RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 FBXO43Q4G163 708 aa16.1■□□□□ 0.17
SH3RF1-201ENST00000284637 VARS2Q5ST30 1063 aaKnown RBP16.1■□□□□ 0.17
SH3RF1-201ENST00000284637 PPP2R2DQ66LE6 453 aa16.1■□□□□ 0.17
SH3RF1-201ENST00000284637 OR4F3Q6IEY1 312 aa16.1■□□□□ 0.17
SH3RF1-201ENST00000284637 SCML4Q8N228 414 aa16.1■□□□□ 0.17
SH3RF1-201ENST00000284637 SLC15A4Q8N697 577 aa16.1■□□□□ 0.17
SH3RF1-201ENST00000284637 C9orf43Q8TAL5 461 aaPredicted RBP16.1■□□□□ 0.17
SH3RF1-201ENST00000284637 RNF31Q96EP0 1072 aa16.1■□□□□ 0.17
SH3RF1-201ENST00000284637 SLC30A2Q9BRI3 323 aa16.1■□□□□ 0.17
SH3RF1-201ENST00000284637 CDADC1Q9BWV3 514 aa16.1■□□□□ 0.17
SH3RF1-201ENST00000284637 ELAC1Q9H777 363 aaKnown RBP16.1■□□□□ 0.17
SH3RF1-201ENST00000284637 POLE4Q9NR33 117 aa16.1■□□□□ 0.17
SH3RF1-201ENST00000284637 ZDHHC7Q9NXF8 308 aa16.1■□□□□ 0.17
SH3RF1-201ENST00000284637 CNOT11Q9UKZ1 510 aaKnown RBP16.1■□□□□ 0.17
SH3RF1-201ENST00000284637 CDC14AQ9UNH5 594 aa16.1■□□□□ 0.17
SH3RF1-201ENST00000284637 ZNF701M0R085 212 aaPredicted RBP16.1■□□□□ 0.17
SH3RF1-201ENST00000284637 ENGP17813 658 aa16.1■□□□□ 0.17
SH3RF1-201ENST00000284637 CD72P21854 359 aa16.1■□□□□ 0.17
SH3RF1-201ENST00000284637 WASP42768 502 aa16.1■□□□□ 0.17
SH3RF1-201ENST00000284637 CLCN4P51793 760 aa16.1■□□□□ 0.17
SH3RF1-201ENST00000284637 RPS24P62847 133 aaKnown RBP16.1■□□□□ 0.17
SH3RF1-201ENST00000284637 OR2T5Q6IEZ7 315 aa16.1■□□□□ 0.17
SH3RF1-201ENST00000284637 ASB18Q6ZVZ8 466 aa16.1■□□□□ 0.17
SH3RF1-201ENST00000284637 CHST9Q7L1S5 443 aa16.1■□□□□ 0.17
SH3RF1-201ENST00000284637 GHDCQ8N2G8 530 aa16.1■□□□□ 0.17
SH3RF1-201ENST00000284637 OR2T29Q8NH02 315 aa16.1■□□□□ 0.17
SH3RF1-201ENST00000284637 MSANTD3Q96H12 275 aa16.1■□□□□ 0.17
SH3RF1-201ENST00000284637 MED11Q9P086 117 aa16.1■□□□□ 0.17
SH3RF1-201ENST00000284637 SMPD1P17405 629 aa16.09■□□□□ 0.17
SH3RF1-201ENST00000284637 SWI5Q1ZZU3 235 aa16.09■□□□□ 0.17
SH3RF1-201ENST00000284637 DPY19L1Q2PZI1 675 aa16.09■□□□□ 0.17
SH3RF1-201ENST00000284637 TIGD5Q53EQ6 642 aa16.09■□□□□ 0.17
SH3RF1-201ENST00000284637 BORAQ6PGQ7 559 aa16.09■□□□□ 0.17
SH3RF1-201ENST00000284637 PLD6Q8N2A8 252 aaKnown RBP16.09■□□□□ 0.17
SH3RF1-201ENST00000284637 DPF3Q92784 378 aa16.09■□□□□ 0.17
SH3RF1-201ENST00000284637 ARMC5Q96C12 935 aa16.09■□□□□ 0.17
SH3RF1-201ENST00000284637 GPER1Q99527 375 aa16.09■□□□□ 0.17
SH3RF1-201ENST00000284637 DNTTP04053 509 aa16.09■□□□□ 0.17
SH3RF1-201ENST00000284637 MMAAQ8IVH4 418 aaKnown RBP16.09■□□□□ 0.17
SH3RF1-201ENST00000284637 ARL14EPQ8N8R7 260 aaPredicted RBP16.09■□□□□ 0.17
SH3RF1-201ENST00000284637 DENND1AQ8TEH3 1009 aa16.09■□□□□ 0.17
SH3RF1-201ENST00000284637 ING5Q8WYH8 240 aa16.09■□□□□ 0.17
SH3RF1-201ENST00000284637 GRIP1Q9Y3R0 1128 aa16.09■□□□□ 0.17
SH3RF1-201ENST00000284637 T-ENOLP0DO92 83 aa16.09■□□□□ 0.17
SH3RF1-201ENST00000284637 TFPIP10646 304 aa16.09■□□□□ 0.17
SH3RF1-201ENST00000284637 RPL17P18621 184 aaKnown RBP16.09■□□□□ 0.17
SH3RF1-201ENST00000284637 AP3S2P59780 193 aa16.09■□□□□ 0.17
SH3RF1-201ENST00000284637 ZNF155Q12901 538 aaPredicted RBP16.09■□□□□ 0.17
SH3RF1-201ENST00000284637 SCARB2Q14108 478 aa16.09■□□□□ 0.17
SH3RF1-201ENST00000284637 LAPTM4AQ15012 233 aa16.09■□□□□ 0.17
SH3RF1-201ENST00000284637 SIRPB2Q5JXA9 342 aa16.09■□□□□ 0.17
SH3RF1-201ENST00000284637 SLC30A6Q6NXT4 461 aa16.09■□□□□ 0.17
SH3RF1-201ENST00000284637 UGT2A3Q6UWM9 527 aa16.09■□□□□ 0.17
SH3RF1-201ENST00000284637 ZNF431Q8TF32 576 aaPredicted RBP16.09■□□□□ 0.17
SH3RF1-201ENST00000284637 KCNA7Q96RP8 456 aa16.09■□□□□ 0.17
SH3RF1-201ENST00000284637 PHPT1Q9NRX4 125 aaPredicted RBP16.09■□□□□ 0.17
SH3RF1-201ENST00000284637 A0A0X1KG70 313 aa16.09■□□□□ 0.17
SH3RF1-201ENST00000284637 KRBA1A5PL33 1030 aa16.09■□□□□ 0.17
SH3RF1-201ENST00000284637 XKRYO14609 159 aa16.09■□□□□ 0.17
SH3RF1-201ENST00000284637 PCDH7O60245 1069 aa16.09■□□□□ 0.17
SH3RF1-201ENST00000284637 CCNDBP1O95273 360 aa16.09■□□□□ 0.17
SH3RF1-201ENST00000284637 SLC2A2P11168 524 aaPredicted RBP16.09■□□□□ 0.17
SH3RF1-201ENST00000284637 PRKACAP17612 351 aa16.09■□□□□ 0.17
SH3RF1-201ENST00000284637 MATN1P21941 496 aa16.09■□□□□ 0.17
SH3RF1-201ENST00000284637 TCEA1P23193 301 aaKnown RBP16.09■□□□□ 0.17
SH3RF1-201ENST00000284637 HNRNPFP52597 415 aaKnown RBP16.09■□□□□ 0.17
SH3RF1-201ENST00000284637 TXNL4AP83876 142 aaKnown RBP16.09■□□□□ 0.17
SH3RF1-201ENST00000284637 BTBD16Q32M84 506 aa16.09■□□□□ 0.17
SH3RF1-201ENST00000284637 KLHL22Q53GT1 634 aa16.09■□□□□ 0.17
SH3RF1-201ENST00000284637 CRB2Q5IJ48 1285 aa16.09■□□□□ 0.17
SH3RF1-201ENST00000284637 KIAA1161Q6NSJ0 714 aa16.09■□□□□ 0.17
SH3RF1-201ENST00000284637 RBM23Q86U06 439 aaKnown RBP16.09■□□□□ 0.17
SH3RF1-201ENST00000284637 SRFBP1Q8NEF9 429 aaKnown RBP16.09■□□□□ 0.17
SH3RF1-201ENST00000284637 MINDY3Q9H8M7 445 aa16.09■□□□□ 0.17
SH3RF1-201ENST00000284637 FZD4Q9ULV1 537 aa16.09■□□□□ 0.17
SH3RF1-201ENST00000284637 PLSCR1O15162 318 aa16.08■□□□□ 0.17
SH3RF1-201ENST00000284637 POP4O95707 220 aaKnown RBP16.08■□□□□ 0.17
SH3RF1-201ENST00000284637 PIGRP01833 764 aa16.08■□□□□ 0.17
SH3RF1-201ENST00000284637 C7P10643 843 aa16.08■□□□□ 0.17
SH3RF1-201ENST00000284637 CLEC12AQ5QGZ9 265 aa16.08■□□□□ 0.17
SH3RF1-201ENST00000284637 CCBE1Q6UXH8 406 aaPredicted RBP16.08■□□□□ 0.17
SH3RF1-201ENST00000284637 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.08■□□□□ 0.17
SH3RF1-201ENST00000284637 PHC3Q8NDX5 983 aa16.08■□□□□ 0.17
SH3RF1-201ENST00000284637 DNAJB8Q8NHS0 232 aa16.08■□□□□ 0.17
SH3RF1-201ENST00000284637 ADAMTS10Q9H324 1103 aa16.08■□□□□ 0.17
SH3RF1-201ENST00000284637 USP29Q9HBJ7 922 aa16.08■□□□□ 0.17
SH3RF1-201ENST00000284637 ZIM2Q9NZV7 527 aa16.08■□□□□ 0.17
SH3RF1-201ENST00000284637 A0A0G2JN53 185 aa16.08■□□□□ 0.16
SH3RF1-201ENST00000284637 A0A1W2PRB8 838 aa16.08■□□□□ 0.16
SH3RF1-201ENST00000284637 HCRTO43612 131 aa16.08■□□□□ 0.16
SH3RF1-201ENST00000284637 PRPS1L1P21108 318 aa16.08■□□□□ 0.16
SH3RF1-201ENST00000284637 CREMQ03060 361 aa16.08■□□□□ 0.16
SH3RF1-201ENST00000284637 TCEAL5Q5H9L2 206 aa16.08■□□□□ 0.16
SH3RF1-201ENST00000284637 ALDH16A1Q8IZ83 802 aa16.08■□□□□ 0.16
SH3RF1-201ENST00000284637 OR5AK3PQ8NH89 298 aa16.08■□□□□ 0.16
SH3RF1-201ENST00000284637 UTP4Q969X6 686 aaKnown RBP16.08■□□□□ 0.16
SH3RF1-201ENST00000284637 AURKBQ96GD4 344 aaPredicted RBP16.08■□□□□ 0.16
SH3RF1-201ENST00000284637 ZNF486Q96H40 463 aaPredicted RBP16.08■□□□□ 0.16
SH3RF1-201ENST00000284637 SLC35G5Q96KT7 338 aa16.08■□□□□ 0.16
SH3RF1-201ENST00000284637 C5orf34Q96MH7 638 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms