RNA–Protein interactions for RNA: ENST00000266661.8

BEST3-201, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 1,876 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-201ENST00000266661 KRT6CP48668 564 aa12.12□□□□□ -0.47
BEST3-201ENST00000266661 MAPK10P53779 464 aa12.12□□□□□ -0.47
BEST3-201ENST00000266661 GSTM4Q03013 218 aa12.12□□□□□ -0.47
BEST3-201ENST00000266661 PIGFQ07326 219 aa12.12□□□□□ -0.47
BEST3-201ENST00000266661 BCL2L1Q07817 233 aa12.12□□□□□ -0.47
BEST3-201ENST00000266661 ABHD18Q0P651 414 aa12.12□□□□□ -0.47
BEST3-201ENST00000266661 PPP1R8Q12972 351 aaKnown RBP12.12□□□□□ -0.47
BEST3-201ENST00000266661 MTAPQ13126 283 aa12.12□□□□□ -0.47
BEST3-201ENST00000266661 CDK5R2Q13319 367 aa12.12□□□□□ -0.47
BEST3-201ENST00000266661 SPCS2Q15005 226 aa12.12□□□□□ -0.47
BEST3-201ENST00000266661 CTF1Q16619 201 aa12.12□□□□□ -0.47
BEST3-201ENST00000266661 RFX4Q33E94 735 aa12.12□□□□□ -0.47
BEST3-201ENST00000266661 CES5AQ6NT32 575 aa12.12□□□□□ -0.47
BEST3-201ENST00000266661 CRTC1Q6UUV9 634 aa12.12□□□□□ -0.47
BEST3-201ENST00000266661 TPGS1Q6ZTW0 290 aa12.12□□□□□ -0.47
BEST3-201ENST00000266661 MSANTD1Q6ZTZ1 278 aa12.12□□□□□ -0.47
BEST3-201ENST00000266661 TSPAN33Q86UF1 283 aa12.12□□□□□ -0.47
BEST3-201ENST00000266661 CYP4Z1Q86W10 505 aa12.12□□□□□ -0.47
BEST3-201ENST00000266661 ANKRD13BQ86YJ7 626 aa12.12□□□□□ -0.47
BEST3-201ENST00000266661 HIPK1Q86Z02 1210 aa12.12□□□□□ -0.47
BEST3-201ENST00000266661 EID3Q8N140 333 aa12.12□□□□□ -0.47
BEST3-201ENST00000266661 NRBF2Q96F24 287 aa12.12□□□□□ -0.47
BEST3-201ENST00000266661 COX4I2Q96KJ9 171 aa12.12□□□□□ -0.47
BEST3-201ENST00000266661 ADNPQ9H2P0 1102 aa12.12□□□□□ -0.47
BEST3-201ENST00000266661 C3orf18Q9UK00 162 aa12.12□□□□□ -0.47
BEST3-201ENST00000266661 LRFN2Q9ULH4 789 aa12.12□□□□□ -0.47
BEST3-201ENST00000266661 PRUNE2Q8WUY3 3088 aa12.11□□□□□ -0.47
BEST3-201ENST00000266661 PER2O15055 1255 aa12.11□□□□□ -0.47
BEST3-201ENST00000266661 SCN2BO60939 215 aa12.11□□□□□ -0.47
BEST3-201ENST00000266661 CBFA2T3O75081 653 aa12.11□□□□□ -0.47
BEST3-201ENST00000266661 RECQL5O94762 991 aaPredicted RBP12.11□□□□□ -0.47
BEST3-201ENST00000266661 UGT2B4P06133 528 aa12.11□□□□□ -0.47
BEST3-201ENST00000266661 ANXA5P08758 320 aa12.11□□□□□ -0.47
BEST3-201ENST00000266661 MYOGP15173 224 aa12.11□□□□□ -0.47
BEST3-201ENST00000266661 PCSK2P16519 638 aa12.11□□□□□ -0.47
BEST3-201ENST00000266661 JUNDP17535 347 aa12.11□□□□□ -0.47
BEST3-201ENST00000266661 CCR7P32248 378 aa12.11□□□□□ -0.47
BEST3-201ENST00000266661 MAPK8P45983 427 aa12.11□□□□□ -0.47
BEST3-201ENST00000266661 WDR5P61964 334 aaKnown RBP12.11□□□□□ -0.47
BEST3-201ENST00000266661 SLC14A1Q13336 389 aa12.11□□□□□ -0.47
BEST3-201ENST00000266661 CARD16Q5EG05 197 aa12.11□□□□□ -0.47
BEST3-201ENST00000266661 TPGS2Q68CL5 300 aa12.11□□□□□ -0.47
BEST3-201ENST00000266661 LAIR1Q6GTX8 287 aa12.11□□□□□ -0.47
BEST3-201ENST00000266661 CNKSR3Q6P9H4 555 aa12.11□□□□□ -0.47
BEST3-201ENST00000266661 SHQ1Q6PI26 577 aaKnown RBP12.11□□□□□ -0.47
BEST3-201ENST00000266661 ARL10Q8N8L6 244 aa12.11□□□□□ -0.47
BEST3-201ENST00000266661 MIPOL1Q8TD10 442 aa12.11□□□□□ -0.47
BEST3-201ENST00000266661 FAR1Q8WVX9 515 aa12.11□□□□□ -0.47
BEST3-201ENST00000266661 ECHDC3Q96DC8 303 aa12.11□□□□□ -0.47
BEST3-201ENST00000266661 FAM120BQ96EK7 910 aaKnown RBP12.11□□□□□ -0.47
BEST3-201ENST00000266661 CMTM7Q96FZ5 175 aa12.11□□□□□ -0.47
BEST3-201ENST00000266661 ITCHQ96J02 903 aa12.11□□□□□ -0.47
BEST3-201ENST00000266661 BARD1Q99728 777 aaKnown RBP12.11□□□□□ -0.47
BEST3-201ENST00000266661 SLC12A9Q9BXP2 914 aa12.11□□□□□ -0.47
BEST3-201ENST00000266661 PRO3102Q9H379 93 aa12.11□□□□□ -0.47
BEST3-201ENST00000266661 DUSP21Q9H596 190 aa12.11□□□□□ -0.47
BEST3-201ENST00000266661 IL21Q9HBE4 155 aa12.11□□□□□ -0.47
BEST3-201ENST00000266661 ZDHHC3Q9NYG2 299 aa12.11□□□□□ -0.47
BEST3-201ENST00000266661 CRLS1Q9UJA2 301 aa12.11□□□□□ -0.47
BEST3-201ENST00000266661 ERVK-11Q9UQG0 969 aa12.11□□□□□ -0.47
BEST3-201ENST00000266661 TDRKHQ9Y2W6 561 aaKnown RBP12.11□□□□□ -0.47
BEST3-201ENST00000266661 NPIPB15A6NHN6 443 aaPredicted RBP12.1□□□□□ -0.47
BEST3-201ENST00000266661 SCAMP3O14828 347 aaKnown RBP12.1□□□□□ -0.47
BEST3-201ENST00000266661 NOL3O60936 208 aaKnown RBP12.1□□□□□ -0.47
BEST3-201ENST00000266661 C1QCP02747 245 aa12.1□□□□□ -0.47
BEST3-201ENST00000266661 AOAHP28039 575 aa12.1□□□□□ -0.47
BEST3-201ENST00000266661 S100A3P33764 101 aa12.1□□□□□ -0.47
BEST3-201ENST00000266661 NSG1P42857 185 aa12.1□□□□□ -0.47
BEST3-201ENST00000266661 RPIAP49247 311 aa12.1□□□□□ -0.47
BEST3-201ENST00000266661 PHEXP78562 749 aa12.1□□□□□ -0.47
BEST3-201ENST00000266661 DGKKQ5KSL6 1271 aa12.1□□□□□ -0.47
BEST3-201ENST00000266661 RETSATQ6NUM9 610 aa12.1□□□□□ -0.47
BEST3-201ENST00000266661 NEK5Q6P3R8 708 aa12.1□□□□□ -0.47
BEST3-201ENST00000266661 LRRC70Q7Z2Q7 622 aa12.1□□□□□ -0.47
BEST3-201ENST00000266661 DNAJB7Q7Z6W7 309 aaPredicted RBP12.1□□□□□ -0.47
BEST3-201ENST00000266661 CPA6Q8N4T0 437 aa12.1□□□□□ -0.47
BEST3-201ENST00000266661 ABHD11Q8NFV4 315 aa12.1□□□□□ -0.47
BEST3-201ENST00000266661 ULK4Q96C45 1275 aa12.1□□□□□ -0.47
BEST3-201ENST00000266661 MTFMTQ96DP5 389 aaKnown RBP12.1□□□□□ -0.47
BEST3-201ENST00000266661 IGSF21Q96ID5 467 aa12.1□□□□□ -0.47
BEST3-201ENST00000266661 LMLNQ96KR4 655 aa12.1□□□□□ -0.47
BEST3-201ENST00000266661 NODALQ96S42 347 aa12.1□□□□□ -0.47
BEST3-201ENST00000266661 ZNF334Q9HCZ1 680 aaPredicted RBP12.1□□□□□ -0.47
BEST3-201ENST00000266661 GPRC5BQ9NZH0 403 aa12.1□□□□□ -0.47
BEST3-201ENST00000266661 MBD1Q9UIS9 605 aaPredicted RBP12.1□□□□□ -0.47
BEST3-201ENST00000266661 BLOC1S6Q9UL45 172 aa12.1□□□□□ -0.47
BEST3-201ENST00000266661 TMPRSS11EQ9UL52 423 aa12.1□□□□□ -0.47
BEST3-201ENST00000266661 CLEC4EQ9ULY5 219 aa12.1□□□□□ -0.47
BEST3-201ENST00000266661 PLXNB3Q9ULL4 1909 aa12.1□□□□□ -0.47
BEST3-201ENST00000266661 COL4A6Q14031 1691 aa12.1□□□□□ -0.47
BEST3-201ENST00000266661 J3QRK9 145 aa12.1□□□□□ -0.47
BEST3-201ENST00000266661 GNGT2O14610 69 aa12.1□□□□□ -0.47
BEST3-201ENST00000266661 HS6ST1O60243 411 aa12.1□□□□□ -0.47
BEST3-201ENST00000266661 NUAK1O60285 661 aa12.1□□□□□ -0.47
BEST3-201ENST00000266661 MITFO75030 526 aaPredicted RBP12.1□□□□□ -0.47
BEST3-201ENST00000266661 UGT2B11O75310 529 aa12.1□□□□□ -0.47
BEST3-201ENST00000266661 INMTO95050 263 aa12.1□□□□□ -0.47
BEST3-201ENST00000266661 FUCA1P04066 466 aa12.1□□□□□ -0.47
BEST3-201ENST00000266661 GSNP06396 782 aa12.1□□□□□ -0.47
BEST3-201ENST00000266661 MYCLP1P12525 358 aaPredicted RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms