00000286398 MON1BQ7L1V2 547 aa8.89□□□□□ -0.99
SMC2-201ENST00000286398 MON1AQ86VX9 555 aa8.89□□□□□ -0.99
SMC2-201ENST00000286398 LRRC52Q8N7C0 313 aa8.89□□□□□ -0.99
SMC2-201ENST00000286398 GALNT11Q8NCW6 608 aa8.89□□□□□ -0.99
SMC2-201ENST00000286398 JPH3Q8WXH2 748 aaPredicted RBP8.89□□□□□ -0.99
SMC2-201ENST00000286398 DDX1Q92499 740 aaKnown RBP8.89□□□□□ -0.99
SMC2-201ENST00000286398 TMEM209Q96SK2 561 aa8.89□□□□□ -0.99
SMC2-201ENST00000286398 MYOCQ99972 504 aa8.89□□□□□ -0.99
SMC2-201ENST00000286398 NDC1Q9BTX1 674 aa8.89□□□□□ -0.99
SMC2-201ENST00000286398 TMEM185BQ9H7F4 350 aa8.89□□□□□ -0.99
SMC2-201ENST00000286398 ZNF358Q9NW07 568 aa8.89□□□□□ -0.99
SMC2-201ENST00000286398 KCNN3Q9UGI6 736 aa8.89□□□□□ -0.99
SMC2-201ENST00000286398 MBD5Q9P267 1494 aa8.89□□□□□ -0.99
SMC2-201ENST00000286398 USP31Q70CQ4 1352 aa8.89□□□□□ -0.99
SMC2-201ENST00000286398 RENP00797 406 aa8.89□□□□□ -0.99
SMC2-201ENST00000286398 SPAM1P38567 509 aa8.89□□□□□ -0.99
SMC2-201ENST00000286398 PIK3CBP42338 1070 aa8.89□□□□□ -0.99
SMC2-201ENST00000286398 DSC2Q02487 901 aa8.89□□□□□ -0.99
SMC2-201ENST00000286398 NFE2L1Q14494 772 aa8.89□□□□□ -0.99
SMC2-201ENST00000286398 SEC23BQ15437 767 aa8.89□□□□□ -0.99
SMC2-201ENST00000286398 CFAP52Q8N1V2 620 aa8.89□□□□□ -0.99
SMC2-201ENST00000286398 JAGN1Q8N5M9 183 aa8.89□□□□□ -0.99
SMC2-201ENST00000286398 PNLDC1Q8NA58 520 aaKnown RBP8.89□□□□□ -0.99
SMC2-201ENST00000286398 NCSTNQ92542 709 aa8.89□□□□□ -0.99
SMC2-201ENST00000286398 ITPKCQ96DU7 683 aa8.89□□□□□ -0.99
SMC2-201ENST00000286398 ZBED6CLQ96FA7 236 aaPredicted RBP8.89□□□□□ -0.99
SMC2-201ENST00000286398 S100A16Q96FQ6 103 aaKnown RBP8.89□□□□□ -0.99
SMC2-201ENST00000286398 ASPNQ9BXN1 380 aa8.89□□□□□ -0.99
SMC2-201ENST00000286398 TP63Q9H3D4 680 aaPredicted RBP8.89□□□□□ -0.99
SMC2-201ENST00000286398 E2F3O00716 465 aa8.89□□□□□ -0.99
SMC2-201ENST00000286398 PABPC4LP0CB38 370 aaKnown RBP8.89□□□□□ -0.99
SMC2-201ENST00000286398 RAB3BP20337 219 aa8.89□□□□□ -0.99
SMC2-201ENST00000286398 SMSP52788 366 aa8.89□□□□□ -0.99
SMC2-201ENST00000286398 HNRNPA0Q13151 305 aaKnown RBP8.89□□□□□ -0.99
SMC2-201ENST00000286398 IKBKEQ14164 716 aa8.89□□□□□ -0.99
SMC2-201ENST00000286398 ZNF674Q2M3X9 581 aa8.89□□□□□ -0.99
SMC2-201ENST00000286398 LCLAT1Q6UWP7 414 aa8.89□□□□□ -0.99
SMC2-201ENST00000286398 PTF1AQ7RTS3 328 aa8.89□□□□□ -0.99
SMC2-201ENST00000286398 SLC22A15Q8IZD6 547 aa8.89□□□□□ -0.99
SMC2-201ENST00000286398 AURKBQ96GD4 344 aaPredicted RBP8.89□□□□□ -0.99
SMC2-201ENST00000286398 TM9SF2Q99805 663 aa8.89□□□□□ -0.99
SMC2-201ENST00000286398 MAPKAP1Q9BPZ7 522 aa8.89□□□□□ -0.99
SMC2-201ENST00000286398 HTATIP2Q9BUP3 242 aa8.89□□□□□ -0.99
SMC2-201ENST00000286398 SLC25A51Q9H1U9 297 aa8.89□□□□□ -0.99
SMC2-201ENST00000286398 FAM83DQ9H4H8 585 aa8.89□□□□□ -0.99
SMC2-201ENST00000286398 TPT1P8Q9HAU6 139 aa8.89□□□□□ -0.99
SMC2-201ENST00000286398 NEUROD4Q9HD90 331 aa8.89□□□□□ -0.99
SMC2-201ENST00000286398 TMEM45AQ9NWC5 275 aa8.89□□□□□ -0.99
SMC2-201ENST00000286398 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.89□□□□□ -0.99
SMC2-201ENST00000286398 AGAP5A6NIR3 686 aa8.89□□□□□ -0.99
SMC2-201ENST00000286398 LRRN3E7EW58 273 aa8.89□□□□□ -0.99
SMC2-201ENST00000286398 TLX3O43711 291 aaPredicted RBP8.89□□□□□ -0.99
SMC2-201ENST00000286398 BCAS2O75934 225 aaPredicted RBP8.89□□□□□ -0.99
SMC2-201ENST00000286398 OPN1SWP03999 348 aa8.89□□□□□ -0.99
SMC2-201ENST00000286398 LGALS2P05162 132 aa8.89□□□□□ -0.99
SMC2-201ENST00000286398 GSTM3P21266 225 aa8.89□□□□□ -0.99
SMC2-201ENST00000286398 AVPR1BP47901 424 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms