RNA–Protein interactions for RNA: ENST00000199706.12

MRPL28-201, Transcript of mitochondrial ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL28, Length 1,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-201ENST00000199706 SMYD2Q9NRG4 433 aa16.76■□□□□ 0.27
MRPL28-201ENST00000199706 TXNDC16Q9P2K2 825 aa16.76■□□□□ 0.27
MRPL28-201ENST00000199706 DMGDHQ9UI17 866 aaKnown RBP16.76■□□□□ 0.27
MRPL28-201ENST00000199706 PADI1Q9ULC6 663 aa16.76■□□□□ 0.27
MRPL28-201ENST00000199706 NOVA2Q9UNW9 492 aaKnown RBP16.76■□□□□ 0.27
MRPL28-201ENST00000199706 PLCL2Q9UPR0 1127 aa16.76■□□□□ 0.27
MRPL28-201ENST00000199706 ANKRD12Q6UB98 2062 aa16.75■□□□□ 0.27
MRPL28-201ENST00000199706 E7ENX8 843 aa16.75■□□□□ 0.27
MRPL28-201ENST00000199706 ITGB2P05107 769 aa16.75■□□□□ 0.27
MRPL28-201ENST00000199706 LIFP15018 202 aa16.75■□□□□ 0.27
MRPL28-201ENST00000199706 RORAP35398 523 aa16.75■□□□□ 0.27
MRPL28-201ENST00000199706 ABATP80404 500 aa16.75■□□□□ 0.27
MRPL28-201ENST00000199706 MC1RQ01726 317 aa16.75■□□□□ 0.27
MRPL28-201ENST00000199706 TAP2Q03519 686 aa16.75■□□□□ 0.27
MRPL28-201ENST00000199706 ZC3H12BQ5HYM0 836 aaKnown RBP16.75■□□□□ 0.27
MRPL28-201ENST00000199706 TLDC1Q6P9B6 456 aa16.75■□□□□ 0.27
MRPL28-201ENST00000199706 VASH2Q86V25 355 aa16.75■□□□□ 0.27
MRPL28-201ENST00000199706 CCDC25Q86WR0 208 aa16.75■□□□□ 0.27
MRPL28-201ENST00000199706 LRRC56Q8IYG6 542 aaPredicted RBP16.75■□□□□ 0.27
MRPL28-201ENST00000199706 GPR135Q8IZ08 494 aa16.75■□□□□ 0.27
MRPL28-201ENST00000199706 NKAPQ8N5F7 415 aaKnown RBP16.75■□□□□ 0.27
MRPL28-201ENST00000199706 GALNT6Q8NCL4 622 aa16.75■□□□□ 0.27
MRPL28-201ENST00000199706 TSPAN17Q96FV3 270 aa16.75■□□□□ 0.27
MRPL28-201ENST00000199706 UBL7Q96S82 380 aaPredicted RBP16.75■□□□□ 0.27
MRPL28-201ENST00000199706 GPR22Q99680 433 aa16.75■□□□□ 0.27
MRPL28-201ENST00000199706 RBBP8Q99708 897 aa16.75■□□□□ 0.27
MRPL28-201ENST00000199706 FUT8Q9BYC5 575 aa16.75■□□□□ 0.27
MRPL28-201ENST00000199706 PCBD2Q9H0N5 130 aa16.75■□□□□ 0.27
MRPL28-201ENST00000199706 GPN2Q9H9Y4 310 aaPredicted RBP16.75■□□□□ 0.27
MRPL28-201ENST00000199706 LHX9Q9NQ69 397 aa16.75■□□□□ 0.27
MRPL28-201ENST00000199706 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.75■□□□□ 0.27
MRPL28-201ENST00000199706 KCND3Q9UK17 655 aa16.75■□□□□ 0.27
MRPL28-201ENST00000199706 SRPK3Q9UPE1 567 aa16.75■□□□□ 0.27
MRPL28-201ENST00000199706 E7EQ34 232 aa16.74■□□□□ 0.27
MRPL28-201ENST00000199706 KALRNO60229 2985 aa16.74■□□□□ 0.27
MRPL28-201ENST00000199706 WISP3O95389 354 aaPredicted RBP16.74■□□□□ 0.27
MRPL28-201ENST00000199706 CCND1P24385 295 aa16.74■□□□□ 0.27
MRPL28-201ENST00000199706 CMPK1P30085 196 aa16.74■□□□□ 0.27
MRPL28-201ENST00000199706 GRIA3P42263 894 aa16.74■□□□□ 0.27
MRPL28-201ENST00000199706 YOD1Q5VVQ6 348 aaPredicted RBP16.74■□□□□ 0.27
MRPL28-201ENST00000199706 KIAA1614Q5VZ46 1190 aa16.74■□□□□ 0.27
MRPL28-201ENST00000199706 FIGLAQ6QHK4 219 aa16.74■□□□□ 0.27
MRPL28-201ENST00000199706 PROKR1Q8TCW9 393 aa16.74■□□□□ 0.27
MRPL28-201ENST00000199706 DLG3Q92796 817 aa16.74■□□□□ 0.27
MRPL28-201ENST00000199706 CRELD1Q96HD1 420 aa16.74■□□□□ 0.27
MRPL28-201ENST00000199706 ELMO2Q96JJ3 720 aa16.74■□□□□ 0.27
MRPL28-201ENST00000199706 FMO2Q99518 471 aa16.74■□□□□ 0.27
MRPL28-201ENST00000199706 GPR87Q9BY21 358 aa16.74■□□□□ 0.27
MRPL28-201ENST00000199706 L2HGDHQ9H9P8 463 aa16.74■□□□□ 0.27
MRPL28-201ENST00000199706 UTP6Q9NYH9 597 aaKnown RBP16.74■□□□□ 0.27
MRPL28-201ENST00000199706 CIDEBQ9UHD4 219 aa16.74■□□□□ 0.27
MRPL28-201ENST00000199706 TSR3Q9UJK0 312 aaKnown RBP16.74■□□□□ 0.27
MRPL28-201ENST00000199706 PDE10AQ9Y233 779 aa16.74■□□□□ 0.27
MRPL28-201ENST00000199706 FER1L5A0AVI2 2057 aa16.74■□□□□ 0.27
MRPL28-201ENST00000199706 LOC101059948A0A1B0GTJ6 334 aa16.73■□□□□ 0.27
MRPL28-201ENST00000199706 OR2A25A4D2G3 310 aa16.73■□□□□ 0.27
MRPL28-201ENST00000199706 ZNF891A8MT65 544 aaPredicted RBP16.73■□□□□ 0.27
MRPL28-201ENST00000199706 CXorf49A8MYA2 514 aaPredicted RBP16.73■□□□□ 0.27
MRPL28-201ENST00000199706 ERVH48-1M5A8F1 160 aa16.73■□□□□ 0.27
MRPL28-201ENST00000199706 ZSCAN9O15535 394 aaPredicted RBP16.73■□□□□ 0.27
MRPL28-201ENST00000199706 SRPX2O60687 465 aaPredicted RBP16.73■□□□□ 0.27
MRPL28-201ENST00000199706 OR2B3O76000 313 aa16.73■□□□□ 0.27
MRPL28-201ENST00000199706 HRH2P25021 359 aa16.73■□□□□ 0.27
MRPL28-201ENST00000199706 IMPA1P29218 277 aa16.73■□□□□ 0.27
MRPL28-201ENST00000199706 ECHS1P30084 290 aa16.73■□□□□ 0.27
MRPL28-201ENST00000199706 PHBP35232 272 aa16.73■□□□□ 0.27
MRPL28-201ENST00000199706 RPA3P35244 121 aaPredicted RBP16.73■□□□□ 0.27
MRPL28-201ENST00000199706 GCGRP47871 477 aa16.73■□□□□ 0.27
MRPL28-201ENST00000199706 TAS2R39P59534 338 aa16.73■□□□□ 0.27
MRPL28-201ENST00000199706 PRDX1Q06830 199 aaKnown RBP16.73■□□□□ 0.27
MRPL28-201ENST00000199706 FASTKQ14296 549 aaKnown RBP16.73■□□□□ 0.27
MRPL28-201ENST00000199706 ZKSCAN8Q15776 578 aaPredicted RBP16.73■□□□□ 0.27
MRPL28-201ENST00000199706 KBTBD12Q3ZCT8 623 aa16.73■□□□□ 0.27
MRPL28-201ENST00000199706 TCTE1Q5JU00 501 aa16.73■□□□□ 0.27
MRPL28-201ENST00000199706 GRTP1Q5TC63 336 aa16.73■□□□□ 0.27
MRPL28-201ENST00000199706 FCRL6Q6DN72 434 aa16.73■□□□□ 0.27
MRPL28-201ENST00000199706 RHBDD2Q6NTF9 364 aa16.73■□□□□ 0.27
MRPL28-201ENST00000199706 CAPN12Q6ZSI9 719 aa16.73■□□□□ 0.27
MRPL28-201ENST00000199706 RNF44Q7L0R7 432 aa16.73■□□□□ 0.27
MRPL28-201ENST00000199706 CCDC91Q7Z6B0 441 aa16.73■□□□□ 0.27
MRPL28-201ENST00000199706 TAX1BP1Q86VP1 789 aa16.73■□□□□ 0.27
MRPL28-201ENST00000199706 SYTL1Q8IYJ3 562 aa16.73■□□□□ 0.27
MRPL28-201ENST00000199706 DSELQ8IZU8 1212 aa16.73■□□□□ 0.27
MRPL28-201ENST00000199706 N4BP2L2Q92802 583 aaPredicted RBP16.73■□□□□ 0.27
MRPL28-201ENST00000199706 C17orf62Q9BQA9 187 aa16.73■□□□□ 0.27
MRPL28-201ENST00000199706 KLHL25Q9H0H3 589 aa16.73■□□□□ 0.27
MRPL28-201ENST00000199706 ACTR5Q9H9F9 607 aaPredicted RBP16.73■□□□□ 0.27
MRPL28-201ENST00000199706 EURLQ9NYK6 297 aa16.73■□□□□ 0.27
MRPL28-201ENST00000199706 STOX2Q9P2F5 926 aaPredicted RBP16.73■□□□□ 0.27
MRPL28-201ENST00000199706 ADAMTS6Q9UKP5 1117 aa16.73■□□□□ 0.27
MRPL28-201ENST00000199706 KRT87PA6NCN2 255 aa16.72■□□□□ 0.27
MRPL28-201ENST00000199706 KLK3P07288 261 aaPredicted RBP16.72■□□□□ 0.27
MRPL28-201ENST00000199706 HIST1H2AGP0C0S8 130 aaPredicted RBP16.72■□□□□ 0.27
MRPL28-201ENST00000199706 WT1P19544 449 aaPredicted RBP16.72■□□□□ 0.27
MRPL28-201ENST00000199706 HIST1H2ADP20671 130 aa16.72■□□□□ 0.27
MRPL28-201ENST00000199706 SPRP35270 261 aaPredicted RBP16.72■□□□□ 0.27
MRPL28-201ENST00000199706 CDKL1Q00532 357 aa16.72■□□□□ 0.27
MRPL28-201ENST00000199706 GPS2Q13227 327 aa16.72■□□□□ 0.27
MRPL28-201ENST00000199706 SRSF6Q13247 344 aaKnown RBP16.72■□□□□ 0.27
MRPL28-201ENST00000199706 ARHGAP40Q5TG30 622 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms