RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 UBA6A0AVT1 1052 aaPredicted RBP15.57■□□□□ 0.08
MAP1LC3B-201ENST00000268607 CRCPO75575 148 aa15.57■□□□□ 0.08
MAP1LC3B-201ENST00000268607 C8AP07357 584 aa15.57■□□□□ 0.08
MAP1LC3B-201ENST00000268607 ANXA6P08133 673 aa15.57■□□□□ 0.08
MAP1LC3B-201ENST00000268607 CTSAP10619 480 aa15.57■□□□□ 0.08
MAP1LC3B-201ENST00000268607 FMO3P31513 532 aa15.57■□□□□ 0.08
MAP1LC3B-201ENST00000268607 SLC11A2P49281 568 aa15.57■□□□□ 0.08
MAP1LC3B-201ENST00000268607 CDKN1CP49918 316 aaPredicted RBP15.57■□□□□ 0.08
MAP1LC3B-201ENST00000268607 IL5RAQ01344 420 aa15.57■□□□□ 0.08
MAP1LC3B-201ENST00000268607 CDK5R2Q13319 367 aa15.57■□□□□ 0.08
MAP1LC3B-201ENST00000268607 PLA2G4EQ3MJ16 856 aa15.57■□□□□ 0.08
MAP1LC3B-201ENST00000268607 HECTD3Q5T447 861 aa15.57■□□□□ 0.08
MAP1LC3B-201ENST00000268607 GAREM2Q75VX8 874 aa15.57■□□□□ 0.08
MAP1LC3B-201ENST00000268607 CADM2Q8N3J6 435 aa15.57■□□□□ 0.08
MAP1LC3B-201ENST00000268607 CLP1Q92989 425 aaKnown RBP15.57■□□□□ 0.08
MAP1LC3B-201ENST00000268607 DMRTB1Q96MA1 342 aa15.57■□□□□ 0.08
MAP1LC3B-201ENST00000268607 RDH12Q96NR8 316 aa15.57■□□□□ 0.08
MAP1LC3B-201ENST00000268607 CITED4Q96RK1 184 aa15.57■□□□□ 0.08
MAP1LC3B-201ENST00000268607 AIG1Q9NVV5 245 aa15.57■□□□□ 0.08
MAP1LC3B-201ENST00000268607 FBXO9Q9UK97 447 aaPredicted RBP15.57■□□□□ 0.08
MAP1LC3B-201ENST00000268607 BRWD1Q9NSI6 2320 aa15.57■□□□□ 0.08
MAP1LC3B-201ENST00000268607 MYOFQ9NZM1 2061 aa15.56■□□□□ 0.08
MAP1LC3B-201ENST00000268607 SNX2O60749 519 aa15.56■□□□□ 0.08
MAP1LC3B-201ENST00000268607 PAPSS2O95340 614 aaPredicted RBP15.56■□□□□ 0.08
MAP1LC3B-201ENST00000268607 GABRR2P28476 465 aa15.56■□□□□ 0.08
MAP1LC3B-201ENST00000268607 TUBA1BP68363 451 aa15.56■□□□□ 0.08
MAP1LC3B-201ENST00000268607 NFKB2Q00653 900 aa15.56■□□□□ 0.08
MAP1LC3B-201ENST00000268607 OR4D1Q15615 310 aa15.56■□□□□ 0.08
MAP1LC3B-201ENST00000268607 FXNQ16595 210 aa15.56■□□□□ 0.08
MAP1LC3B-201ENST00000268607 CDONQ4KMG0 1287 aa15.56■□□□□ 0.08
MAP1LC3B-201ENST00000268607 ZNF691Q5VV52 312 aa15.56■□□□□ 0.08
MAP1LC3B-201ENST00000268607 TUBA1AQ71U36 451 aa15.56■□□□□ 0.08
MAP1LC3B-201ENST00000268607 HID1Q8IV36 788 aa15.56■□□□□ 0.08
MAP1LC3B-201ENST00000268607 PJA1Q8NG27 643 aa15.56■□□□□ 0.08
MAP1LC3B-201ENST00000268607 SPPL3Q8TCT6 385 aa15.56■□□□□ 0.08
MAP1LC3B-201ENST00000268607 TCEAL4Q96EI5 215 aa15.56■□□□□ 0.08
MAP1LC3B-201ENST00000268607 CINPQ9BW66 212 aaPredicted RBP15.56■□□□□ 0.08
MAP1LC3B-201ENST00000268607 FAM50BQ9Y247 325 aa15.56■□□□□ 0.08
MAP1LC3B-201ENST00000268607 CAB39Q9Y376 341 aaPredicted RBP15.56■□□□□ 0.08
MAP1LC3B-201ENST00000268607 TYW5A2RUC4 315 aaKnown RBP15.56■□□□□ 0.08
MAP1LC3B-201ENST00000268607 PDZK1P1A8MUH7 402 aa15.56■□□□□ 0.08
MAP1LC3B-201ENST00000268607 H3BNC9 293 aa15.56■□□□□ 0.08
MAP1LC3B-201ENST00000268607 ERVH48-1M5A8F1 160 aa15.56■□□□□ 0.08
MAP1LC3B-201ENST00000268607 TMCC2O75069 709 aa15.56■□□□□ 0.08
MAP1LC3B-201ENST00000268607 STC2O76061 302 aa15.56■□□□□ 0.08
MAP1LC3B-201ENST00000268607 CD1DP15813 335 aa15.56■□□□□ 0.08
MAP1LC3B-201ENST00000268607 EPCAMP16422 314 aa15.56■□□□□ 0.08
MAP1LC3B-201ENST00000268607 CCR2P41597 374 aa15.56■□□□□ 0.08
MAP1LC3B-201ENST00000268607 EPS8Q12929 822 aa15.56■□□□□ 0.08
MAP1LC3B-201ENST00000268607 PSRC1Q6PGN9 363 aaPredicted RBP15.56■□□□□ 0.08
MAP1LC3B-201ENST00000268607 RAB44Q7Z6P3 723 aaPredicted RBP15.56■□□□□ 0.08
MAP1LC3B-201ENST00000268607 TMEM179BQ7Z7N9 219 aa15.56■□□□□ 0.08
MAP1LC3B-201ENST00000268607 PLD3Q8IV08 490 aa15.56■□□□□ 0.08
MAP1LC3B-201ENST00000268607 GALNT12Q8IXK2 581 aa15.56■□□□□ 0.08
MAP1LC3B-201ENST00000268607 C12orf76Q8N812 135 aaPredicted RBP15.56■□□□□ 0.08
MAP1LC3B-201ENST00000268607 MCFD2Q8NI22 146 aa15.56■□□□□ 0.08
MAP1LC3B-201ENST00000268607 TSPEARQ8WU66 669 aa15.56■□□□□ 0.08
MAP1LC3B-201ENST00000268607 ISG20Q96AZ6 181 aaKnown RBP15.56■□□□□ 0.08
MAP1LC3B-201ENST00000268607 RHNO1Q9BSD3 238 aa15.56■□□□□ 0.08
MAP1LC3B-201ENST00000268607 BPIFA1Q9NP55 256 aa15.56■□□□□ 0.08
MAP1LC3B-201ENST00000268607 UBA2Q9UBT2 640 aaPredicted RBP15.56■□□□□ 0.08
MAP1LC3B-201ENST00000268607 PCDHGA10Q9Y5H3 936 aa15.56■□□□□ 0.08
MAP1LC3B-201ENST00000268607 PRMT5O14744 637 aaPredicted RBP15.55■□□□□ 0.08
MAP1LC3B-201ENST00000268607 AREL1O15033 823 aa15.55■□□□□ 0.08
MAP1LC3B-201ENST00000268607 ANGPTL1O95841 491 aa15.55■□□□□ 0.08
MAP1LC3B-201ENST00000268607 MTHFD2P13995 350 aa15.55■□□□□ 0.08
MAP1LC3B-201ENST00000268607 GRK3P35626 688 aa15.55■□□□□ 0.08
MAP1LC3B-201ENST00000268607 RAPSNQ13702 412 aa15.55■□□□□ 0.08
MAP1LC3B-201ENST00000268607 NPTX1Q15818 432 aa15.55■□□□□ 0.08
MAP1LC3B-201ENST00000268607 AGAP6Q5VW22 663 aa15.55■□□□□ 0.08
MAP1LC3B-201ENST00000268607 NEK10Q6ZWH5 1172 aa15.55■□□□□ 0.08
MAP1LC3B-201ENST00000268607 KREMEN2Q8NCW0 462 aa15.55■□□□□ 0.08
MAP1LC3B-201ENST00000268607 IL17RDQ8NFM7 739 aa15.55■□□□□ 0.08
MAP1LC3B-201ENST00000268607 OR4K2Q8NGD2 314 aa15.55■□□□□ 0.08
MAP1LC3B-201ENST00000268607 OR4L1Q8NH43 312 aa15.55■□□□□ 0.08
MAP1LC3B-201ENST00000268607 BRSK1Q8TDC3 778 aa15.55■□□□□ 0.08
MAP1LC3B-201ENST00000268607 HERVK_113Q902F9 699 aa15.55■□□□□ 0.08
MAP1LC3B-201ENST00000268607 FATE1Q969F0 183 aa15.55■□□□□ 0.08
MAP1LC3B-201ENST00000268607 LGALS12Q96DT0 336 aa15.55■□□□□ 0.08
MAP1LC3B-201ENST00000268607 AGAP4Q96P64 663 aa15.55■□□□□ 0.08
MAP1LC3B-201ENST00000268607 ASB2Q96Q27 587 aa15.55■□□□□ 0.08
MAP1LC3B-201ENST00000268607 RBM4BQ9BQ04 359 aaKnown RBP15.55■□□□□ 0.08
MAP1LC3B-201ENST00000268607 BCL7BQ9BQE9 202 aa15.55■□□□□ 0.08
MAP1LC3B-201ENST00000268607 RBM4Q9BWF3 364 aaKnown RBP15.55■□□□□ 0.08
MAP1LC3B-201ENST00000268607 COMMD8Q9NX08 183 aa15.55■□□□□ 0.08
MAP1LC3B-201ENST00000268607 TRPM5Q9NZQ8 1165 aa15.55■□□□□ 0.08
MAP1LC3B-201ENST00000268607 SPEF1Q9Y4P9 236 aa15.55■□□□□ 0.08
MAP1LC3B-201ENST00000268607 U3KQV3 271 aa15.55■□□□□ 0.08
MAP1LC3B-201ENST00000268607 WISP3O95389 354 aaPredicted RBP15.55■□□□□ 0.08
MAP1LC3B-201ENST00000268607 NDST3O95803 873 aa15.55■□□□□ 0.08
MAP1LC3B-201ENST00000268607 FTH1P02794 183 aa15.55■□□□□ 0.08
MAP1LC3B-201ENST00000268607 FGF1P05230 155 aa15.55■□□□□ 0.08
MAP1LC3B-201ENST00000268607 RHOCP08134 193 aa15.55■□□□□ 0.08
MAP1LC3B-201ENST00000268607 BMP1P13497 986 aa15.55■□□□□ 0.08
MAP1LC3B-201ENST00000268607 HLA-DPA1P20036 260 aa15.55■□□□□ 0.08
MAP1LC3B-201ENST00000268607 ACVR2AP27037 513 aa15.55■□□□□ 0.08
MAP1LC3B-201ENST00000268607 PRDX3P30048 256 aaKnown RBP15.55■□□□□ 0.08
MAP1LC3B-201ENST00000268607 PPM1AP35813 382 aa15.55■□□□□ 0.08
MAP1LC3B-201ENST00000268607 TIAL1Q01085 375 aaKnown RBP eCLIP15.55■□□□□ 0.08
MAP1LC3B-201ENST00000268607 CLCA4Q14CN2 919 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms