RNA–Protein interactions for RNA: ENST00000260595.9

CGREF1-201, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CGREF1, Length 1,177 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-201ENST00000260595 MIPEPQ99797 713 aa16.17■□□□□ 0.18
CGREF1-201ENST00000260595 SELENOSQ9BQE4 189 aa16.17■□□□□ 0.18
CGREF1-201ENST00000260595 TRIM56Q9BRZ2 755 aaKnown RBP16.17■□□□□ 0.18
CGREF1-201ENST00000260595 WDR54Q9H977 334 aa16.17■□□□□ 0.18
CGREF1-201ENST00000260595 SLAMF7Q9NQ25 335 aa16.17■□□□□ 0.18
CGREF1-201ENST00000260595 BLACEA4D250 179 aa16.16■□□□□ 0.18
CGREF1-201ENST00000260595 TCP11X1B4DZS4 312 aa16.16■□□□□ 0.18
CGREF1-201ENST00000260595 H3BMM5 538 aa16.16■□□□□ 0.18
CGREF1-201ENST00000260595 AGPSO00116 658 aa16.16■□□□□ 0.18
CGREF1-201ENST00000260595 SRPX2O60687 465 aaPredicted RBP16.16■□□□□ 0.18
CGREF1-201ENST00000260595 MED26O95402 600 aa16.16■□□□□ 0.18
CGREF1-201ENST00000260595 ESR1P03372 595 aa16.16■□□□□ 0.18
CGREF1-201ENST00000260595 ERGP11308 486 aa16.16■□□□□ 0.18
CGREF1-201ENST00000260595 OGNP20774 298 aaKnown RBP16.16■□□□□ 0.18
CGREF1-201ENST00000260595 ATP5DP30049 168 aa16.16■□□□□ 0.18
CGREF1-201ENST00000260595 YBX1P67809 324 aaKnown RBP16.16■□□□□ 0.18
CGREF1-201ENST00000260595 WASHC2DQ5SRD0 308 aa16.16■□□□□ 0.18
CGREF1-201ENST00000260595 RNF187Q5TA31 235 aaPredicted RBP16.16■□□□□ 0.18
CGREF1-201ENST00000260595 ANKRD22Q5VYY1 191 aa16.16■□□□□ 0.18
CGREF1-201ENST00000260595 ARMC3Q5W041 872 aa16.16■□□□□ 0.18
CGREF1-201ENST00000260595 FRMPD2BQ6IN97 320 aa16.16■□□□□ 0.18
CGREF1-201ENST00000260595 TTC27Q6P3X3 843 aa16.16■□□□□ 0.18
CGREF1-201ENST00000260595 DTWD1Q8N5C7 304 aa16.16■□□□□ 0.18
CGREF1-201ENST00000260595 OTUD6BQ8N6M0 293 aa16.16■□□□□ 0.18
CGREF1-201ENST00000260595 MAGEC3Q8TD91 643 aa16.16■□□□□ 0.18
CGREF1-201ENST00000260595 FAM136AQ96C01 138 aa16.16■□□□□ 0.18
CGREF1-201ENST00000260595 FOPNLQ96NB1 174 aa16.16■□□□□ 0.18
CGREF1-201ENST00000260595 ATP13A2Q9NQ11 1180 aa16.16■□□□□ 0.18
CGREF1-201ENST00000260595 SPATA7Q9P0W8 599 aa16.16■□□□□ 0.18
CGREF1-201ENST00000260595 CRYL1Q9Y2S2 319 aa16.16■□□□□ 0.18
CGREF1-201ENST00000260595 LRRK2Q5S007 2527 aa16.15■□□□□ 0.18
CGREF1-201ENST00000260595 LOC105369274A0A096LPK9 316 aa16.15■□□□□ 0.18
CGREF1-201ENST00000260595 LOC102723532A0A0G2JNH3 316 aa16.15■□□□□ 0.18
CGREF1-201ENST00000260595 VSTM2BA6NLU5 285 aa16.15■□□□□ 0.18
CGREF1-201ENST00000260595 SOCS6O14544 535 aa16.15■□□□□ 0.18
CGREF1-201ENST00000260595 PIM1P11309 404 aaPredicted RBP16.15■□□□□ 0.18
CGREF1-201ENST00000260595 OR1D4P47884 311 aa16.15■□□□□ 0.18
CGREF1-201ENST00000260595 VPS41P49754 854 aa16.15■□□□□ 0.18
CGREF1-201ENST00000260595 TERF1P54274 439 aa16.15■□□□□ 0.18
CGREF1-201ENST00000260595 VSX2P58304 361 aaPredicted RBP16.15■□□□□ 0.18
CGREF1-201ENST00000260595 GPS1Q13098 491 aa16.15■□□□□ 0.18
CGREF1-201ENST00000260595 FAM214AQ32MH5 1076 aa16.15■□□□□ 0.18
CGREF1-201ENST00000260595 ACSBG2Q5FVE4 666 aa16.15■□□□□ 0.18
CGREF1-201ENST00000260595 CRB2Q5IJ48 1285 aa16.15■□□□□ 0.18
CGREF1-201ENST00000260595 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.15■□□□□ 0.18
CGREF1-201ENST00000260595 FHL5Q5TD97 284 aa16.15■□□□□ 0.18
CGREF1-201ENST00000260595 NEPROQ6NW34 567 aa16.15■□□□□ 0.18
CGREF1-201ENST00000260595 FBXO42Q6P3S6 717 aa16.15■□□□□ 0.18
CGREF1-201ENST00000260595 RNF44Q7L0R7 432 aa16.15■□□□□ 0.18
CGREF1-201ENST00000260595 CILP2Q8IUL8 1156 aa16.15■□□□□ 0.18
CGREF1-201ENST00000260595 OR4N4Q8N0Y3 316 aa16.15■□□□□ 0.18
CGREF1-201ENST00000260595 RASGEF1CQ8N431 466 aa16.15■□□□□ 0.18
CGREF1-201ENST00000260595 RAB42Q8N4Z0 105 aa16.15■□□□□ 0.18
CGREF1-201ENST00000260595 TTC29Q8NA56 475 aaPredicted RBP16.15■□□□□ 0.18
CGREF1-201ENST00000260595 C19orf60Q96EN9 201 aa16.15■□□□□ 0.18
CGREF1-201ENST00000260595 ZBTB20Q9HC78 741 aaPredicted RBP16.15■□□□□ 0.18
CGREF1-201ENST00000260595 SLC6A20Q9NP91 592 aa16.15■□□□□ 0.18
CGREF1-201ENST00000260595 CTSFQ9UBX1 484 aa16.15■□□□□ 0.18
CGREF1-201ENST00000260595 B3GNT3Q9Y2A9 372 aa16.15■□□□□ 0.18
CGREF1-201ENST00000260595 NEU2Q9Y3R4 380 aa16.15■□□□□ 0.18
CGREF1-201ENST00000260595 HS3ST3B1Q9Y662 390 aa16.15■□□□□ 0.18
CGREF1-201ENST00000260595 MAST4O15021 2626 aa16.15■□□□□ 0.18
CGREF1-201ENST00000260595 SHANK1Q9Y566 2161 aa16.14■□□□□ 0.17
CGREF1-201ENST00000260595 CCDC88CQ9P219 2028 aa16.14■□□□□ 0.17
CGREF1-201ENST00000260595 A0A0J9YVX5 310 aa16.14■□□□□ 0.17
CGREF1-201ENST00000260595 HYKKA2RU49 373 aa16.14■□□□□ 0.17
CGREF1-201ENST00000260595 OR2A25A4D2G3 310 aa16.14■□□□□ 0.17
CGREF1-201ENST00000260595 ARHGEF33A8MVX0 844 aa16.14■□□□□ 0.17
CGREF1-201ENST00000260595 PSIP1O75475 530 aaKnown RBP16.14■□□□□ 0.17
CGREF1-201ENST00000260595 KRT14P02533 472 aa16.14■□□□□ 0.17
CGREF1-201ENST00000260595 ALPPP05187 535 aa16.14■□□□□ 0.17
CGREF1-201ENST00000260595 PKMP14618 531 aaKnown RBP16.14■□□□□ 0.17
CGREF1-201ENST00000260595 CHRM3P20309 590 aa16.14■□□□□ 0.17
CGREF1-201ENST00000260595 VARSP26640 1264 aaKnown RBP16.14■□□□□ 0.17
CGREF1-201ENST00000260595 AIMP2Q13155 320 aaKnown RBP16.14■□□□□ 0.17
CGREF1-201ENST00000260595 KIRREL2Q6UWL6 708 aa16.14■□□□□ 0.17
CGREF1-201ENST00000260595 SPNS2Q8IVW8 549 aa16.14■□□□□ 0.17
CGREF1-201ENST00000260595 METTL27Q8N6F8 245 aaPredicted RBP16.14■□□□□ 0.17
CGREF1-201ENST00000260595 OR9A1PQ8NGU1 263 aa16.14■□□□□ 0.17
CGREF1-201ENST00000260595 INPP5DQ92835 1189 aa16.14■□□□□ 0.17
CGREF1-201ENST00000260595 SNRNP40Q96DI7 357 aaKnown RBP16.14■□□□□ 0.17
CGREF1-201ENST00000260595 SLC30A3Q99726 388 aa16.14■□□□□ 0.17
CGREF1-201ENST00000260595 IL1RAPL1Q9NZN1 696 aa16.14■□□□□ 0.17
CGREF1-201ENST00000260595 TSR3Q9UJK0 312 aaKnown RBP16.14■□□□□ 0.17
CGREF1-201ENST00000260595 FBXL4Q9UKA2 621 aa16.14■□□□□ 0.17
CGREF1-201ENST00000260595 PPP2R2CQ9Y2T4 447 aa16.14■□□□□ 0.17
CGREF1-201ENST00000260595 MED16Q9Y2X0 877 aa16.14■□□□□ 0.17
CGREF1-201ENST00000260595 USP9XQ93008 2570 aaPredicted RBP16.13■□□□□ 0.17
CGREF1-201ENST00000260595 ZCWPW2A0A1B0GU75 182 aa16.13■□□□□ 0.17
CGREF1-201ENST00000260595 FAM237BA0A1B0GVD1 139 aa16.13■□□□□ 0.17
CGREF1-201ENST00000260595 MYO1CO00159 1063 aa16.13■□□□□ 0.17
CGREF1-201ENST00000260595 PFDN6O15212 129 aa16.13■□□□□ 0.17
CGREF1-201ENST00000260595 KLHL41O60662 606 aa16.13■□□□□ 0.17
CGREF1-201ENST00000260595 SEMA7AO75326 666 aa16.13■□□□□ 0.17
CGREF1-201ENST00000260595 IPO13O94829 963 aaKnown RBP16.13■□□□□ 0.17
CGREF1-201ENST00000260595 F7P08709 466 aaPredicted RBP16.13■□□□□ 0.17
CGREF1-201ENST00000260595 MLNP12872 115 aa16.13■□□□□ 0.17
CGREF1-201ENST00000260595 CLCN7P51798 805 aa16.13■□□□□ 0.17
CGREF1-201ENST00000260595 SARNPP82979 210 aaKnown RBP16.13■□□□□ 0.17
CGREF1-201ENST00000260595 MRPL49Q13405 166 aaKnown RBP16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms