RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 GMNNO75496 209 aa21.04■□□□□ 0.96
CLN6-201ENST00000249806 SLC16A8O95907 504 aa21.04■□□□□ 0.96
CLN6-201ENST00000249806 ZNF23P17027 643 aa21.04■□□□□ 0.96
CLN6-201ENST00000249806 CDKN2CP42773 168 aa21.04■□□□□ 0.96
CLN6-201ENST00000249806 CLCN2P51788 898 aa21.04■□□□□ 0.96
CLN6-201ENST00000249806 DDX39BQ13838 428 aaKnown RBP21.04■□□□□ 0.96
CLN6-201ENST00000249806 SF1Q15637 639 aaKnown RBP21.04■□□□□ 0.96
CLN6-201ENST00000249806 NOXRED1Q6NXP6 359 aa21.04■□□□□ 0.96
CLN6-201ENST00000249806 ENPP6Q6UWR7 440 aa21.04■□□□□ 0.96
CLN6-201ENST00000249806 HOMEZQ8IX15 550 aa21.04■□□□□ 0.96
CLN6-201ENST00000249806 FBXO30Q8TB52 745 aa21.04■□□□□ 0.96
CLN6-201ENST00000249806 OR4K3Q96R72 315 aa21.04■□□□□ 0.96
CLN6-201ENST00000249806 FAM83CQ9BQN1 747 aa21.04■□□□□ 0.96
CLN6-201ENST00000249806 GORASP2Q9H8Y8 452 aa21.04■□□□□ 0.96
CLN6-201ENST00000249806 PNPLA3Q9NST1 481 aa21.04■□□□□ 0.96
CLN6-201ENST00000249806 STOX2Q9P2F5 926 aaPredicted RBP21.04■□□□□ 0.96
CLN6-201ENST00000249806 ADGRE2Q9UHX3 823 aa21.04■□□□□ 0.96
CLN6-201ENST00000249806 SLC27A6Q9Y2P4 619 aa21.04■□□□□ 0.96
CLN6-201ENST00000249806 GRXCR1A8MXD5 290 aa21.04■□□□□ 0.96
CLN6-201ENST00000249806 H3BNH8 94 aa21.04■□□□□ 0.96
CLN6-201ENST00000249806 QSOX1O00391 747 aa21.04■□□□□ 0.96
CLN6-201ENST00000249806 VASPP50552 380 aaPredicted RBP21.04■□□□□ 0.96
CLN6-201ENST00000249806 DOC2AQ14183 400 aa21.04■□□□□ 0.96
CLN6-201ENST00000249806 TMEM214Q6NUQ4 689 aaKnown RBP21.04■□□□□ 0.96
CLN6-201ENST00000249806 ETFBKMTQ8IXQ9 262 aa21.04■□□□□ 0.96
CLN6-201ENST00000249806 TSPAN14Q8NG11 270 aa21.04■□□□□ 0.96
CLN6-201ENST00000249806 WFIKKN2Q8TEU8 576 aa21.04■□□□□ 0.96
CLN6-201ENST00000249806 CCDC115Q96NT0 180 aa21.04■□□□□ 0.96
CLN6-201ENST00000249806 BDH2Q9BUT1 245 aa21.04■□□□□ 0.96
CLN6-201ENST00000249806 KAT8Q9H7Z6 458 aaKnown RBP21.04■□□□□ 0.96
CLN6-201ENST00000249806 GPRC5BQ9NZH0 403 aa21.04■□□□□ 0.96
CLN6-201ENST00000249806 ELOVL7A1L3X0 281 aa21.03■□□□□ 0.96
CLN6-201ENST00000249806 ANTXRLA6NF34 631 aa21.03■□□□□ 0.96
CLN6-201ENST00000249806 CLOCKO15516 846 aa21.03■□□□□ 0.96
CLN6-201ENST00000249806 AHCYL1O43865 530 aa21.03■□□□□ 0.96
CLN6-201ENST00000249806 SOD1P00441 154 aa21.03■□□□□ 0.96
CLN6-201ENST00000249806 KCNC3Q14003 757 aa21.03■□□□□ 0.96
CLN6-201ENST00000249806 NKG7Q16617 165 aa21.03■□□□□ 0.96
CLN6-201ENST00000249806 SLC36A3Q495N2 470 aa21.03■□□□□ 0.96
CLN6-201ENST00000249806 FAM98BQ52LJ0 330 aaKnown RBP21.03■□□□□ 0.96
CLN6-201ENST00000249806 FNDC3BQ53EP0 1204 aaKnown RBP21.03■□□□□ 0.96
CLN6-201ENST00000249806 FAM78AQ5JUQ0 283 aa21.03■□□□□ 0.96
CLN6-201ENST00000249806 C9orf64Q5T6V5 341 aa21.03■□□□□ 0.96
CLN6-201ENST00000249806 LIPJQ5W064 366 aa21.03■□□□□ 0.96
CLN6-201ENST00000249806 ADNP2Q6IQ32 1131 aa21.03■□□□□ 0.96
CLN6-201ENST00000249806 RBM44Q6ZP01 1051 aaKnown RBP21.03■□□□□ 0.96
CLN6-201ENST00000249806 SPDYE1Q8NFV5 336 aaPredicted RBP21.03■□□□□ 0.96
CLN6-201ENST00000249806 CYGBQ8WWM9 190 aa21.03■□□□□ 0.96
CLN6-201ENST00000249806 ARRDC3Q96B67 414 aa21.03■□□□□ 0.96
CLN6-201ENST00000249806 DTD2Q96FN9 168 aa21.03■□□□□ 0.96
CLN6-201ENST00000249806 COQ10AQ96MF6 247 aa21.03■□□□□ 0.96
CLN6-201ENST00000249806 PKP4Q99569 1192 aa21.03■□□□□ 0.96
CLN6-201ENST00000249806 KCNH6Q9H252 994 aa21.03■□□□□ 0.96
CLN6-201ENST00000249806 SOX17Q9H6I2 414 aaPredicted RBP21.03■□□□□ 0.96
CLN6-201ENST00000249806 LIMD1Q9UGP4 676 aa21.03■□□□□ 0.96
CLN6-201ENST00000249806 UTS2RQ9UKP6 389 aa21.03■□□□□ 0.96
CLN6-201ENST00000249806 MYRFQ9Y2G1 1151 aa21.03■□□□□ 0.96
CLN6-201ENST00000249806 RWDD3Q9Y3V2 267 aa21.03■□□□□ 0.96
CLN6-201ENST00000249806 UPK1AO00322 258 aa21.02■□□□□ 0.96
CLN6-201ENST00000249806 NPC1O15118 1278 aa21.02■□□□□ 0.96
CLN6-201ENST00000249806 RAP2AP10114 183 aa21.02■□□□□ 0.96
CLN6-201ENST00000249806 OTUD3Q5T2D3 398 aaPredicted RBP21.02■□□□□ 0.96
CLN6-201ENST00000249806 NAIF1Q69YI7 327 aaPredicted RBP21.02■□□□□ 0.96
CLN6-201ENST00000249806 AADATQ8N5Z0 425 aa21.02■□□□□ 0.96
CLN6-201ENST00000249806 WDR20Q8TBZ3 569 aa21.02■□□□□ 0.96
CLN6-201ENST00000249806 GLMNQ92990 594 aa21.02■□□□□ 0.96
CLN6-201ENST00000249806 FBXL20Q96IG2 436 aa21.02■□□□□ 0.96
CLN6-201ENST00000249806 CCDC138Q96M89 665 aa21.02■□□□□ 0.96
CLN6-201ENST00000249806 SH3GL1Q99961 368 aa21.02■□□□□ 0.96
CLN6-201ENST00000249806 EPB41L1Q9H4G0 881 aa21.02■□□□□ 0.96
CLN6-201ENST00000249806 ZDHHC4Q9NPG8 344 aa21.02■□□□□ 0.96
CLN6-201ENST00000249806 TMED5Q9Y3A6 229 aa21.02■□□□□ 0.96
CLN6-201ENST00000249806 SH3BGRLO75368 114 aa21.02■□□□□ 0.96
CLN6-201ENST00000249806 ERN1O75460 977 aaKnown RBP21.02■□□□□ 0.96
CLN6-201ENST00000249806 SEC24DO94855 1032 aaPredicted RBP21.02■□□□□ 0.96
CLN6-201ENST00000249806 C1QCP02747 245 aa21.02■□□□□ 0.96
CLN6-201ENST00000249806 PRNPP04156 253 aa21.02■□□□□ 0.96
CLN6-201ENST00000249806 IMPA1P29218 277 aa21.02■□□□□ 0.96
CLN6-201ENST00000249806 PTPN6P29350 595 aa21.02■□□□□ 0.96
CLN6-201ENST00000249806 RPS9P46781 194 aaKnown RBP21.02■□□□□ 0.96
CLN6-201ENST00000249806 CHRNB3Q05901 458 aa21.02■□□□□ 0.96
CLN6-201ENST00000249806 LRIF1Q5T3J3 769 aa21.02■□□□□ 0.96
CLN6-201ENST00000249806 OR4F3Q6IEY1 312 aa21.02■□□□□ 0.96
CLN6-201ENST00000249806 SLC30A9Q6PML9 568 aa21.02■□□□□ 0.96
CLN6-201ENST00000249806 NRSN1Q8IZ57 195 aa21.02■□□□□ 0.96
CLN6-201ENST00000249806 TESCQ96BS2 214 aa21.02■□□□□ 0.96
CLN6-201ENST00000249806 RMND5BQ96G75 393 aaPredicted RBP21.02■□□□□ 0.96
CLN6-201ENST00000249806 ZNF639Q9UID6 485 aa21.02■□□□□ 0.96
CLN6-201ENST00000249806 MAGED1Q9Y5V3 778 aaPredicted RBP21.02■□□□□ 0.96
CLN6-201ENST00000249806 ALPK3Q96L96 1907 aa21.02■□□□□ 0.95
CLN6-201ENST00000249806 NPIPB8E9PQR5 432 aa21.01■□□□□ 0.95
CLN6-201ENST00000249806 CXCR6O00574 342 aa21.01■□□□□ 0.95
CLN6-201ENST00000249806 VILLO15195 856 aa21.01■□□□□ 0.95
CLN6-201ENST00000249806 RECQL5O94762 991 aaPredicted RBP21.01■□□□□ 0.95
CLN6-201ENST00000249806 SNAP29O95721 258 aa21.01■□□□□ 0.95
CLN6-201ENST00000249806 CATP04040 527 aaKnown RBP21.01■□□□□ 0.95
CLN6-201ENST00000249806 EN2P19622 333 aaPredicted RBP21.01■□□□□ 0.95
CLN6-201ENST00000249806 MAPK1P28482 360 aa21.01■□□□□ 0.95
CLN6-201ENST00000249806 GAB4Q2WGN9 574 aa21.01■□□□□ 0.95
CLN6-201ENST00000249806 GPR180Q86V85 440 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms