RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 CYP4F2P78329 520 aa13.2□□□□□ -0.3
VEGFA-201ENST00000230480 ACY1Q03154 408 aa13.2□□□□□ -0.3
VEGFA-201ENST00000230480 DLG1Q12959 904 aa13.2□□□□□ -0.3
VEGFA-201ENST00000230480 MAP7Q14244 749 aa13.2□□□□□ -0.3
VEGFA-201ENST00000230480 PPP1R3AQ16821 1122 aa13.2□□□□□ -0.3
VEGFA-201ENST00000230480 ZNF425Q6IV72 752 aa13.2□□□□□ -0.3
VEGFA-201ENST00000230480 FAM45BPQ6NSW5 357 aa13.2□□□□□ -0.3
VEGFA-201ENST00000230480 FAM199XQ6PEV8 388 aaPredicted RBP13.2□□□□□ -0.3
VEGFA-201ENST00000230480 FIGLAQ6QHK4 219 aa13.2□□□□□ -0.3
VEGFA-201ENST00000230480 CCDC25Q86WR0 208 aa13.2□□□□□ -0.3
VEGFA-201ENST00000230480 PPP1R3BQ86XI6 285 aa13.2□□□□□ -0.3
VEGFA-201ENST00000230480 PALM2Q8IXS6 379 aa13.2□□□□□ -0.3
VEGFA-201ENST00000230480 CACNA2D3Q8IZS8 1091 aa13.2□□□□□ -0.3
VEGFA-201ENST00000230480 DTWD1Q8N5C7 304 aa13.2□□□□□ -0.3
VEGFA-201ENST00000230480 FAM45AQ8TCE6 357 aa13.2□□□□□ -0.3
VEGFA-201ENST00000230480 SKA2Q8WVK7 121 aaPredicted RBP13.2□□□□□ -0.3
VEGFA-201ENST00000230480 LINGO1Q96FE5 620 aa13.2□□□□□ -0.3
VEGFA-201ENST00000230480 RBBP8Q99708 897 aa13.2□□□□□ -0.3
VEGFA-201ENST00000230480 MIPEPQ99797 713 aa13.2□□□□□ -0.3
VEGFA-201ENST00000230480 EPB41L4BQ9H329 900 aa13.2□□□□□ -0.3
VEGFA-201ENST00000230480 SLC22A11Q9NSA0 550 aa13.2□□□□□ -0.3
VEGFA-201ENST00000230480 ZFATQ9P243 1243 aa13.2□□□□□ -0.3
VEGFA-201ENST00000230480 STOX2Q9P2F5 926 aaPredicted RBP13.2□□□□□ -0.3
VEGFA-201ENST00000230480 TRMT6Q9UJA5 497 aaKnown RBP13.2□□□□□ -0.3
VEGFA-201ENST00000230480 RARRES3Q9UL19 164 aa13.2□□□□□ -0.3
VEGFA-201ENST00000230480 CORO1CQ9ULV4 474 aaPredicted RBP13.2□□□□□ -0.3
VEGFA-201ENST00000230480 MRPS18BQ9Y676 258 aaKnown RBP13.2□□□□□ -0.3
VEGFA-201ENST00000230480 BSNQ9UPA5 3926 aa13.19□□□□□ -0.3
VEGFA-201ENST00000230480 LOC105369274A0A096LPK9 316 aa13.19□□□□□ -0.3
VEGFA-201ENST00000230480 LOC102723532A0A0G2JNH3 316 aa13.19□□□□□ -0.3
VEGFA-201ENST00000230480 OR2A25A4D2G3 310 aa13.19□□□□□ -0.3
VEGFA-201ENST00000230480 NDC80O14777 642 aa13.19□□□□□ -0.3
VEGFA-201ENST00000230480 RPN2P04844 631 aa13.19□□□□□ -0.3
VEGFA-201ENST00000230480 FURINP09958 794 aa13.19□□□□□ -0.3
VEGFA-201ENST00000230480 FAM153BP0C7A2 387 aa13.19□□□□□ -0.3
VEGFA-201ENST00000230480 MYBL2P10244 700 aa13.19□□□□□ -0.3
VEGFA-201ENST00000230480 OAS2P29728 719 aaKnown RBP13.19□□□□□ -0.3
VEGFA-201ENST00000230480 PNLIPRP1P54315 467 aa13.19□□□□□ -0.3
VEGFA-201ENST00000230480 VAC14Q08AM6 782 aa13.19□□□□□ -0.3
VEGFA-201ENST00000230480 ARHGAP19Q14CB8 494 aa13.19□□□□□ -0.3
VEGFA-201ENST00000230480 ZKSCAN8Q15776 578 aaPredicted RBP13.19□□□□□ -0.3
VEGFA-201ENST00000230480 TTLL9Q3SXZ7 439 aa13.19□□□□□ -0.3
VEGFA-201ENST00000230480 FAM153CQ494X1 144 aa13.19□□□□□ -0.3
VEGFA-201ENST00000230480 GLE1Q53GS7 698 aaKnown RBP13.19□□□□□ -0.3
VEGFA-201ENST00000230480 ARHGAP40Q5TG30 622 aa13.19□□□□□ -0.3
VEGFA-201ENST00000230480 LRRC69Q6ZNQ3 347 aa13.19□□□□□ -0.3
VEGFA-201ENST00000230480 UBE2R2Q712K3 238 aaPredicted RBP13.19□□□□□ -0.3
VEGFA-201ENST00000230480 NLGN4XQ8N0W4 816 aa13.19□□□□□ -0.3
VEGFA-201ENST00000230480 OR4N4Q8N0Y3 316 aa13.19□□□□□ -0.3
VEGFA-201ENST00000230480 SHISA5Q8N114 240 aa13.19□□□□□ -0.3
VEGFA-201ENST00000230480 SPATA6LQ8N4H0 392 aa13.19□□□□□ -0.3
VEGFA-201ENST00000230480 ARHGEF39Q8N4T4 335 aa13.19□□□□□ -0.3
VEGFA-201ENST00000230480 NLGN4YQ8NFZ3 816 aaPredicted RBP13.19□□□□□ -0.3
VEGFA-201ENST00000230480 TTC9Q92623 222 aa13.19□□□□□ -0.3
VEGFA-201ENST00000230480 TCTN2Q96GX1 697 aa13.19□□□□□ -0.3
VEGFA-201ENST00000230480 UBXN10Q96LJ8 280 aa13.19□□□□□ -0.3
VEGFA-201ENST00000230480 OR4K3Q96R72 315 aa13.19□□□□□ -0.3
VEGFA-201ENST00000230480 GPR22Q99680 433 aa13.19□□□□□ -0.3
VEGFA-201ENST00000230480 ULBP3Q9BZM4 244 aa13.19□□□□□ -0.3
VEGFA-201ENST00000230480 CCDC68Q9H2F9 335 aa13.19□□□□□ -0.3
VEGFA-201ENST00000230480 CDC42EP4Q9H3Q1 356 aaKnown RBP13.19□□□□□ -0.3
VEGFA-201ENST00000230480 PDE7BQ9NP56 450 aa13.19□□□□□ -0.3
VEGFA-201ENST00000230480 FAM114A2Q9NRY5 505 aa13.19□□□□□ -0.3
VEGFA-201ENST00000230480 PCMTD2Q9NV79 361 aa13.19□□□□□ -0.3
VEGFA-201ENST00000230480 SLC39A10Q9ULF5 831 aa13.19□□□□□ -0.3
VEGFA-201ENST00000230480 PCDHGA4Q9Y5G9 962 aa13.19□□□□□ -0.3
VEGFA-201ENST00000230480 COL6A6A6NMZ7 2263 aa13.19□□□□□ -0.3
VEGFA-201ENST00000230480 KALRNO60229 2985 aa13.18□□□□□ -0.3
VEGFA-201ENST00000230480 TMEM150CB9EJG8 249 aa13.18□□□□□ -0.3
VEGFA-201ENST00000230480 NKX2-8O15522 239 aa13.18□□□□□ -0.3
VEGFA-201ENST00000230480 PHGDHO43175 533 aaKnown RBP13.18□□□□□ -0.3
VEGFA-201ENST00000230480 CNOT3O75175 753 aaKnown RBP13.18□□□□□ -0.3
VEGFA-201ENST00000230480 CATP04040 527 aaKnown RBP13.18□□□□□ -0.3
VEGFA-201ENST00000230480 CXADRP78310 365 aa13.18□□□□□ -0.3
VEGFA-201ENST00000230480 NFKB2Q00653 900 aa13.18□□□□□ -0.3
VEGFA-201ENST00000230480 ABHD18Q0P651 414 aa13.18□□□□□ -0.3
VEGFA-201ENST00000230480 LINC00303Q3SY05 128 aa13.18□□□□□ -0.3
VEGFA-201ENST00000230480 FAM69BQ5VUD6 431 aa13.18□□□□□ -0.3
VEGFA-201ENST00000230480 FRMPD2BQ6IN97 320 aa13.18□□□□□ -0.3
VEGFA-201ENST00000230480 UGT3A1Q6NUS8 523 aa13.18□□□□□ -0.3
VEGFA-201ENST00000230480 C6orf15Q6UXA7 325 aaPredicted RBP13.18□□□□□ -0.3
VEGFA-201ENST00000230480 BPHLQ86WA6 291 aaPredicted RBP13.18□□□□□ -0.3
VEGFA-201ENST00000230480 PAQR7Q86WK9 346 aa13.18□□□□□ -0.3
VEGFA-201ENST00000230480 MCATQ8IVS2 390 aaKnown RBP13.18□□□□□ -0.3
VEGFA-201ENST00000230480 MNS1Q8NEH6 495 aa13.18□□□□□ -0.3
VEGFA-201ENST00000230480 LRFN5Q96NI6 719 aa13.18□□□□□ -0.3
VEGFA-201ENST00000230480 ACAT2Q9BWD1 397 aa13.18□□□□□ -0.3
VEGFA-201ENST00000230480 UNKQ9C0B0 810 aaKnown RBP13.18□□□□□ -0.3
VEGFA-201ENST00000230480 PARVBQ9HBI1 364 aa13.18□□□□□ -0.3
VEGFA-201ENST00000230480 LHX9Q9NQ69 397 aa13.18□□□□□ -0.3
VEGFA-201ENST00000230480 CUEDC1Q9NWM3 386 aaPredicted RBP13.18□□□□□ -0.3
VEGFA-201ENST00000230480 SOHLH2Q9NX45 425 aa13.18□□□□□ -0.3
VEGFA-201ENST00000230480 EURLQ9NYK6 297 aa13.18□□□□□ -0.3
VEGFA-201ENST00000230480 PCDHB3Q9Y5E6 796 aa13.18□□□□□ -0.3
VEGFA-201ENST00000230480 SCN3AQ9NY46 2000 aa13.18□□□□□ -0.3
VEGFA-201ENST00000230480 SLC16A5O15375 505 aa13.17□□□□□ -0.3
VEGFA-201ENST00000230480 ZNF749O43361 778 aa13.17□□□□□ -0.3
VEGFA-201ENST00000230480 SCRG1O75711 98 aa13.17□□□□□ -0.3
VEGFA-201ENST00000230480 SLU7O95391 586 aaKnown RBP13.17□□□□□ -0.3
VEGFA-201ENST00000230480 MAP4P27816 1152 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms