RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 C18orf21Q32NC0 220 aaPredicted RBP12.58□□□□□ -0.4
C9orf3-201ENST00000277198 GGTA1PQ4G0N0 100 aa12.58□□□□□ -0.4
C9orf3-201ENST00000277198 USP39Q53GS9 565 aaKnown RBP12.58□□□□□ -0.4
C9orf3-201ENST00000277198 SPANXN4Q5MJ08 99 aa12.58□□□□□ -0.4
C9orf3-201ENST00000277198 LINGO4Q6UY18 593 aa12.58□□□□□ -0.4
C9orf3-201ENST00000277198 NPAS3Q8IXF0 933 aa12.58□□□□□ -0.4
C9orf3-201ENST00000277198 MSRB3Q8IXL7 192 aa12.58□□□□□ -0.4
C9orf3-201ENST00000277198 SPARTQ8N0X7 666 aa12.58□□□□□ -0.4
C9orf3-201ENST00000277198 ELMOD1Q8N336 334 aa12.58□□□□□ -0.4
C9orf3-201ENST00000277198 LIX1Q8N485 282 aa12.58□□□□□ -0.4
C9orf3-201ENST00000277198 HJURPQ8NCD3 748 aaPredicted RBP12.58□□□□□ -0.4
C9orf3-201ENST00000277198 ZNF566Q969W8 418 aa12.58□□□□□ -0.4
C9orf3-201ENST00000277198 ASIC4Q96FT7 647 aa12.58□□□□□ -0.4
C9orf3-201ENST00000277198 PHF12Q96QT6 1004 aa12.58□□□□□ -0.4
C9orf3-201ENST00000277198 PAIP1Q9H074 479 aaKnown RBP12.58□□□□□ -0.4
C9orf3-201ENST00000277198 GKN1Q9NS71 199 aa12.58□□□□□ -0.4
C9orf3-201ENST00000277198 SLC25A37Q9NYZ2 338 aa12.58□□□□□ -0.4
C9orf3-201ENST00000277198 ZNF490Q9ULM2 529 aaPredicted RBP12.58□□□□□ -0.4
C9orf3-201ENST00000277198 B3GNT3Q9Y2A9 372 aa12.58□□□□□ -0.4
C9orf3-201ENST00000277198 NAALAD2Q9Y3Q0 740 aa12.58□□□□□ -0.4
C9orf3-201ENST00000277198 PCDHGB1Q9Y5G3 927 aa12.58□□□□□ -0.4
C9orf3-201ENST00000277198 PCDHGA8Q9Y5G5 932 aa12.58□□□□□ -0.4
C9orf3-201ENST00000277198 hCG_2014768A0A024R1R8 64 aa12.58□□□□□ -0.4
C9orf3-201ENST00000277198 A0A096LPI6 279 aa12.58□□□□□ -0.4
C9orf3-201ENST00000277198 AGAP14A8MT82 685 aa12.58□□□□□ -0.4
C9orf3-201ENST00000277198 SEC22BO75396 215 aa12.58□□□□□ -0.4
C9orf3-201ENST00000277198 CREG1O75629 220 aa12.58□□□□□ -0.4
C9orf3-201ENST00000277198 STK16O75716 305 aa12.58□□□□□ -0.4
C9orf3-201ENST00000277198 CLDN9O95484 217 aa12.58□□□□□ -0.4
C9orf3-201ENST00000277198 GUCA1CO95843 209 aa12.58□□□□□ -0.4
C9orf3-201ENST00000277198 TRBC1P01850 177 aa12.58□□□□□ -0.4
C9orf3-201ENST00000277198 PCNAP12004 261 aa12.58□□□□□ -0.4
C9orf3-201ENST00000277198 ITIH1P19827 911 aa12.58□□□□□ -0.4
C9orf3-201ENST00000277198 GGT5P36269 586 aa12.58□□□□□ -0.4
C9orf3-201ENST00000277198 GRAMD4Q6IC98 578 aa12.58□□□□□ -0.4
C9orf3-201ENST00000277198 RETSATQ6NUM9 610 aa12.58□□□□□ -0.4
C9orf3-201ENST00000277198 PARM1Q6UWI2 310 aa12.58□□□□□ -0.4
C9orf3-201ENST00000277198 ENPP6Q6UWR7 440 aa12.58□□□□□ -0.4
C9orf3-201ENST00000277198 FAM151BQ6UXP7 276 aa12.58□□□□□ -0.4
C9orf3-201ENST00000277198 RGL4Q8IZJ4 473 aa12.58□□□□□ -0.4
C9orf3-201ENST00000277198 TCAIMQ8N3R3 496 aa12.58□□□□□ -0.4
C9orf3-201ENST00000277198 CHDHQ8NE62 594 aaPredicted RBP12.58□□□□□ -0.4
C9orf3-201ENST00000277198 FBXO30Q8TB52 745 aa12.58□□□□□ -0.4
C9orf3-201ENST00000277198 FBLIM1Q8WUP2 373 aa12.58□□□□□ -0.4
C9orf3-201ENST00000277198 SNX19Q92543 992 aa12.58□□□□□ -0.4
C9orf3-201ENST00000277198 FGF14Q92915 247 aa12.58□□□□□ -0.4
C9orf3-201ENST00000277198 ABTB1Q969K4 478 aaPredicted RBP12.58□□□□□ -0.4
C9orf3-201ENST00000277198 ULK4Q96C45 1275 aa12.58□□□□□ -0.4
C9orf3-201ENST00000277198 COX4I2Q96KJ9 171 aa12.58□□□□□ -0.4
C9orf3-201ENST00000277198 MAGEB10Q96LZ2 347 aaPredicted RBP12.58□□□□□ -0.4
C9orf3-201ENST00000277198 OR52E6Q96RD3 313 aa12.58□□□□□ -0.4
C9orf3-201ENST00000277198 MBOAT4Q96T53 435 aa12.58□□□□□ -0.4
C9orf3-201ENST00000277198 HBEGFQ99075 208 aa12.58□□□□□ -0.4
C9orf3-201ENST00000277198 ADNPQ9H2P0 1102 aa12.58□□□□□ -0.4
C9orf3-201ENST00000277198 IL26Q9NPH9 171 aa12.58□□□□□ -0.4
C9orf3-201ENST00000277198 KLQ9UEF7 1012 aa12.58□□□□□ -0.4
C9orf3-201ENST00000277198 VPS51Q9UID3 782 aa12.58□□□□□ -0.4
C9orf3-201ENST00000277198 TMED5Q9Y3A6 229 aa12.58□□□□□ -0.4
C9orf3-201ENST00000277198 GLYATL1P3A0A0U1RQE8 302 aa12.57□□□□□ -0.4
C9orf3-201ENST00000277198 CXorf51AA0A1B0GTR3 108 aa12.57□□□□□ -0.4
C9orf3-201ENST00000277198 LOC100130705A0A1B0GUX0 176 aa12.57□□□□□ -0.4
C9orf3-201ENST00000277198 TMEM221A6NGB7 291 aa12.57□□□□□ -0.4
C9orf3-201ENST00000277198 M0QX08 132 aa12.57□□□□□ -0.4
C9orf3-201ENST00000277198 M0R296 226 aa12.57□□□□□ -0.4
C9orf3-201ENST00000277198 GFRA2O00451 464 aa12.57□□□□□ -0.4
C9orf3-201ENST00000277198 WNT9AO14904 365 aa12.57□□□□□ -0.4
C9orf3-201ENST00000277198 TSPAN3O60637 253 aa12.57□□□□□ -0.4
C9orf3-201ENST00000277198 MOSPD3O75425 235 aa12.57□□□□□ -0.4
C9orf3-201ENST00000277198 PRKD3O94806 890 aa12.57□□□□□ -0.4
C9orf3-201ENST00000277198 PRAMEF12O95522 483 aa12.57□□□□□ -0.4
C9orf3-201ENST00000277198 ANXA5P08758 320 aa12.57□□□□□ -0.4
C9orf3-201ENST00000277198 UGT1A1P22309 533 aa12.57□□□□□ -0.4
C9orf3-201ENST00000277198 UGT1A4P22310 534 aa12.57□□□□□ -0.4
C9orf3-201ENST00000277198 MAPK1P28482 360 aa12.57□□□□□ -0.4
C9orf3-201ENST00000277198 UGT1A3P35503 534 aa12.57□□□□□ -0.4
C9orf3-201ENST00000277198 UGT1A5P35504 534 aa12.57□□□□□ -0.4
C9orf3-201ENST00000277198 DCTP40126 519 aa12.57□□□□□ -0.4
C9orf3-201ENST00000277198 TPD52P55327 224 aaPredicted RBP12.57□□□□□ -0.4
C9orf3-201ENST00000277198 ISL1P61371 349 aa12.57□□□□□ -0.4
C9orf3-201ENST00000277198 ABHD18Q0P651 414 aa12.57□□□□□ -0.4
C9orf3-201ENST00000277198 PON2Q15165 354 aa12.57□□□□□ -0.4
C9orf3-201ENST00000277198 PRSS36Q5K4E3 855 aa12.57□□□□□ -0.4
C9orf3-201ENST00000277198 CHST15Q7LFX5 561 aaPredicted RBP12.57□□□□□ -0.4
C9orf3-201ENST00000277198 TMEM132CQ8N3T6 1108 aa12.57□□□□□ -0.4
C9orf3-201ENST00000277198 TESCQ96BS2 214 aa12.57□□□□□ -0.4
C9orf3-201ENST00000277198 ALG14Q96F25 216 aa12.57□□□□□ -0.4
C9orf3-201ENST00000277198 REXO5Q96IC2 774 aaKnown RBP12.57□□□□□ -0.4
C9orf3-201ENST00000277198 ITCHQ96J02 903 aa12.57□□□□□ -0.4
C9orf3-201ENST00000277198 PLEKHA8Q96JA3 519 aa12.57□□□□□ -0.4
C9orf3-201ENST00000277198 LYSMD1Q96S90 227 aa12.57□□□□□ -0.4
C9orf3-201ENST00000277198 C2orf49Q9BVC5 232 aaPredicted RBP12.57□□□□□ -0.4
C9orf3-201ENST00000277198 AMBRA1Q9C0C7 1298 aa12.57□□□□□ -0.4
C9orf3-201ENST00000277198 CARS2Q9HA77 564 aaKnown RBP12.57□□□□□ -0.4
C9orf3-201ENST00000277198 ZNF334Q9HCZ1 680 aaPredicted RBP12.57□□□□□ -0.4
C9orf3-201ENST00000277198 IRAK4Q9NWZ3 460 aa12.57□□□□□ -0.4
C9orf3-201ENST00000277198 RHBDL2Q9NX52 303 aa12.57□□□□□ -0.4
C9orf3-201ENST00000277198 CHCHD3Q9NX63 227 aaKnown RBP12.57□□□□□ -0.4
C9orf3-201ENST00000277198 KCTD5Q9NXV2 234 aa12.57□□□□□ -0.4
C9orf3-201ENST00000277198 MRPS23Q9Y3D9 190 aaKnown RBP12.57□□□□□ -0.4
C9orf3-201ENST00000277198 ORC6Q9Y5N6 252 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms