RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 MCCC1Q96RQ3 725 aaPredicted RBP11.8□□□□□ -0.52
SMG6-201ENST00000263073 TWNKQ96RR1 684 aa11.8□□□□□ -0.52
SMG6-201ENST00000263073 CGREF1Q99674 301 aa11.8□□□□□ -0.52
SMG6-201ENST00000263073 TRPS1Q9UHF7 1281 aa11.8□□□□□ -0.52
SMG6-201ENST00000263073 ARL5CA6NH57 179 aa11.79□□□□□ -0.52
SMG6-201ENST00000263073 J3KR12 359 aa11.79□□□□□ -0.52
SMG6-201ENST00000263073 OR7A10O76100 309 aa11.79□□□□□ -0.52
SMG6-201ENST00000263073 SORBS2O94875 1100 aaKnown RBP11.79□□□□□ -0.52
SMG6-201ENST00000263073 CD40LGP29965 261 aa11.79□□□□□ -0.52
SMG6-201ENST00000263073 OR12D2P58182 307 aa11.79□□□□□ -0.52
SMG6-201ENST00000263073 NPY5RQ15761 445 aa11.79□□□□□ -0.52
SMG6-201ENST00000263073 NXPE1Q8N323 547 aa11.79□□□□□ -0.52
SMG6-201ENST00000263073 ARL14EPQ8N8R7 260 aaPredicted RBP11.79□□□□□ -0.52
SMG6-201ENST00000263073 TMEM209Q96SK2 561 aa11.79□□□□□ -0.52
SMG6-201ENST00000263073 COMMD4Q9H0A8 199 aa11.79□□□□□ -0.52
SMG6-201ENST00000263073 ZBTB26Q9HCK0 441 aa11.79□□□□□ -0.52
SMG6-201ENST00000263073 FARSAQ9Y285 508 aaKnown RBP11.79□□□□□ -0.52
SMG6-201ENST00000263073 C13orf42A0A1B0GVH6 325 aa11.79□□□□□ -0.52
SMG6-201ENST00000263073 FANCGO15287 622 aa11.79□□□□□ -0.52
SMG6-201ENST00000263073 HTRA2O43464 458 aaPredicted RBP11.79□□□□□ -0.52
SMG6-201ENST00000263073 RNASEH2AO75792 299 aaKnown RBP11.79□□□□□ -0.52
SMG6-201ENST00000263073 CXCL14O95715 111 aa11.79□□□□□ -0.52
SMG6-201ENST00000263073 RPLP2P05387 115 aaKnown RBP11.79□□□□□ -0.52
SMG6-201ENST00000263073 EDNRAP25101 427 aa11.79□□□□□ -0.52
SMG6-201ENST00000263073 S100A10P60903 97 aa11.79□□□□□ -0.52
SMG6-201ENST00000263073 CHAF1BQ13112 559 aa11.79□□□□□ -0.52
SMG6-201ENST00000263073 GPR68Q15743 365 aa11.79□□□□□ -0.52
SMG6-201ENST00000263073 TBRG1Q3YBR2 411 aa11.79□□□□□ -0.52
SMG6-201ENST00000263073 KLHL26Q53HC5 615 aa11.79□□□□□ -0.52
SMG6-201ENST00000263073 SLITRK4Q8IW52 837 aa11.79□□□□□ -0.52
SMG6-201ENST00000263073 OR8S1Q8NH09 359 aa11.79□□□□□ -0.52
SMG6-201ENST00000263073 SLC35B2Q8TB61 432 aa11.79□□□□□ -0.52
SMG6-201ENST00000263073 BRSK1Q8TDC3 778 aa11.79□□□□□ -0.52
SMG6-201ENST00000263073 SLC25A36Q96CQ1 311 aa11.79□□□□□ -0.52
SMG6-201ENST00000263073 DNAJA3Q96EY1 480 aa11.79□□□□□ -0.52
SMG6-201ENST00000263073 TTPALQ9BTX7 342 aa11.79□□□□□ -0.52
SMG6-201ENST00000263073 OXCT2Q9BYC2 517 aaPredicted RBP11.79□□□□□ -0.52
SMG6-201ENST00000263073 A0A1B0GVT2 93 aa11.79□□□□□ -0.52
SMG6-201ENST00000263073 KANTRA0A1W2PQU2 76 aa11.79□□□□□ -0.52
SMG6-201ENST00000263073 H3BNH8 94 aa11.79□□□□□ -0.52
SMG6-201ENST00000263073 KERAO60938 352 aa11.79□□□□□ -0.52
SMG6-201ENST00000263073 CKMT1AP12532 417 aa11.79□□□□□ -0.52
SMG6-201ENST00000263073 HTR1BP28222 390 aa11.79□□□□□ -0.52
SMG6-201ENST00000263073 DAOAP59103 153 aa11.79□□□□□ -0.52
SMG6-201ENST00000263073 LILRA4P59901 499 aa11.79□□□□□ -0.52
SMG6-201ENST00000263073 PPP3R1P63098 170 aa11.79□□□□□ -0.52
SMG6-201ENST00000263073 MPP2Q14168 576 aa11.79□□□□□ -0.52
SMG6-201ENST00000263073 SLC10A6Q3KNW5 377 aa11.79□□□□□ -0.52
SMG6-201ENST00000263073 SIRPB2Q5JXA9 342 aa11.79□□□□□ -0.52
SMG6-201ENST00000263073 MSANTD3Q96H12 275 aa11.79□□□□□ -0.52
SMG6-201ENST00000263073 TSPAN18Q96SJ8 248 aa11.79□□□□□ -0.52
SMG6-201ENST00000263073 FAM83DQ9H4H8 585 aa11.79□□□□□ -0.52
SMG6-201ENST00000263073 HMX1Q9NP08 348 aaPredicted RBP11.79□□□□□ -0.52
SMG6-201ENST00000263073 ZNF639Q9UID6 485 aa11.79□□□□□ -0.52
SMG6-201ENST00000263073 A0A1W2PRB8 838 aa11.79□□□□□ -0.52
SMG6-201ENST00000263073 CACNB4O00305 520 aaPredicted RBP11.79□□□□□ -0.52
SMG6-201ENST00000263073 PPEF2O14830 753 aa11.79□□□□□ -0.52
SMG6-201ENST00000263073 LYPLA2O95372 231 aa11.79□□□□□ -0.52
SMG6-201ENST00000263073 IGFBP4P22692 258 aa11.79□□□□□ -0.52
SMG6-201ENST00000263073 FSHRP23945 695 aa11.79□□□□□ -0.52
SMG6-201ENST00000263073 NFE2L1Q14494 772 aa11.79□□□□□ -0.52
SMG6-201ENST00000263073 PRSS55Q6UWB4 352 aaPredicted RBP11.79□□□□□ -0.52
SMG6-201ENST00000263073 HFE2Q6ZVN8 426 aa11.79□□□□□ -0.52
SMG6-201ENST00000263073 KLHL36Q8N4N3 616 aa11.79□□□□□ -0.52
SMG6-201ENST00000263073 PPTC7Q8NI37 304 aa11.79□□□□□ -0.52
SMG6-201ENST00000263073 C1orf216Q8TAB5 229 aa11.79□□□□□ -0.52
SMG6-201ENST00000263073 SOCS4Q8WXH5 440 aa11.79□□□□□ -0.52
SMG6-201ENST00000263073 MUS81Q96NY9 551 aa11.79□□□□□ -0.52
SMG6-201ENST00000263073 TRPV4Q9HBA0 871 aa11.79□□□□□ -0.52
SMG6-201ENST00000263073 IGSF9Q9P2J2 1179 aa11.79□□□□□ -0.52
SMG6-201ENST00000263073 RPL36Q9Y3U8 105 aaKnown RBP11.79□□□□□ -0.52
SMG6-201ENST00000263073 FAM159BA6NKW6 160 aa11.79□□□□□ -0.52
SMG6-201ENST00000263073 AQP12BA6NM10 295 aa11.79□□□□□ -0.52
SMG6-201ENST00000263073 TLX2O43763 284 aaPredicted RBP11.79□□□□□ -0.52
SMG6-201ENST00000263073 GRIN3BO60391 1043 aa11.79□□□□□ -0.52
SMG6-201ENST00000263073 KLK1P06870 262 aa11.79□□□□□ -0.52
SMG6-201ENST00000263073 MLLT1Q03111 559 aaPredicted RBP11.79□□□□□ -0.52
SMG6-201ENST00000263073 HYAL2Q12891 473 aa11.79□□□□□ -0.52
SMG6-201ENST00000263073 LRRC37A5PQ49AS3 106 aa11.79□□□□□ -0.52
SMG6-201ENST00000263073 UBXN11Q5T124 520 aa11.79□□□□□ -0.52
SMG6-201ENST00000263073 DRICH1Q6PGQ1 229 aaPredicted RBP11.79□□□□□ -0.52
SMG6-201ENST00000263073 AQP12AQ8IXF9 295 aa11.79□□□□□ -0.52
SMG6-201ENST00000263073 AKAP1Q92667 903 aaKnown RBP eCLIP11.79□□□□□ -0.524e-7■■■■□ 26
SMG6-201ENST00000263073 PAK6Q9NQU5 681 aaPredicted RBP11.79□□□□□ -0.52
SMG6-201ENST00000263073 WDR37Q9Y2I8 494 aa11.79□□□□□ -0.52
SMG6-201ENST00000263073 LRRC42Q9Y546 428 aa11.79□□□□□ -0.52
SMG6-201ENST00000263073 A0A1W2PPK0 400 aa11.78□□□□□ -0.52
SMG6-201ENST00000263073 AGTR2P50052 363 aa11.78□□□□□ -0.52
SMG6-201ENST00000263073 CREMQ03060 361 aa11.78□□□□□ -0.52
SMG6-201ENST00000263073 FAM92BQ6ZTR7 304 aa11.78□□□□□ -0.52
SMG6-201ENST00000263073 GPR151Q8TDV0 419 aa11.78□□□□□ -0.52
SMG6-201ENST00000263073 RNF6Q9Y252 685 aa11.78□□□□□ -0.52
SMG6-201ENST00000263073 CMAHPQ9Y471 501 aa11.78□□□□□ -0.52
SMG6-201ENST00000263073 UPK3BL1B0FP48 263 aa11.78□□□□□ -0.52
SMG6-201ENST00000263073 UPK3BL2E5RIL1 263 aa11.78□□□□□ -0.52
SMG6-201ENST00000263073 TOXO94900 526 aa11.78□□□□□ -0.52
SMG6-201ENST00000263073 OAZ2O95190 189 aa11.78□□□□□ -0.52
SMG6-201ENST00000263073 EPHX1P07099 455 aa11.78□□□□□ -0.52
SMG6-201ENST00000263073 HK1P19367 917 aa11.78□□□□□ -0.52
SMG6-201ENST00000263073 ACADLP28330 430 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms