RNA–Protein interactions for RNA: ENST00000253754.7

PDLIM4-201, Transcript of PDZ and LIM domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM4, Length 2,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-201ENST00000253754 CLOCKO15516 846 aa18.17■□□□□ 0.5
PDLIM4-201ENST00000253754 C1QCP02747 245 aa18.17■□□□□ 0.5
PDLIM4-201ENST00000253754 CYP17A1P05093 508 aa18.17■□□□□ 0.5
PDLIM4-201ENST00000253754 CD22P20273 847 aa18.17■□□□□ 0.5
PDLIM4-201ENST00000253754 MYF6P23409 242 aa18.17■□□□□ 0.5
PDLIM4-201ENST00000253754 RPS9P46781 194 aaKnown RBP18.17■□□□□ 0.5
PDLIM4-201ENST00000253754 CLCN2P51788 898 aa18.17■□□□□ 0.5
PDLIM4-201ENST00000253754 CHIT1Q13231 466 aa18.17■□□□□ 0.5
PDLIM4-201ENST00000253754 PGS1Q32NB8 556 aa18.17■□□□□ 0.5
PDLIM4-201ENST00000253754 GGTA1PQ4G0N0 100 aa18.17■□□□□ 0.5
PDLIM4-201ENST00000253754 RUNDC3AQ59EK9 446 aa18.17■□□□□ 0.5
PDLIM4-201ENST00000253754 SYCE2Q6PIF2 218 aa18.17■□□□□ 0.5
PDLIM4-201ENST00000253754 CYP2U1Q7Z449 544 aa18.17■□□□□ 0.5
PDLIM4-201ENST00000253754 KIAA0907Q7Z7F0 614 aaPredicted RBP18.17■□□□□ 0.5
PDLIM4-201ENST00000253754 ZNF557Q8N988 423 aaPredicted RBP18.17■□□□□ 0.5
PDLIM4-201ENST00000253754 RASGEF1AQ8N9B8 481 aa18.17■□□□□ 0.5
PDLIM4-201ENST00000253754 L3MBTL4Q8NA19 623 aa18.17■□□□□ 0.5
PDLIM4-201ENST00000253754 MCOLN3Q8TDD5 553 aa18.17■□□□□ 0.5
PDLIM4-201ENST00000253754 PAIP1Q9H074 479 aaKnown RBP18.17■□□□□ 0.5
PDLIM4-201ENST00000253754 SERHLQ9NQF3 203 aa18.17■□□□□ 0.5
PDLIM4-201ENST00000253754 PADI4Q9UM07 663 aa18.17■□□□□ 0.5
PDLIM4-201ENST00000253754 COMMD3-BMI1R4GMX3 469 aa18.17■□□□□ 0.5
PDLIM4-201ENST00000253754 H3BSA7 217 aa18.16■□□□□ 0.5
PDLIM4-201ENST00000253754 XPAP23025 273 aaPredicted RBP18.16■□□□□ 0.5
PDLIM4-201ENST00000253754 CDKN2CP42773 168 aa18.16■□□□□ 0.5
PDLIM4-201ENST00000253754 SP140Q13342 867 aa18.16■□□□□ 0.5
PDLIM4-201ENST00000253754 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.16■□□□□ 0.5
PDLIM4-201ENST00000253754 RAVER1Q8IY67 606 aaKnown RBP18.16■□□□□ 0.5
PDLIM4-201ENST00000253754 TRIML2Q8N7C3 387 aa18.16■□□□□ 0.5
PDLIM4-201ENST00000253754 DDHD1Q8NEL9 900 aa18.16■□□□□ 0.5
PDLIM4-201ENST00000253754 ASZ1Q8WWH4 475 aa18.16■□□□□ 0.5
PDLIM4-201ENST00000253754 CCDC115Q96NT0 180 aa18.16■□□□□ 0.5
PDLIM4-201ENST00000253754 WRAP53Q9BUR4 548 aaKnown RBP18.16■□□□□ 0.5
PDLIM4-201ENST00000253754 SMPD3Q9NY59 655 aaPredicted RBP18.16■□□□□ 0.5
PDLIM4-201ENST00000253754 LIMD1Q9UGP4 676 aa18.16■□□□□ 0.5
PDLIM4-201ENST00000253754 ADGRE2Q9UHX3 823 aa18.16■□□□□ 0.5
PDLIM4-201ENST00000253754 INVSQ9Y283 1065 aa18.16■□□□□ 0.5
PDLIM4-201ENST00000253754 TRBV5-3A0A0A0MS03 114 aa18.16■□□□□ 0.5
PDLIM4-201ENST00000253754 C16orf96A6NNT2 1141 aa18.16■□□□□ 0.5
PDLIM4-201ENST00000253754 ADH5P11766 374 aa18.16■□□□□ 0.5
PDLIM4-201ENST00000253754 PBLDP30039 288 aaPredicted RBP18.16■□□□□ 0.5
PDLIM4-201ENST00000253754 IST1P53990 364 aa18.16■□□□□ 0.5
PDLIM4-201ENST00000253754 CLDN8P56748 225 aa18.16■□□□□ 0.5
PDLIM4-201ENST00000253754 DCDC1P59894 354 aa18.16■□□□□ 0.5
PDLIM4-201ENST00000253754 SF1Q15637 639 aaKnown RBP18.16■□□□□ 0.5
PDLIM4-201ENST00000253754 CYBRD1Q53TN4 286 aa18.16■□□□□ 0.5
PDLIM4-201ENST00000253754 TRAM1L1Q8N609 369 aa18.16■□□□□ 0.5
PDLIM4-201ENST00000253754 CLK4Q9HAZ1 481 aaKnown RBP18.16■□□□□ 0.5
PDLIM4-201ENST00000253754 GPRC5BQ9NZH0 403 aa18.16■□□□□ 0.5
PDLIM4-201ENST00000253754 ZNF639Q9UID6 485 aa18.16■□□□□ 0.5
PDLIM4-201ENST00000253754 FADS3Q9Y5Q0 445 aa18.16■□□□□ 0.5
PDLIM4-201ENST00000253754 DOCK8Q8NF50 2099 aa18.16■□□□□ 0.5
PDLIM4-201ENST00000253754 A0A0C4DFX4 3053 aa18.15■□□□□ 0.5
PDLIM4-201ENST00000253754 TRIOO75962 3097 aa18.15■□□□□ 0.5
PDLIM4-201ENST00000253754 HEPACAM2A8MVW5 462 aa18.15■□□□□ 0.5
PDLIM4-201ENST00000253754 RAP2AP10114 183 aa18.15■□□□□ 0.5
PDLIM4-201ENST00000253754 NNMTP40261 264 aa18.15■□□□□ 0.5
PDLIM4-201ENST00000253754 BDKRB1P46663 353 aa18.15■□□□□ 0.5
PDLIM4-201ENST00000253754 LAPTM5Q13571 262 aa18.15■□□□□ 0.5
PDLIM4-201ENST00000253754 ZNF805Q5CZA5 627 aa18.15■□□□□ 0.5
PDLIM4-201ENST00000253754 FRG2Q64ET8 278 aa18.15■□□□□ 0.5
PDLIM4-201ENST00000253754 ADNP2Q6IQ32 1131 aa18.15■□□□□ 0.5
PDLIM4-201ENST00000253754 TTC33Q6PID6 262 aaPredicted RBP18.15■□□□□ 0.5
PDLIM4-201ENST00000253754 PARS2Q7L3T8 475 aaKnown RBP18.15■□□□□ 0.5
PDLIM4-201ENST00000253754 PLPP6Q8IY26 295 aa18.15■□□□□ 0.5
PDLIM4-201ENST00000253754 ZFAND2BQ8WV99 257 aa18.15■□□□□ 0.5
PDLIM4-201ENST00000253754 TMBIM1Q969X1 311 aa18.15■□□□□ 0.5
PDLIM4-201ENST00000253754 ERLEC1Q96DZ1 483 aa18.15■□□□□ 0.5
PDLIM4-201ENST00000253754 MED8Q96G25 268 aa18.15■□□□□ 0.5
PDLIM4-201ENST00000253754 FRG2BQ96QU4 278 aa18.15■□□□□ 0.5
PDLIM4-201ENST00000253754 GDE1Q9NZC3 331 aa18.15■□□□□ 0.5
PDLIM4-201ENST00000253754 COLQQ9Y215 455 aaPredicted RBP18.15■□□□□ 0.5
PDLIM4-201ENST00000253754 COQ6Q9Y2Z9 468 aa18.15■□□□□ 0.5
PDLIM4-201ENST00000253754 TSPAN11A1L157 253 aa18.15■□□□□ 0.5
PDLIM4-201ENST00000253754 ELOVL7A1L3X0 281 aa18.15■□□□□ 0.5
PDLIM4-201ENST00000253754 E7EQ34 232 aa18.15■□□□□ 0.5
PDLIM4-201ENST00000253754 SLC16A5O15375 505 aa18.15■□□□□ 0.5
PDLIM4-201ENST00000253754 SLCO2B1O94956 709 aa18.15■□□□□ 0.5
PDLIM4-201ENST00000253754 ADH1CP00326 375 aa18.15■□□□□ 0.5
PDLIM4-201ENST00000253754 S100A3P33764 101 aa18.15■□□□□ 0.5
PDLIM4-201ENST00000253754 DDX39BQ13838 428 aaKnown RBP18.15■□□□□ 0.5
PDLIM4-201ENST00000253754 ACOX1Q15067 660 aa18.15■□□□□ 0.5
PDLIM4-201ENST00000253754 ZNF284Q2VY69 593 aa18.15■□□□□ 0.5
PDLIM4-201ENST00000253754 ZIK1Q3SY52 487 aaPredicted RBP18.15■□□□□ 0.5
PDLIM4-201ENST00000253754 SYTL3Q4VX76 610 aa18.15■□□□□ 0.5
PDLIM4-201ENST00000253754 FAM98BQ52LJ0 330 aaKnown RBP18.15■□□□□ 0.5
PDLIM4-201ENST00000253754 ANKRD54Q6NXT1 300 aa18.15■□□□□ 0.5
PDLIM4-201ENST00000253754 TMEM184AQ6ZMB5 413 aa18.15■□□□□ 0.5
PDLIM4-201ENST00000253754 TECPR1Q7Z6L1 1165 aa18.15■□□□□ 0.5
PDLIM4-201ENST00000253754 BTN2A2Q8WVV5 523 aa18.15■□□□□ 0.5
PDLIM4-201ENST00000253754 HAUS8Q9BT25 410 aa18.15■□□□□ 0.5
PDLIM4-201ENST00000253754 ZSCAN5AQ9BUG6 496 aa18.15■□□□□ 0.5
PDLIM4-201ENST00000253754 BDH2Q9BUT1 245 aa18.15■□□□□ 0.5
PDLIM4-201ENST00000253754 KAT8Q9H7Z6 458 aaKnown RBP18.15■□□□□ 0.5
PDLIM4-201ENST00000253754 OTOL1A6NHN0 477 aaPredicted RBP18.14■□□□□ 0.49
PDLIM4-201ENST00000253754 CXCR6O00574 342 aa18.14■□□□□ 0.49
PDLIM4-201ENST00000253754 SH3BGRLO75368 114 aa18.14■□□□□ 0.49
PDLIM4-201ENST00000253754 TULP3O75386 442 aa18.14■□□□□ 0.49
PDLIM4-201ENST00000253754 GMNNO75496 209 aa18.14■□□□□ 0.49
PDLIM4-201ENST00000253754 FTH1P02794 183 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms