RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Clvs1Q9D4C9 354 aa11.61□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Prokr1Q9JKL1 393 aa11.61□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Il20Q9JKV9 176 aa11.61□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Gm595A2AF73 655 aa11.6□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Vmn1r238E9Q373 306 aa11.6□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Slc6a6O35316 621 aa11.6□□□□□ -0.55
Pcif1-201ENSMUST00000041643 ChadO55226 358 aa11.6□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Rc3h2P0C090 1187 aaKnown RBP11.6□□□□□ -0.55
Pcif1-201ENSMUST00000041643 F3P20352 294 aa11.6□□□□□ -0.55
Pcif1-201ENSMUST00000041643 HmgclP38060 325 aa11.6□□□□□ -0.55
Pcif1-201ENSMUST00000041643 QrfprP83861 433 aa11.6□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Pggt1bQ8BUY9 377 aa11.6□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Npsr1Q8BZP8 371 aa11.6□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Piwil4Q8CGT6 848 aa11.6□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Vmn1r24Q8R2D6 296 aa11.6□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Olfr659Q8VGV6 322 aa11.6□□□□□ -0.55
Pcif1-201ENSMUST00000041643 HhatlQ9D1G3 503 aa11.6□□□□□ -0.55
Pcif1-201ENSMUST00000041643 PolhQ9JJN0 694 aa11.6□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Nhsl2B1AXH1 854 aa11.6□□□□□ -0.55
Pcif1-201ENSMUST00000041643 CK137956B1AYM9 596 aa11.6□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Olfr292F8VQ84 308 aa11.6□□□□□ -0.55
Pcif1-201ENSMUST00000041643 BgnP28653 369 aa11.6□□□□□ -0.55
Pcif1-201ENSMUST00000041643 OcmP51879 109 aa11.6□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Q3UY34 256 aa11.6□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Zmiz1Q6P1E1 1072 aa11.6□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Rexo4Q6PAQ4 432 aaKnown RBP11.6□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Pp2d1Q8BVT6 620 aa11.6□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Hat1Q8BY71 416 aa11.6□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Olfr449Q8VGW8 311 aa11.6□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Q99KU6 348 aa11.6□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Q9CR55 154 aa11.6□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Ccdc3Q9D6Y1 273 aa11.6□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Spry1Q9QXV9 313 aa11.6□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Spdye4cI6XKQ3 339 aa11.6□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Znf143O70230 638 aa11.6□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Sh3pxd2aO89032 1124 aa11.6□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Pmp22P16646 161 aa11.6□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Tcea3P23881 347 aaKnown RBP11.6□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Ppm1bP36993 390 aa11.6□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Tshz2Q68FE9 1030 aa11.6□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Kxd1Q80XH1 177 aa11.6□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Slc25a12Q8BH59 677 aa11.6□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Cndp1Q8BUG2 492 aa11.6□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Ninj2Q9JL89 143 aa11.6□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Clic1Q9Z1Q5 241 aaKnown RBP11.6□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Dpp6Q9Z218 804 aa11.6□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Arhgap20Q6IFT4 1182 aa11.6□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Slc16a9Q7TM99 508 aa11.6□□□□□ -0.55
Pcif1-201ENSMUST00000041643 MrgpreQ91ZB7 310 aa11.6□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Ndufs4Q9CXZ1 175 aa11.6□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Nos1apQ9D3A8 503 aa11.6□□□□□ -0.55
Pcif1-201ENSMUST00000041643 CrnnD3YUU6 520 aa11.6□□□□□ -0.55
Pcif1-201ENSMUST00000041643 NfkbieO54910 364 aa11.6□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Tulp3O88413 460 aa11.6□□□□□ -0.55
Pcif1-201ENSMUST00000041643 RapsnP12672 412 aa11.6□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Shox2P70390 331 aa11.6□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Grin2cQ01098 1239 aa11.6□□□□□ -0.55
Pcif1-201ENSMUST00000041643 March5Q3KNM2 278 aa11.6□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Khdc4Q3TCX3 612 aa11.6□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Gm1604bQ3TRG0 118 aa11.6□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Magee2Q52KG3 523 aa11.6□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Gm11992Q5SS90 291 aa11.6□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Asrgl1Q8C0M9 326 aa11.6□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Ttc34Q8C0Q3 554 aa11.6□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Trim8Q99PJ2 551 aa11.6□□□□□ -0.55
Pcif1-201ENSMUST00000041643 TesclQ9DAJ7 231 aa11.6□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Olfr630Q9EQQ7 319 aa11.6□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Vmn2r120E9PX34 856 aa11.59□□□□□ -0.55
Pcif1-201ENSMUST00000041643 PfklP12382 780 aa11.59□□□□□ -0.55
Pcif1-201ENSMUST00000041643 RhoP15409 348 aa11.59□□□□□ -0.55
Pcif1-201ENSMUST00000041643 DbtP53395 482 aa11.59□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Arcn1Q5XJY5 511 aaKnown RBP11.59□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Bend5Q8C6D4 421 aa11.59□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Pcdhga11Q91XY8 933 aa11.59□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Adgrl4Q923X1 739 aa11.59□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Clcc1Q99LI2 539 aa11.59□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Dtwd1Q9D8U7 304 aa11.59□□□□□ -0.55
Pcif1-201ENSMUST00000041643 TyrP11344 533 aa11.59□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Sec24aQ3U2P1 1090 aa11.59□□□□□ -0.55
Pcif1-201ENSMUST00000041643 PtprnQ60673 979 aa11.59□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Tigd3Q7TM95 470 aa11.59□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Ugt2a1Q80X89 528 aa11.59□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Atp6v1hQ8BVE3 483 aa11.59□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Gprc6aQ8K4Z6 928 aa11.59□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Olfr357Q8VFP4 308 aa11.59□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Gtpbp3Q923K4 492 aa11.59□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Ncbp2Q9CQ49 156 aaKnown RBP11.59□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Lrrc34Q9DAM1 415 aa11.59□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Asb1Q9WV74 336 aa11.59□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Slc25a54B1AUS6 473 aa11.59□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Gm13128L7MU96 475 aa11.59□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Fam71e2L7N480 754 aa11.59□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Zfp60P16374 707 aa11.59□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Rpl5P47962 297 aaKnown RBP11.59□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Dab1P97318 588 aa11.59□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Cpt1aP97742 773 aa11.59□□□□□ -0.55
Pcif1-201ENSMUST00000041643 CtscP97821 462 aa11.59□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Dcst1Q059Y8 732 aa11.59□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Usp39Q3TIX9 564 aa11.59□□□□□ -0.55
Pcif1-201ENSMUST00000041643 Itm2aQ61500 263 aa11.59□□□□□ -0.55
Retrieved 100 of 22,080 RNA–protein pairs in 47 ms