RNA–Protein interactions for RNA: ENST00000274030.10

USP53-201, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP53, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-201ENST00000274030 CLCA3PQ9Y6N3 262 aa11.2□□□□□ -0.62
USP53-201ENST00000274030 A0A0U1RQF3 1178 aa11.2□□□□□ -0.62
USP53-201ENST00000274030 ILVBLA1L0T0 632 aa11.2□□□□□ -0.62
USP53-201ENST00000274030 LOC730098B7Z3J9 87 aa11.2□□□□□ -0.62
USP53-201ENST00000274030 C8orf89P0DMQ9 161 aa11.2□□□□□ -0.62
USP53-201ENST00000274030 ADH5P11766 374 aa11.2□□□□□ -0.62
USP53-201ENST00000274030 HLA-EP13747 358 aa11.2□□□□□ -0.62
USP53-201ENST00000274030 BTN3A2P78410 334 aa11.2□□□□□ -0.62
USP53-201ENST00000274030 GPR33Q49SQ1 333 aa11.2□□□□□ -0.62
USP53-201ENST00000274030 TPGS2Q68CL5 300 aa11.2□□□□□ -0.62
USP53-201ENST00000274030 RASSF6Q6ZTQ3 369 aa11.2□□□□□ -0.62
USP53-201ENST00000274030 NUP54Q7Z3B4 507 aa11.2□□□□□ -0.62
USP53-201ENST00000274030 GJD3Q8N144 294 aa11.2□□□□□ -0.62
USP53-201ENST00000274030 OR2AP1Q8NGE2 309 aa11.2□□□□□ -0.62
USP53-201ENST00000274030 DMRTB1Q96MA1 342 aa11.2□□□□□ -0.62
USP53-201ENST00000274030 KCNA7Q96RP8 456 aa11.2□□□□□ -0.62
USP53-201ENST00000274030 HCN3Q9P1Z3 774 aa11.2□□□□□ -0.62
USP53-201ENST00000274030 MPZL2O60487 215 aa11.2□□□□□ -0.62
USP53-201ENST00000274030 POP7O75817 140 aaKnown RBP11.2□□□□□ -0.62
USP53-201ENST00000274030 CH25HO95992 272 aa11.2□□□□□ -0.62
USP53-201ENST00000274030 VARSP26640 1264 aaKnown RBP11.2□□□□□ -0.62
USP53-201ENST00000274030 RAB8AP61006 207 aa11.2□□□□□ -0.62
USP53-201ENST00000274030 SCN1BQ07699 218 aa11.2□□□□□ -0.62
USP53-201ENST00000274030 SWI5Q1ZZU3 235 aa11.2□□□□□ -0.62
USP53-201ENST00000274030 LCN1P1Q5VSP4 162 aa11.2□□□□□ -0.62
USP53-201ENST00000274030 LINGO2Q7L985 606 aa11.2□□□□□ -0.62
USP53-201ENST00000274030 SLC35F5Q8WV83 523 aa11.2□□□□□ -0.62
USP53-201ENST00000274030 CHIAQ9BZP6 476 aa11.2□□□□□ -0.62
USP53-201ENST00000274030 COMMD4Q9H0A8 199 aa11.2□□□□□ -0.62
USP53-201ENST00000274030 TOR3AQ9H497 397 aa11.2□□□□□ -0.62
USP53-201ENST00000274030 TCF7L1Q9HCS4 588 aa11.2□□□□□ -0.62
USP53-201ENST00000274030 MRPS17Q9Y2R5 130 aaKnown RBP11.2□□□□□ -0.62
USP53-201ENST00000274030 SPIN1Q9Y657 262 aaPredicted RBP11.2□□□□□ -0.62
USP53-201ENST00000274030 FER1L4A9Z1Z3 1794 aa11.2□□□□□ -0.62
USP53-201ENST00000274030 A0A0X1KG70 313 aa11.2□□□□□ -0.62
USP53-201ENST00000274030 ANKRD66B4E2M5 251 aa11.2□□□□□ -0.62
USP53-201ENST00000274030 TMEM150CB9EJG8 249 aa11.2□□□□□ -0.62
USP53-201ENST00000274030 TBX1O43435 398 aa11.2□□□□□ -0.62
USP53-201ENST00000274030 CLPXO76031 633 aa11.2□□□□□ -0.62
USP53-201ENST00000274030 PRAMEF12O95522 483 aa11.2□□□□□ -0.62
USP53-201ENST00000274030 CSN2P05814 226 aa11.2□□□□□ -0.62
USP53-201ENST00000274030 BCHEP06276 602 aa11.2□□□□□ -0.62
USP53-201ENST00000274030 S100A9P06702 114 aaKnown RBP11.2□□□□□ -0.62
USP53-201ENST00000274030 NUDT6P53370 316 aa11.2□□□□□ -0.62
USP53-201ENST00000274030 GPX6P59796 221 aa11.2□□□□□ -0.62
USP53-201ENST00000274030 OLFML1Q6UWY5 402 aa11.2□□□□□ -0.62
USP53-201ENST00000274030 MBOAT1Q6ZNC8 495 aa11.2□□□□□ -0.62
USP53-201ENST00000274030 NUDT13Q86X67 352 aa11.2□□□□□ -0.62
USP53-201ENST00000274030 OR5K1Q8NHB7 308 aa11.2□□□□□ -0.62
USP53-201ENST00000274030 CPNE3O75131 537 aaKnown RBP11.2□□□□□ -0.62
USP53-201ENST00000274030 PRPS1L1P21108 318 aa11.2□□□□□ -0.62
USP53-201ENST00000274030 FSHRP23945 695 aa11.2□□□□□ -0.62
USP53-201ENST00000274030 CCNFP41002 786 aa11.2□□□□□ -0.62
USP53-201ENST00000274030 ALDH3A2P51648 485 aa11.2□□□□□ -0.62
USP53-201ENST00000274030 CCNHP51946 323 aaPredicted RBP11.2□□□□□ -0.62
USP53-201ENST00000274030 CDH15P55291 814 aa11.2□□□□□ -0.62
USP53-201ENST00000274030 UFM1P61960 85 aa11.2□□□□□ -0.62
USP53-201ENST00000274030 FRG2Q64ET8 278 aa11.2□□□□□ -0.62
USP53-201ENST00000274030 GRASPQ7Z6J2 395 aaPredicted RBP11.2□□□□□ -0.62
USP53-201ENST00000274030 GALNT7Q86SF2 657 aa11.2□□□□□ -0.62
USP53-201ENST00000274030 ZC3HC1Q86WB0 502 aaKnown RBP11.2□□□□□ -0.62
USP53-201ENST00000274030 TSTD1Q8NFU3 115 aa11.2□□□□□ -0.62
USP53-201ENST00000274030 OR4E2Q8NGC2 313 aa11.2□□□□□ -0.62
USP53-201ENST00000274030 OR5M3Q8NGP4 307 aa11.2□□□□□ -0.62
USP53-201ENST00000274030 PLEKHO2Q8TD55 490 aa11.2□□□□□ -0.62
USP53-201ENST00000274030 FRG2BQ96QU4 278 aa11.2□□□□□ -0.62
USP53-201ENST00000274030 SLC32A1Q9H598 525 aa11.2□□□□□ -0.62
USP53-201ENST00000274030 KAT8Q9H7Z6 458 aaKnown RBP11.2□□□□□ -0.62
USP53-201ENST00000274030 CENPMQ9NSP4 180 aa11.2□□□□□ -0.62
USP53-201ENST00000274030 TLL2Q9Y6L7 1015 aa11.2□□□□□ -0.62
USP53-201ENST00000274030 FABP12A6NFH5 140 aa11.19□□□□□ -0.62
USP53-201ENST00000274030 ELOA3DA6NLF2 546 aaPredicted RBP11.19□□□□□ -0.62
USP53-201ENST00000274030 KHNYNO15037 678 aaKnown RBP11.19□□□□□ -0.62
USP53-201ENST00000274030 MLLT6P55198 1093 aaPredicted RBP11.19□□□□□ -0.62
USP53-201ENST00000274030 ELOA3BQ3SY89 546 aa11.19□□□□□ -0.62
USP53-201ENST00000274030 SUSD1Q6UWL2 747 aa11.19□□□□□ -0.62
USP53-201ENST00000274030 ZNF554Q86TJ5 538 aa11.19□□□□□ -0.62
USP53-201ENST00000274030 ELOA3Q8NG57 546 aa11.19□□□□□ -0.62
USP53-201ENST00000274030 OR2L3Q8NG85 312 aa11.19□□□□□ -0.62
USP53-201ENST00000274030 OR4F6Q8NGB9 312 aa11.19□□□□□ -0.62
USP53-201ENST00000274030 UFD1Q92890 307 aa11.19□□□□□ -0.62
USP53-201ENST00000274030 FRMD6Q96NE9 622 aa11.19□□□□□ -0.62
USP53-201ENST00000274030 TMEM74Q96NL1 305 aa11.19□□□□□ -0.62
USP53-201ENST00000274030 SMOQ99835 787 aa11.19□□□□□ -0.62
USP53-201ENST00000274030 MAN2B2Q9Y2E5 1009 aa11.19□□□□□ -0.62
USP53-201ENST00000274030 H3BNX3 289 aa11.19□□□□□ -0.62
USP53-201ENST00000274030 ARPC2O15144 300 aa11.19□□□□□ -0.62
USP53-201ENST00000274030 ATP1B2P14415 290 aaPredicted RBP11.19□□□□□ -0.62
USP53-201ENST00000274030 CSNK2A2P19784 350 aaPredicted RBP11.19□□□□□ -0.62
USP53-201ENST00000274030 ACVR2AP27037 513 aa11.19□□□□□ -0.62
USP53-201ENST00000274030 LRRC66Q68CR7 880 aa11.19□□□□□ -0.62
USP53-201ENST00000274030 CLCC1Q96S66 551 aa11.19□□□□□ -0.62
USP53-201ENST00000274030 FBXL12Q9NXK8 326 aa11.19□□□□□ -0.62
USP53-201ENST00000274030 SQORQ9Y6N5 450 aa11.19□□□□□ -0.62
USP53-201ENST00000274030 PCDHGA12O60330 932 aa11.19□□□□□ -0.62
USP53-201ENST00000274030 TBX10O75333 385 aa11.19□□□□□ -0.62
USP53-201ENST00000274030 FCER2P06734 321 aa11.19□□□□□ -0.62
USP53-201ENST00000274030 BLKP51451 505 aa11.19□□□□□ -0.62
USP53-201ENST00000274030 XKP51811 444 aa11.19□□□□□ -0.62
USP53-201ENST00000274030 MTTPP55157 894 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms