RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 RALGPS1Q5JS13 557 aa10.88□□□□□ -0.67
MSH6-201ENST00000234420 DCST1Q5T197 706 aa10.88□□□□□ -0.67
MSH6-201ENST00000234420 STXBP5Q5T5C0 1151 aa10.88□□□□□ -0.67
MSH6-201ENST00000234420 AP2M1Q96CW1 435 aa10.88□□□□□ -0.67
MSH6-201ENST00000234420 CERS2Q96G23 380 aa10.88□□□□□ -0.67
MSH6-201ENST00000234420 EBPLQ9BY08 206 aa10.88□□□□□ -0.67
MSH6-201ENST00000234420 TIGARQ9NQ88 270 aa10.88□□□□□ -0.67
MSH6-201ENST00000234420 E5RJQ4 531 aa10.88□□□□□ -0.67
MSH6-201ENST00000234420 B4GALT2O60909 372 aa10.88□□□□□ -0.67
MSH6-201ENST00000234420 RPL10P27635 214 aaKnown RBP10.88□□□□□ -0.67
MSH6-201ENST00000234420 ALDH3B1P43353 468 aa10.88□□□□□ -0.67
MSH6-201ENST00000234420 ADGRE1Q14246 886 aa10.88□□□□□ -0.67
MSH6-201ENST00000234420 TGFBIQ15582 683 aa10.88□□□□□ -0.67
MSH6-201ENST00000234420 CASTOR1Q8WTX7 329 aa10.88□□□□□ -0.67
MSH6-201ENST00000234420 C16orf58Q96GQ5 468 aa10.88□□□□□ -0.67
MSH6-201ENST00000234420 KCTD7Q96MP8 289 aa10.88□□□□□ -0.67
MSH6-201ENST00000234420 OR2M4Q96R27 311 aa10.88□□□□□ -0.67
MSH6-201ENST00000234420 PPIL3Q9H2H8 161 aaKnown RBP10.88□□□□□ -0.67
MSH6-201ENST00000234420 OR12D3Q9UGF7 316 aa10.88□□□□□ -0.67
MSH6-201ENST00000234420 CHMP24386 653 aa10.88□□□□□ -0.67
MSH6-201ENST00000234420 SNRPFP62306 86 aaKnown RBP10.88□□□□□ -0.67
MSH6-201ENST00000234420 NUP54Q7Z3B4 507 aa10.88□□□□□ -0.67
MSH6-201ENST00000234420 NYAP2Q9P242 653 aa10.88□□□□□ -0.67
MSH6-201ENST00000234420 ASTN2O75129 1339 aaPredicted RBP10.88□□□□□ -0.67
MSH6-201ENST00000234420 BIVM-ERCC5R4GMW8 1640 aa10.88□□□□□ -0.67
MSH6-201ENST00000234420 CROCC2H7BZ55 1655 aa10.88□□□□□ -0.67
MSH6-201ENST00000234420 F5H0A9 414 aaPredicted RBP10.88□□□□□ -0.67
MSH6-201ENST00000234420 F8VP50 259 aa10.88□□□□□ -0.67
MSH6-201ENST00000234420 SNAPC5O75971 98 aa10.88□□□□□ -0.67
MSH6-201ENST00000234420 C22orf31O95567 290 aa10.88□□□□□ -0.67
MSH6-201ENST00000234420 IFNA17P01571 189 aa10.88□□□□□ -0.67
MSH6-201ENST00000234420 NFE2L1Q14494 772 aa10.88□□□□□ -0.67
MSH6-201ENST00000234420 ZBED5Q49AG3 693 aa10.88□□□□□ -0.67
MSH6-201ENST00000234420 GPR153Q6NV75 609 aa10.88□□□□□ -0.67
MSH6-201ENST00000234420 DLK2Q6UY11 383 aa10.88□□□□□ -0.67
MSH6-201ENST00000234420 RFKQ969G6 155 aa10.88□□□□□ -0.67
MSH6-201ENST00000234420 ZDHHC4Q9NPG8 344 aa10.88□□□□□ -0.67
MSH6-201ENST00000234420 GLS2Q9UI32 602 aa10.88□□□□□ -0.67
MSH6-201ENST00000234420 OXSR1O95747 527 aaPredicted RBP10.88□□□□□ -0.67
MSH6-201ENST00000234420 TNFRSF8P28908 595 aa10.88□□□□□ -0.67
MSH6-201ENST00000234420 CDH5P33151 784 aaPredicted RBP10.88□□□□□ -0.67
MSH6-201ENST00000234420 GABRB2P47870 512 aa10.88□□□□□ -0.67
MSH6-201ENST00000234420 FIGNQ5HY92 759 aa10.88□□□□□ -0.67
MSH6-201ENST00000234420 TATDN1Q6P1N9 297 aa10.88□□□□□ -0.67
MSH6-201ENST00000234420 GRASPQ7Z6J2 395 aaPredicted RBP10.88□□□□□ -0.67
MSH6-201ENST00000234420 LHFPL3Q86UP9 236 aa10.88□□□□□ -0.67
MSH6-201ENST00000234420 PIWIL1Q96J94 861 aaKnown RBP10.88□□□□□ -0.67
MSH6-201ENST00000234420 ATXN7L1Q9ULK2 861 aaPredicted RBP10.88□□□□□ -0.67
MSH6-201ENST00000234420 CFL2Q9Y281 166 aa10.88□□□□□ -0.67
MSH6-201ENST00000234420 MFHAS1Q9Y4C4 1052 aa10.88□□□□□ -0.67
MSH6-201ENST00000234420 ELOVL7A1L3X0 281 aa10.87□□□□□ -0.67
MSH6-201ENST00000234420 UROSP10746 265 aa10.87□□□□□ -0.67
MSH6-201ENST00000234420 CCND3P30281 292 aaPredicted RBP10.87□□□□□ -0.67
MSH6-201ENST00000234420 PPP3CAQ08209 521 aa10.87□□□□□ -0.67
MSH6-201ENST00000234420 ZNF829Q3KNS6 432 aaPredicted RBP10.87□□□□□ -0.67
MSH6-201ENST00000234420 CELF3Q5SZQ8 465 aaKnown RBP10.87□□□□□ -0.67
MSH6-201ENST00000234420 PKP4Q99569 1192 aa10.87□□□□□ -0.67
MSH6-201ENST00000234420 PCDHB16Q9NRJ7 776 aa10.87□□□□□ -0.67
MSH6-201ENST00000234420 ABCB8Q9NUT2 735 aa10.87□□□□□ -0.67
MSH6-201ENST00000234420 ZFP37Q9Y6Q3 630 aaPredicted RBP10.87□□□□□ -0.67
MSH6-201ENST00000234420 ATG2BQ96BY7 2078 aa10.87□□□□□ -0.67
MSH6-201ENST00000234420 CEP170Q5SW79 1584 aa10.87□□□□□ -0.67
MSH6-201ENST00000234420 PTPRTO14522 1441 aa10.87□□□□□ -0.67
MSH6-201ENST00000234420 ZNF878C9JN71 531 aa10.87□□□□□ -0.67
MSH6-201ENST00000234420 PITPNM1O00562 1244 aa10.87□□□□□ -0.67
MSH6-201ENST00000234420 KCNJ13O60928 360 aa10.87□□□□□ -0.67
MSH6-201ENST00000234420 TNFSF9P41273 254 aa10.87□□□□□ -0.67
MSH6-201ENST00000234420 RGS8P57771 180 aaPredicted RBP10.87□□□□□ -0.67
MSH6-201ENST00000234420 RAB10P61026 200 aa10.87□□□□□ -0.67
MSH6-201ENST00000234420 NPTX1Q15818 432 aa10.87□□□□□ -0.67
MSH6-201ENST00000234420 GPRC6AQ5T6X5 926 aa10.87□□□□□ -0.67
MSH6-201ENST00000234420 REP15Q6BDI9 236 aa10.87□□□□□ -0.67
MSH6-201ENST00000234420 CHSY3Q70JA7 882 aa10.87□□□□□ -0.67
MSH6-201ENST00000234420 CPSF7Q8N684 471 aaKnown RBP10.87□□□□□ -0.67
MSH6-201ENST00000234420 TAS1R2Q8TE23 839 aa10.87□□□□□ -0.67
MSH6-201ENST00000234420 XAGE5Q8WWM1 108 aa10.87□□□□□ -0.67
MSH6-201ENST00000234420 LURAP1Q96LR2 239 aa10.87□□□□□ -0.67
MSH6-201ENST00000234420 SEMA3CQ99985 751 aa10.87□□□□□ -0.67
MSH6-201ENST00000234420 TRAF6Q9Y4K3 522 aa10.87□□□□□ -0.67
MSH6-201ENST00000234420 PRKAR1BP31321 381 aa10.87□□□□□ -0.67
MSH6-201ENST00000234420 CD47Q08722 323 aa10.87□□□□□ -0.67
MSH6-201ENST00000234420 CRYBG2Q8N1P7 616 aa10.87□□□□□ -0.67
MSH6-201ENST00000234420 OR8K5Q8NH50 307 aa10.87□□□□□ -0.67
MSH6-201ENST00000234420 ZDHHC15Q96MV8 337 aa10.87□□□□□ -0.67
MSH6-201ENST00000234420 CARS2Q9HA77 564 aaKnown RBP10.87□□□□□ -0.67
MSH6-201ENST00000234420 ZNF334Q9HCZ1 680 aaPredicted RBP10.87□□□□□ -0.67
MSH6-201ENST00000234420 DDX4Q9NQI0 724 aaKnown RBP10.87□□□□□ -0.67
MSH6-201ENST00000234420 WDR45Q9Y484 360 aa10.87□□□□□ -0.67
MSH6-201ENST00000234420 A8MVJ9 347 aa10.87□□□□□ -0.67
MSH6-201ENST00000234420 TREHO43280 583 aa10.87□□□□□ -0.67
MSH6-201ENST00000234420 MPZL2O60487 215 aa10.87□□□□□ -0.67
MSH6-201ENST00000234420 UBXN7O94888 489 aa10.87□□□□□ -0.67
MSH6-201ENST00000234420 PAPSS2O95340 614 aaPredicted RBP10.87□□□□□ -0.67
MSH6-201ENST00000234420 ZBTB48P10074 688 aaPredicted RBP10.87□□□□□ -0.67
MSH6-201ENST00000234420 POLR2JP52435 117 aaKnown RBP10.87□□□□□ -0.67
MSH6-201ENST00000234420 CDH12P55289 794 aa10.87□□□□□ -0.67
MSH6-201ENST00000234420 DYRK1AQ13627 763 aa10.87□□□□□ -0.67
MSH6-201ENST00000234420 PIWIL4Q7Z3Z4 852 aaKnown RBP10.87□□□□□ -0.67
MSH6-201ENST00000234420 CCDC71Q8IV32 467 aaPredicted RBP10.87□□□□□ -0.67
MSH6-201ENST00000234420 TMEM161BQ8NDZ6 487 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms