RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 DCAF4L2Q8NA75 395 aa16.56■□□□□ 0.24
FOXA1-201ENST00000250448 OR10A6Q8NH74 314 aa16.56■□□□□ 0.24
FOXA1-201ENST00000250448 SLC13A3Q8WWT9 602 aa16.56■□□□□ 0.24
FOXA1-201ENST00000250448 FAM162AQ96A26 154 aa16.56■□□□□ 0.24
FOXA1-201ENST00000250448 ZFYVE19Q96K21 471 aa16.56■□□□□ 0.24
FOXA1-201ENST00000250448 RETREG1Q9H6L5 497 aa16.56■□□□□ 0.24
FOXA1-201ENST00000250448 SLC28A3Q9HAS3 691 aa16.56■□□□□ 0.24
FOXA1-201ENST00000250448 GIN1Q9NXP7 522 aa16.56■□□□□ 0.24
FOXA1-201ENST00000250448 NUDT4Q9NZJ9 180 aa16.56■□□□□ 0.24
FOXA1-201ENST00000250448 VPS9D1Q9Y2B5 631 aa16.56■□□□□ 0.24
FOXA1-201ENST00000250448 LOC100130705A0A1B0GUX0 176 aa16.55■□□□□ 0.24
FOXA1-201ENST00000250448 ZNF99A8MXY4 864 aaPredicted RBP16.55■□□□□ 0.24
FOXA1-201ENST00000250448 E2F6O75461 281 aa16.55■□□□□ 0.24
FOXA1-201ENST00000250448 CD300CQ08708 224 aa16.55■□□□□ 0.24
FOXA1-201ENST00000250448 KIAA0040Q15053 153 aa16.55■□□□□ 0.24
FOXA1-201ENST00000250448 TAF1AQ15573 450 aaPredicted RBP16.55■□□□□ 0.24
FOXA1-201ENST00000250448 ZNF77Q15935 545 aa16.55■□□□□ 0.24
FOXA1-201ENST00000250448 ALG1LQ6GMV1 187 aa16.55■□□□□ 0.24
FOXA1-201ENST00000250448 PSAPL1Q6NUJ1 521 aa16.55■□□□□ 0.24
FOXA1-201ENST00000250448 SLCO6A1Q86UG4 719 aa16.55■□□□□ 0.24
FOXA1-201ENST00000250448 PIANPQ8IYJ0 282 aa16.55■□□□□ 0.24
FOXA1-201ENST00000250448 EFHBQ8N7U6 833 aa16.55■□□□□ 0.24
FOXA1-201ENST00000250448 THUMPD3Q9BV44 507 aaKnown RBP16.55■□□□□ 0.24
FOXA1-201ENST00000250448 CCDC90BQ9GZT6 254 aa16.55■□□□□ 0.24
FOXA1-201ENST00000250448 C3orf18Q9UK00 162 aa16.55■□□□□ 0.24
FOXA1-201ENST00000250448 PTGES3LE9PB15 166 aa16.55■□□□□ 0.24
FOXA1-201ENST00000250448 LINC01565O15544 149 aa16.55■□□□□ 0.24
FOXA1-201ENST00000250448 OR1I1O60431 355 aa16.55■□□□□ 0.24
FOXA1-201ENST00000250448 MDGA1Q8NFP4 955 aa16.55■□□□□ 0.24
FOXA1-201ENST00000250448 OR5K1Q8NHB7 308 aa16.55■□□□□ 0.24
FOXA1-201ENST00000250448 FIBINQ8TAL6 211 aa16.55■□□□□ 0.24
FOXA1-201ENST00000250448 CLIP3Q96DZ5 547 aa16.55■□□□□ 0.24
FOXA1-201ENST00000250448 ZNF641Q96N77 438 aaPredicted RBP16.55■□□□□ 0.24
FOXA1-201ENST00000250448 ZBTB18Q99592 522 aa16.55■□□□□ 0.24
FOXA1-201ENST00000250448 C2orf49Q9BVC5 232 aaPredicted RBP16.55■□□□□ 0.24
FOXA1-201ENST00000250448 EXD2Q9NVH0 621 aa16.55■□□□□ 0.24
FOXA1-201ENST00000250448 C2orf16Q68DN1 1984 aa16.55■□□□□ 0.24
FOXA1-201ENST00000250448 TMEM247A6NEH6 219 aa16.54■□□□□ 0.24
FOXA1-201ENST00000250448 CXCR6O00574 342 aa16.54■□□□□ 0.24
FOXA1-201ENST00000250448 PRKD3O94806 890 aa16.54■□□□□ 0.24
FOXA1-201ENST00000250448 GABARAPO95166 117 aa16.54■□□□□ 0.24
FOXA1-201ENST00000250448 TYRP14679 529 aa16.54■□□□□ 0.24
FOXA1-201ENST00000250448 MSH3P20585 1137 aa16.54■□□□□ 0.24
FOXA1-201ENST00000250448 PPP1R8Q12972 351 aaKnown RBP16.54■□□□□ 0.24
FOXA1-201ENST00000250448 RFTN2Q52LD8 501 aaPredicted RBP16.54■□□□□ 0.24
FOXA1-201ENST00000250448 TCEAL5Q5H9L2 206 aa16.54■□□□□ 0.24
FOXA1-201ENST00000250448 GOLGA7Q7Z5G4 137 aa16.54■□□□□ 0.24
FOXA1-201ENST00000250448 EID3Q8N140 333 aa16.54■□□□□ 0.24
FOXA1-201ENST00000250448 PIK3C3Q8NEB9 887 aa16.54■□□□□ 0.24
FOXA1-201ENST00000250448 OR4F6Q8NGB9 312 aa16.54■□□□□ 0.24
FOXA1-201ENST00000250448 S100ZQ8WXG8 99 aa16.54■□□□□ 0.24
FOXA1-201ENST00000250448 SLC35B4Q969S0 331 aa16.54■□□□□ 0.24
FOXA1-201ENST00000250448 IKZF5Q9H5V7 419 aa16.54■□□□□ 0.24
FOXA1-201ENST00000250448 ELOVL7A1L3X0 281 aa16.54■□□□□ 0.24
FOXA1-201ENST00000250448 CNOT3O75175 753 aaKnown RBP16.54■□□□□ 0.24
FOXA1-201ENST00000250448 JRKO75564 520 aa16.54■□□□□ 0.24
FOXA1-201ENST00000250448 SCELO95171 688 aa16.54■□□□□ 0.24
FOXA1-201ENST00000250448 DCTP40126 519 aa16.54■□□□□ 0.24
FOXA1-201ENST00000250448 DUSP6Q16828 381 aa16.54■□□□□ 0.24
FOXA1-201ENST00000250448 C18orf21Q32NC0 220 aaPredicted RBP16.54■□□□□ 0.24
FOXA1-201ENST00000250448 ZNF783Q6ZMS7 281 aa16.54■□□□□ 0.24
FOXA1-201ENST00000250448 TMEM179BQ7Z7N9 219 aa16.54■□□□□ 0.24
FOXA1-201ENST00000250448 ADHFE1Q8IWW8 467 aa16.54■□□□□ 0.24
FOXA1-201ENST00000250448 MINDY2Q8NBR6 621 aa16.54■□□□□ 0.24
FOXA1-201ENST00000250448 FAR1Q8WVX9 515 aa16.54■□□□□ 0.24
FOXA1-201ENST00000250448 SORCS1Q8WY21 1168 aa16.54■□□□□ 0.24
FOXA1-201ENST00000250448 IRF7Q92985 503 aa16.54■□□□□ 0.24
FOXA1-201ENST00000250448 VMP1Q96GC9 406 aa16.54■□□□□ 0.24
FOXA1-201ENST00000250448 BCL7BQ9BQE9 202 aa16.54■□□□□ 0.24
FOXA1-201ENST00000250448 SARS2Q9NP81 518 aaKnown RBP16.54■□□□□ 0.24
FOXA1-201ENST00000250448 KIAA1522Q9P206 1035 aaPredicted RBP16.54■□□□□ 0.24
FOXA1-201ENST00000250448 PCDHB9Q9Y5E1 797 aa16.54■□□□□ 0.24
FOXA1-201ENST00000250448 OR7A17O14581 309 aa16.53■□□□□ 0.24
FOXA1-201ENST00000250448 TOR1BO14657 336 aa16.53■□□□□ 0.24
FOXA1-201ENST00000250448 FGF19O95750 216 aa16.53■□□□□ 0.24
FOXA1-201ENST00000250448 CCDC159P0C7I6 412 aa16.53■□□□□ 0.24
FOXA1-201ENST00000250448 MYCLP1P12525 358 aaPredicted RBP16.53■□□□□ 0.24
FOXA1-201ENST00000250448 CTPS1P17812 591 aa16.53■□□□□ 0.24
FOXA1-201ENST00000250448 CD9P21926 228 aa16.53■□□□□ 0.24
FOXA1-201ENST00000250448 TMED10P49755 219 aaKnown RBP16.53■□□□□ 0.24
FOXA1-201ENST00000250448 RPL38P63173 70 aaKnown RBP16.53■□□□□ 0.24
FOXA1-201ENST00000250448 SEMG2Q02383 582 aa16.53■□□□□ 0.24
FOXA1-201ENST00000250448 ABRAXAS2Q15018 415 aa16.53■□□□□ 0.24
FOXA1-201ENST00000250448 OR7A2PQ8NGA2 310 aa16.53■□□□□ 0.24
FOXA1-201ENST00000250448 ZFP90Q8TF47 636 aa16.53■□□□□ 0.24
FOXA1-201ENST00000250448 GTF2H4Q92759 462 aa16.53■□□□□ 0.24
FOXA1-201ENST00000250448 SAMD11Q96NU1 681 aa16.53■□□□□ 0.24
FOXA1-201ENST00000250448 SPHK2Q9NRA0 654 aa16.53■□□□□ 0.24
FOXA1-201ENST00000250448 FKBPLQ9UIM3 349 aa16.53■□□□□ 0.24
FOXA1-201ENST00000250448 MSRAQ9UJ68 235 aa16.53■□□□□ 0.24
FOXA1-201ENST00000250448 C2orf81A6NN90 581 aa16.53■□□□□ 0.24
FOXA1-201ENST00000250448 DDX6P26196 483 aaKnown RBP eCLIP16.53■□□□□ 0.242e-7■■■■□ 21.7
FOXA1-201ENST00000250448 AKT1P31749 480 aa16.53■□□□□ 0.24
FOXA1-201ENST00000250448 MC4RP32245 332 aa16.53■□□□□ 0.24
FOXA1-201ENST00000250448 TTPAP49638 278 aa16.53■□□□□ 0.24
FOXA1-201ENST00000250448 IL18R1Q13478 541 aa16.53■□□□□ 0.24
FOXA1-201ENST00000250448 DGKKQ5KSL6 1271 aa16.53■□□□□ 0.24
FOXA1-201ENST00000250448 LINC00299Q6ZSB3 139 aa16.53■□□□□ 0.24
FOXA1-201ENST00000250448 ADGRG2Q8IZP9 1017 aa16.53■□□□□ 0.24
FOXA1-201ENST00000250448 FRS2Q8WU20 508 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms