RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-222ENST00000641587 SPAM1P38567 509 aa9.7□□□□□ -0.86
PHGDH-222ENST00000641587 PRAMEP78395 509 aa9.7□□□□□ -0.86
PHGDH-222ENST00000641587 IFFO1Q0D2I5 559 aa9.7□□□□□ -0.86
PHGDH-222ENST00000641587 UAP1Q16222 522 aaPredicted RBP9.7□□□□□ -0.86
PHGDH-222ENST00000641587 ANKRD20A4Q4UJ75 823 aa9.7□□□□□ -0.86
PHGDH-222ENST00000641587 UBAP2Q5T6F2 1119 aaKnown RBP9.7□□□□□ -0.86
PHGDH-222ENST00000641587 TSTD2Q5T7W7 516 aa9.7□□□□□ -0.86
PHGDH-222ENST00000641587 C1QL3Q5VWW1 255 aa9.7□□□□□ -0.86
PHGDH-222ENST00000641587 KLHL35Q6PF15 583 aa9.7□□□□□ -0.86
PHGDH-222ENST00000641587 C3orf62Q6ZUJ4 267 aa9.7□□□□□ -0.86
PHGDH-222ENST00000641587 MICALCLQ6ZW33 695 aa9.7□□□□□ -0.86
PHGDH-222ENST00000641587 HDXQ7Z353 690 aa9.7□□□□□ -0.86
PHGDH-222ENST00000641587 BPHLQ86WA6 291 aaPredicted RBP9.7□□□□□ -0.86
PHGDH-222ENST00000641587 TICAM1Q8IUC6 712 aa9.7□□□□□ -0.86
PHGDH-222ENST00000641587 MREGQ8N565 214 aa9.7□□□□□ -0.86
PHGDH-222ENST00000641587 DDHD1Q8NEL9 900 aa9.7□□□□□ -0.86
PHGDH-222ENST00000641587 GSDMBQ8TAX9 411 aa9.7□□□□□ -0.86
PHGDH-222ENST00000641587 DNAJC1Q96KC8 554 aaKnown RBP9.7□□□□□ -0.86
PHGDH-222ENST00000641587 RMDN2Q96LZ7 410 aa9.7□□□□□ -0.86
PHGDH-222ENST00000641587 LRFN5Q96NI6 719 aa9.7□□□□□ -0.86
PHGDH-222ENST00000641587 KIFC1Q9BW19 673 aa9.7□□□□□ -0.86
PHGDH-222ENST00000641587 TRABDQ9H4I3 376 aa9.7□□□□□ -0.86
PHGDH-222ENST00000641587 MRM3Q9HC36 420 aaKnown RBP9.7□□□□□ -0.86
PHGDH-222ENST00000641587 LATS2Q9NRM7 1088 aa9.7□□□□□ -0.86
PHGDH-222ENST00000641587 SLC2A6Q9UGQ3 507 aa9.7□□□□□ -0.86
PHGDH-222ENST00000641587 SLC24A2Q9UI40 661 aa9.7□□□□□ -0.86
PHGDH-222ENST00000641587 NTNG1Q9Y2I2 539 aa9.7□□□□□ -0.86
PHGDH-222ENST00000641587 PKP3Q9Y446 797 aa9.7□□□□□ -0.86
PHGDH-222ENST00000641587 AKAP9Q99996 3911 aa9.69□□□□□ -0.86
PHGDH-222ENST00000641587 CCL22O00626 93 aa9.69□□□□□ -0.86
PHGDH-222ENST00000641587 LDB2O43679 373 aa9.69□□□□□ -0.86
PHGDH-222ENST00000641587 USP1O94782 785 aa9.69□□□□□ -0.86
PHGDH-222ENST00000641587 ABHD2P08910 425 aa9.69□□□□□ -0.86
PHGDH-222ENST00000641587 PVRP15151 417 aa9.69□□□□□ -0.86
PHGDH-222ENST00000641587 ST6GAL1P15907 406 aa9.69□□□□□ -0.86
PHGDH-222ENST00000641587 POU3F2P20265 443 aaPredicted RBP9.69□□□□□ -0.86
PHGDH-222ENST00000641587 CDH3P22223 829 aa9.69□□□□□ -0.86
PHGDH-222ENST00000641587 HMGCLP35914 325 aa9.69□□□□□ -0.86
PHGDH-222ENST00000641587 ZNF140P52738 457 aaPredicted RBP9.69□□□□□ -0.86
PHGDH-222ENST00000641587 GPX6P59796 221 aa9.69□□□□□ -0.86
PHGDH-222ENST00000641587 THOC5Q13769 683 aaKnown RBP9.69□□□□□ -0.86
PHGDH-222ENST00000641587 SLC29A2Q14542 456 aa9.69□□□□□ -0.86
PHGDH-222ENST00000641587 CASP8Q14790 479 aa9.69□□□□□ -0.86
PHGDH-222ENST00000641587 NCF4Q15080 339 aa9.69□□□□□ -0.86
PHGDH-222ENST00000641587 LONRF1Q17RB8 773 aa9.69□□□□□ -0.86
PHGDH-222ENST00000641587 ZRANB3Q5FWF4 1079 aa9.69□□□□□ -0.86
PHGDH-222ENST00000641587 TMTC4Q5T4D3 741 aa9.69□□□□□ -0.86
PHGDH-222ENST00000641587 ARMC3Q5W041 872 aa9.69□□□□□ -0.86
PHGDH-222ENST00000641587 METRNLQ641Q3 311 aa9.69□□□□□ -0.86
PHGDH-222ENST00000641587 STEAP4Q687X5 459 aa9.69□□□□□ -0.86
PHGDH-222ENST00000641587 ARMC6Q6NXE6 501 aa9.69□□□□□ -0.86
PHGDH-222ENST00000641587 CTAGE3PQ8IX95 158 aa9.69□□□□□ -0.86
PHGDH-222ENST00000641587 IQCKQ8N0W5 287 aa9.69□□□□□ -0.86
PHGDH-222ENST00000641587 TMEM102Q8N9M5 508 aaPredicted RBP9.69□□□□□ -0.86
PHGDH-222ENST00000641587 OR4E2Q8NGC2 313 aa9.69□□□□□ -0.86
PHGDH-222ENST00000641587 OR4K2Q8NGD2 314 aa9.69□□□□□ -0.86
PHGDH-222ENST00000641587 OR13C4Q8NGS5 318 aa9.69□□□□□ -0.86
PHGDH-222ENST00000641587 OR6P1Q8NGX9 317 aa9.69□□□□□ -0.86
PHGDH-222ENST00000641587 FBF1Q8TES7 1133 aa9.69□□□□□ -0.86
PHGDH-222ENST00000641587 STYXQ8WUJ0 223 aa9.69□□□□□ -0.86
PHGDH-222ENST00000641587 MRRFQ96E11 262 aaKnown RBP9.69□□□□□ -0.86
PHGDH-222ENST00000641587 MFSD3Q96ES6 412 aa9.69□□□□□ -0.86
PHGDH-222ENST00000641587 C5orf34Q96MH7 638 aa9.69□□□□□ -0.86
PHGDH-222ENST00000641587 ZNF778Q96MU6 729 aa9.69□□□□□ -0.86
PHGDH-222ENST00000641587 CCDC77Q9BR77 488 aa9.69□□□□□ -0.86
PHGDH-222ENST00000641587 KIR3DX1Q9H7L2 352 aa9.69□□□□□ -0.86
PHGDH-222ENST00000641587 ACTR5Q9H9F9 607 aaPredicted RBP9.69□□□□□ -0.86
PHGDH-222ENST00000641587 ZBTB20Q9HC78 741 aaPredicted RBP9.69□□□□□ -0.86
PHGDH-222ENST00000641587 C20orf96Q9NUD7 363 aaPredicted RBP9.69□□□□□ -0.86
PHGDH-222ENST00000641587 IL17CQ9P0M4 197 aa9.69□□□□□ -0.86
PHGDH-222ENST00000641587 POMT2Q9UKY4 750 aa9.69□□□□□ -0.86
PHGDH-222ENST00000641587 G3BP2Q9UN86 482 aaKnown RBP9.69□□□□□ -0.86
PHGDH-222ENST00000641587 SLC5A6Q9Y289 635 aa9.69□□□□□ -0.86
PHGDH-222ENST00000641587 CSAG2Q9Y5P2 127 aa9.69□□□□□ -0.86
PHGDH-222ENST00000641587 GLYATL1P3A0A0U1RQE8 302 aa9.68□□□□□ -0.86
PHGDH-222ENST00000641587 EXOC1LA0A1B0GW35 172 aa9.68□□□□□ -0.86
PHGDH-222ENST00000641587 TCRBV9S1A1TA0A576 114 aa9.68□□□□□ -0.86
PHGDH-222ENST00000641587 GSAPA4D1B5 854 aa9.68□□□□□ -0.86
PHGDH-222ENST00000641587 ANKUB1A6NFN9 424 aa9.68□□□□□ -0.86
PHGDH-222ENST00000641587 MROH6A6NGR9 719 aa9.68□□□□□ -0.86
PHGDH-222ENST00000641587 SMIM23A6NLE4 172 aa9.68□□□□□ -0.86
PHGDH-222ENST00000641587 SGTAO43765 313 aa9.68□□□□□ -0.86
PHGDH-222ENST00000641587 KCNJ13O60928 360 aa9.68□□□□□ -0.86
PHGDH-222ENST00000641587 VAPBO95292 243 aa9.68□□□□□ -0.86
PHGDH-222ENST00000641587 PRF1P14222 555 aa9.68□□□□□ -0.86
PHGDH-222ENST00000641587 CYP2A7P20853 494 aa9.68□□□□□ -0.86
PHGDH-222ENST00000641587 AKT1P31749 480 aa9.68□□□□□ -0.86
PHGDH-222ENST00000641587 HADHAP40939 763 aa9.68□□□□□ -0.86
PHGDH-222ENST00000641587 PREPP48147 710 aa9.68□□□□□ -0.86
PHGDH-222ENST00000641587 CBLBQ13191 982 aa9.68□□□□□ -0.86
PHGDH-222ENST00000641587 MSLNQ13421 630 aaPredicted RBP9.68□□□□□ -0.86
PHGDH-222ENST00000641587 SLC9A5Q14940 896 aa9.68□□□□□ -0.86
PHGDH-222ENST00000641587 EFTUD2Q15029 972 aaKnown RBP eCLIP9.68□□□□□ -0.864e-6■■■■□ 21.9
PHGDH-222ENST00000641587 KLHL38Q2WGJ6 581 aa9.68□□□□□ -0.86
PHGDH-222ENST00000641587 DEFB110Q30KQ9 67 aa9.68□□□□□ -0.86
PHGDH-222ENST00000641587 LDLRAP1Q5SW96 308 aa9.68□□□□□ -0.86
PHGDH-222ENST00000641587 VWA5B1Q5TIE3 1220 aa9.68□□□□□ -0.86
PHGDH-222ENST00000641587 ZNF385CQ66K41 422 aaPredicted RBP9.68□□□□□ -0.86
PHGDH-222ENST00000641587 KIAA0930Q6ICG6 404 aaPredicted RBP9.68□□□□□ -0.86
PHGDH-222ENST00000641587 TRMT10BQ6PF06 316 aaKnown RBP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms