RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 C2orf78A6NCI8 922 aa16.82■□□□□ 0.28
USB1-201ENST00000219281 M0QX08 132 aa16.82■□□□□ 0.28
USB1-201ENST00000219281 WNT9AO14904 365 aa16.82■□□□□ 0.28
USB1-201ENST00000219281 HOXA2O43364 376 aa16.82■□□□□ 0.28
USB1-201ENST00000219281 ADAM23O75077 832 aa16.82■□□□□ 0.28
USB1-201ENST00000219281 C1QCP02747 245 aa16.82■□□□□ 0.28
USB1-201ENST00000219281 CXCL10P02778 98 aa16.82■□□□□ 0.28
USB1-201ENST00000219281 EPORP19235 508 aa16.82■□□□□ 0.28
USB1-201ENST00000219281 CLK3P49761 638 aaKnown RBP16.82■□□□□ 0.28
USB1-201ENST00000219281 HTRA3P83110 453 aa16.82■□□□□ 0.28
USB1-201ENST00000219281 ABHD18Q0P651 414 aa16.82■□□□□ 0.28
USB1-201ENST00000219281 ACOX1Q15067 660 aa16.82■□□□□ 0.28
USB1-201ENST00000219281 ADPRMQ3LIE5 342 aa16.82■□□□□ 0.28
USB1-201ENST00000219281 LAIR1Q6GTX8 287 aa16.82■□□□□ 0.28
USB1-201ENST00000219281 SLC8B1Q6J4K2 584 aa16.82■□□□□ 0.28
USB1-201ENST00000219281 CCDC81Q6ZN84 652 aa16.82■□□□□ 0.28
USB1-201ENST00000219281 DEFB128Q7Z7B8 93 aa16.82■□□□□ 0.28
USB1-201ENST00000219281 SLC22A15Q8IZD6 547 aa16.82■□□□□ 0.28
USB1-201ENST00000219281 SETD9Q8NE22 299 aa16.82■□□□□ 0.28
USB1-201ENST00000219281 GLMNQ92990 594 aa16.82■□□□□ 0.28
USB1-201ENST00000219281 SLC29A3Q9BZD2 475 aa16.82■□□□□ 0.28
USB1-201ENST00000219281 WDR12Q9GZL7 423 aaKnown RBP16.82■□□□□ 0.28
USB1-201ENST00000219281 RDH14Q9HBH5 336 aa16.82■□□□□ 0.28
USB1-201ENST00000219281 PAK6Q9NQU5 681 aaPredicted RBP16.82■□□□□ 0.28
USB1-201ENST00000219281 AFF4Q9UHB7 1163 aaKnown RBP16.82■□□□□ 0.28
USB1-201ENST00000219281 PCDHGA10Q9Y5H3 936 aa16.82■□□□□ 0.28
USB1-201ENST00000219281 GLYATL1P3A0A0U1RQE8 302 aa16.81■□□□□ 0.28
USB1-201ENST00000219281 M0R3G1 203 aa16.81■□□□□ 0.28
USB1-201ENST00000219281 DIRAS1O95057 198 aa16.81■□□□□ 0.28
USB1-201ENST00000219281 BPIP17213 487 aa16.81■□□□□ 0.28
USB1-201ENST00000219281 HOXB9P17482 250 aaPredicted RBP16.81■□□□□ 0.28
USB1-201ENST00000219281 OR1D2P34982 312 aa16.81■□□□□ 0.28
USB1-201ENST00000219281 HNF1BP35680 557 aa16.81■□□□□ 0.28
USB1-201ENST00000219281 HPCAL1P37235 193 aa16.81■□□□□ 0.28
USB1-201ENST00000219281 CSKP41240 450 aa16.81■□□□□ 0.28
USB1-201ENST00000219281 MAGEA2P43356 314 aa16.81■□□□□ 0.28
USB1-201ENST00000219281 VBP1P61758 197 aa16.81■□□□□ 0.28
USB1-201ENST00000219281 OXA1LQ15070 435 aa16.81■□□□□ 0.28
USB1-201ENST00000219281 ABCG8Q9H221 673 aa16.81■□□□□ 0.28
USB1-201ENST00000219281 TRPM5Q9NZQ8 1165 aa16.81■□□□□ 0.28
USB1-201ENST00000219281 TRBV5-4A0A0C4DH59 114 aa16.81■□□□□ 0.28
USB1-201ENST00000219281 KRBA1A5PL33 1030 aa16.81■□□□□ 0.28
USB1-201ENST00000219281 TMEM221A6NGB7 291 aa16.81■□□□□ 0.28
USB1-201ENST00000219281 ANXA5P08758 320 aa16.81■□□□□ 0.28
USB1-201ENST00000219281 HMGA1P17096 107 aaKnown RBP16.81■□□□□ 0.28
USB1-201ENST00000219281 MAGEA8P43361 318 aa16.81■□□□□ 0.28
USB1-201ENST00000219281 PRMT2P55345 433 aa16.81■□□□□ 0.28
USB1-201ENST00000219281 MACC1Q6ZN28 852 aa16.81■□□□□ 0.28
USB1-201ENST00000219281 BEND7Q8N7W2 519 aaPredicted RBP16.81■□□□□ 0.28
USB1-201ENST00000219281 WFDC5Q8TCV5 224 aa16.81■□□□□ 0.28
USB1-201ENST00000219281 EGLN2Q96KS0 407 aa16.81■□□□□ 0.28
USB1-201ENST00000219281 RHNO1Q9BSD3 238 aa16.81■□□□□ 0.28
USB1-201ENST00000219281 KLF16Q9BXK1 252 aaPredicted RBP16.81■□□□□ 0.28
USB1-201ENST00000219281 MROQ9BYG7 248 aa16.81■□□□□ 0.28
USB1-201ENST00000219281 ARL15Q9NXU5 204 aa16.81■□□□□ 0.28
USB1-201ENST00000219281 SAMD4AQ9UPU9 718 aaKnown RBP16.81■□□□□ 0.28
USB1-201ENST00000219281 TPRKBQ9Y3C4 175 aa16.81■□□□□ 0.28
USB1-201ENST00000219281 TMEM247A6NEH6 219 aa16.8■□□□□ 0.28
USB1-201ENST00000219281 hCG_2039718K7EN88 272 aa16.8■□□□□ 0.28
USB1-201ENST00000219281 RFXANKO14593 260 aa16.8■□□□□ 0.28
USB1-201ENST00000219281 SLC22A1O15245 554 aa16.8■□□□□ 0.28
USB1-201ENST00000219281 SMAD6O43541 496 aaKnown RBP16.8■□□□□ 0.28
USB1-201ENST00000219281 CCNDBP1O95273 360 aa16.8■□□□□ 0.28
USB1-201ENST00000219281 PARNO95453 639 aaKnown RBP16.8■□□□□ 0.28
USB1-201ENST00000219281 NADKO95544 446 aaPredicted RBP16.8■□□□□ 0.28
USB1-201ENST00000219281 TRBC1P01850 177 aa16.8■□□□□ 0.28
USB1-201ENST00000219281 RPIAP49247 311 aa16.8■□□□□ 0.28
USB1-201ENST00000219281 SEMG2Q02383 582 aa16.8■□□□□ 0.28
USB1-201ENST00000219281 DGCR6Q14129 220 aa16.8■□□□□ 0.28
USB1-201ENST00000219281 GBX1Q14549 363 aa16.8■□□□□ 0.28
USB1-201ENST00000219281 OR4F3Q6IEY1 312 aa16.8■□□□□ 0.28
USB1-201ENST00000219281 OR2T5Q6IEZ7 315 aa16.8■□□□□ 0.28
USB1-201ENST00000219281 GALNT10Q86SR1 603 aa16.8■□□□□ 0.28
USB1-201ENST00000219281 OR2T29Q8NH02 315 aa16.8■□□□□ 0.28
USB1-201ENST00000219281 OVCA2Q8WZ82 227 aa16.8■□□□□ 0.28
USB1-201ENST00000219281 VWCEQ96DN2 955 aa16.8■□□□□ 0.28
USB1-201ENST00000219281 YIPF6Q96EC8 236 aa16.8■□□□□ 0.28
USB1-201ENST00000219281 VMP1Q96GC9 406 aa16.8■□□□□ 0.28
USB1-201ENST00000219281 MYOCQ99972 504 aa16.8■□□□□ 0.28
USB1-201ENST00000219281 ALOXE3Q9BYJ1 711 aa16.8■□□□□ 0.28
USB1-201ENST00000219281 SLC32A1Q9H598 525 aa16.8■□□□□ 0.28
USB1-201ENST00000219281 ELOVL6Q9H5J4 265 aa16.8■□□□□ 0.28
USB1-201ENST00000219281 GMPPBQ9Y5P6 360 aa16.8■□□□□ 0.28
USB1-201ENST00000219281 SEC24AO95486 1093 aa16.8■□□□□ 0.28
USB1-201ENST00000219281 PRPS2P11908 318 aa16.8■□□□□ 0.28
USB1-201ENST00000219281 JUNDP17535 347 aa16.8■□□□□ 0.28
USB1-201ENST00000219281 SDC1P18827 310 aa16.8■□□□□ 0.28
USB1-201ENST00000219281 ACVR2AP27037 513 aa16.8■□□□□ 0.28
USB1-201ENST00000219281 PSMB9P28065 219 aa16.8■□□□□ 0.28
USB1-201ENST00000219281 RXRGP48443 463 aa16.8■□□□□ 0.28
USB1-201ENST00000219281 MASP1P48740 699 aa16.8■□□□□ 0.28
USB1-201ENST00000219281 ALDH7A1P49419 539 aaKnown RBP16.8■□□□□ 0.28
USB1-201ENST00000219281 ARHGDIAP52565 204 aa16.8■□□□□ 0.28
USB1-201ENST00000219281 AP1S1P61966 158 aa16.8■□□□□ 0.28
USB1-201ENST00000219281 SLC35A2P78381 396 aa16.8■□□□□ 0.28
USB1-201ENST00000219281 BCL2L1Q07817 233 aa16.8■□□□□ 0.28
USB1-201ENST00000219281 CD300CQ08708 224 aa16.8■□□□□ 0.28
USB1-201ENST00000219281 PAGE2BQ5JRK9 111 aa16.8■□□□□ 0.28
USB1-201ENST00000219281 TMEM236Q5W0B7 351 aa16.8■□□□□ 0.28
USB1-201ENST00000219281 CAPN13Q6MZZ7 669 aaPredicted RBP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms