RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 ATP6AP2O75787 350 aa9.44□□□□□ -0.9
PHGDH-215ENST00000641371 MYO1DO94832 1006 aa9.44□□□□□ -0.9
PHGDH-215ENST00000641371 STAMBPO95630 424 aa9.44□□□□□ -0.9
PHGDH-215ENST00000641371 ATP6V1G2O95670 118 aa9.44□□□□□ -0.9
PHGDH-215ENST00000641371 SLC16A8O95907 504 aa9.44□□□□□ -0.9
PHGDH-215ENST00000641371 ALDOCP09972 364 aaKnown RBP9.44□□□□□ -0.9
PHGDH-215ENST00000641371 CHRNB1P11230 501 aa9.44□□□□□ -0.9
PHGDH-215ENST00000641371 DDX5P17844 614 aaKnown RBP9.44□□□□□ -0.9
PHGDH-215ENST00000641371 GABRG2P18507 467 aa9.44□□□□□ -0.9
PHGDH-215ENST00000641371 ITGAXP20702 1163 aa9.44□□□□□ -0.9
PHGDH-215ENST00000641371 JAK1P23458 1154 aa9.44□□□□□ -0.9
PHGDH-215ENST00000641371 GSTM2P28161 218 aa9.44□□□□□ -0.9
PHGDH-215ENST00000641371 PDHA2P29803 388 aa9.44□□□□□ -0.9
PHGDH-215ENST00000641371 GDF5P43026 501 aa9.44□□□□□ -0.9
PHGDH-215ENST00000641371 BDKRB1P46663 353 aa9.44□□□□□ -0.9
PHGDH-215ENST00000641371 CPA2P48052 419 aa9.44□□□□□ -0.9
PHGDH-215ENST00000641371 CLNS1AP54105 237 aaKnown RBP9.44□□□□□ -0.9
PHGDH-215ENST00000641371 STARD6P59095 220 aa9.44□□□□□ -0.9
PHGDH-215ENST00000641371 TBL3Q12788 808 aaKnown RBP9.44□□□□□ -0.9
PHGDH-215ENST00000641371 CHIT1Q13231 466 aa9.44□□□□□ -0.9
PHGDH-215ENST00000641371 RCAN2Q14206 197 aa9.44□□□□□ -0.9
PHGDH-215ENST00000641371 FGL2Q14314 439 aa9.44□□□□□ -0.9
PHGDH-215ENST00000641371 NFE2L1Q14494 772 aa9.44□□□□□ -0.9
PHGDH-215ENST00000641371 CYP2A13Q16696 494 aa9.44□□□□□ -0.9
PHGDH-215ENST00000641371 DPY19L1Q2PZI1 675 aa9.44□□□□□ -0.9
PHGDH-215ENST00000641371 AP5B1Q2VPB7 878 aa9.44□□□□□ -0.9
PHGDH-215ENST00000641371 PYCR3Q53H96 274 aa9.44□□□□□ -0.9
PHGDH-215ENST00000641371 FBXO48Q5FWF7 155 aa9.44□□□□□ -0.9
PHGDH-215ENST00000641371 ATG9BQ674R7 924 aa9.44□□□□□ -0.9
PHGDH-215ENST00000641371 CAPRIN2Q6IMN6 1127 aaKnown RBP9.44□□□□□ -0.9
PHGDH-215ENST00000641371 DOK6Q6PKX4 331 aa9.44□□□□□ -0.9
PHGDH-215ENST00000641371 Q6ZSR9 355 aa9.44□□□□□ -0.9
PHGDH-215ENST00000641371 MSANTD1Q6ZTZ1 278 aa9.44□□□□□ -0.9
PHGDH-215ENST00000641371 CACUL1Q86Y37 369 aa9.44□□□□□ -0.9
PHGDH-215ENST00000641371 MYLK4Q86YV6 388 aaPredicted RBP9.44□□□□□ -0.9
PHGDH-215ENST00000641371 UBALD2Q8IYN6 164 aa9.44□□□□□ -0.9
PHGDH-215ENST00000641371 DEFB107AQ8IZN7 70 aa9.44□□□□□ -0.9
PHGDH-215ENST00000641371 DSELQ8IZU8 1212 aa9.44□□□□□ -0.9
PHGDH-215ENST00000641371 KRT78Q8N1N4 520 aa9.44□□□□□ -0.9
PHGDH-215ENST00000641371 POU5F2Q8N7G0 328 aa9.44□□□□□ -0.9
PHGDH-215ENST00000641371 HMGCLL1Q8TB92 370 aa9.44□□□□□ -0.9
PHGDH-215ENST00000641371 UTP4Q969X6 686 aaKnown RBP9.44□□□□□ -0.9
PHGDH-215ENST00000641371 CMTM7Q96FZ5 175 aa9.44□□□□□ -0.9
PHGDH-215ENST00000641371 MED8Q96G25 268 aa9.44□□□□□ -0.9
PHGDH-215ENST00000641371 FAM161BQ96MY7 647 aa9.44□□□□□ -0.9
PHGDH-215ENST00000641371 OR2M4Q96R27 311 aa9.44□□□□□ -0.9
PHGDH-215ENST00000641371 CDX2Q99626 313 aaPredicted RBP9.44□□□□□ -0.9
PHGDH-215ENST00000641371 DCLRE1BQ9H816 532 aa9.44□□□□□ -0.9
PHGDH-215ENST00000641371 MBNL1Q9NR56 388 aaKnown RBP9.44□□□□□ -0.9
PHGDH-215ENST00000641371 CCDC167Q9P0B6 97 aa9.44□□□□□ -0.9
PHGDH-215ENST00000641371 LEF1Q9UJU2 399 aaPredicted RBP9.44□□□□□ -0.9
PHGDH-215ENST00000641371 TMEM98Q9Y2Y6 226 aa9.44□□□□□ -0.9
PHGDH-215ENST00000641371 RNF11Q9Y3C5 154 aa9.44□□□□□ -0.9
PHGDH-215ENST00000641371 COLEC10Q9Y6Z7 277 aa9.44□□□□□ -0.9
PHGDH-215ENST00000641371 A0A1W2PP18 115 aa9.43□□□□□ -0.9
PHGDH-215ENST00000641371 PRSS38A1L453 326 aa9.43□□□□□ -0.9
PHGDH-215ENST00000641371 C10orf142B7Z368 130 aa9.43□□□□□ -0.9
PHGDH-215ENST00000641371 FOXE1O00358 373 aaPredicted RBP9.43□□□□□ -0.9
PHGDH-215ENST00000641371 MRASO14807 208 aa9.43□□□□□ -0.9
PHGDH-215ENST00000641371 SLC31A1O15431 190 aa9.43□□□□□ -0.9
PHGDH-215ENST00000641371 CFLARO15519 480 aa9.43□□□□□ -0.9
PHGDH-215ENST00000641371 CCNDBP1O95273 360 aa9.43□□□□□ -0.9
PHGDH-215ENST00000641371 CEACAM5P06731 702 aa9.43□□□□□ -0.9
PHGDH-215ENST00000641371 ASGR2P07307 311 aa9.43□□□□□ -0.9
PHGDH-215ENST00000641371 SLC2A4P14672 509 aa9.43□□□□□ -0.9
PHGDH-215ENST00000641371 EPORP19235 508 aa9.43□□□□□ -0.9
PHGDH-215ENST00000641371 HRH2P25021 359 aa9.43□□□□□ -0.9
PHGDH-215ENST00000641371 THOP1P52888 689 aa9.43□□□□□ -0.9
PHGDH-215ENST00000641371 MTTPP55157 894 aa9.43□□□□□ -0.9
PHGDH-215ENST00000641371 TBPL1P62380 186 aa9.43□□□□□ -0.9
PHGDH-215ENST00000641371 LRRC74AQ0VAA2 488 aa9.43□□□□□ -0.9
PHGDH-215ENST00000641371 ABRAXAS2Q15018 415 aa9.43□□□□□ -0.9
PHGDH-215ENST00000641371 CPSF6Q16630 551 aaKnown RBP eCLIP9.43□□□□□ -0.9
PHGDH-215ENST00000641371 C18orf21Q32NC0 220 aaPredicted RBP9.43□□□□□ -0.9
PHGDH-215ENST00000641371 XKR6Q5GH73 641 aa9.43□□□□□ -0.9
PHGDH-215ENST00000641371 SAMD4BQ5PRF9 694 aaKnown RBP9.43□□□□□ -0.9
PHGDH-215ENST00000641371 PRAMEF14Q5SWL7 426 aa9.43□□□□□ -0.9
PHGDH-215ENST00000641371 PRAMEF13Q5VWM6 474 aa9.43□□□□□ -0.9
PHGDH-215ENST00000641371 KIAA0895LQ68EN5 471 aa9.43□□□□□ -0.9
PHGDH-215ENST00000641371 REP15Q6BDI9 236 aa9.43□□□□□ -0.9
PHGDH-215ENST00000641371 MED27Q6P2C8 311 aa9.43□□□□□ -0.9
PHGDH-215ENST00000641371 PGM2L1Q6PCE3 622 aa9.43□□□□□ -0.9
PHGDH-215ENST00000641371 AAGABQ6PD74 315 aa9.43□□□□□ -0.9
PHGDH-215ENST00000641371 BLOC1S3Q6QNY0 202 aa9.43□□□□□ -0.9
PHGDH-215ENST00000641371 TMEM92Q6UXU6 159 aa9.43□□□□□ -0.9
PHGDH-215ENST00000641371 MBOAT1Q6ZNC8 495 aa9.43□□□□□ -0.9
PHGDH-215ENST00000641371 ADHFE1Q8IWW8 467 aa9.43□□□□□ -0.9
PHGDH-215ENST00000641371 PGBD3Q8N328 593 aa9.43□□□□□ -0.9
PHGDH-215ENST00000641371 FBXW8Q8N3Y1 598 aa9.43□□□□□ -0.9
PHGDH-215ENST00000641371 SFRP1Q8N474 314 aa9.43□□□□□ -0.9
PHGDH-215ENST00000641371 AVL9Q8NBF6 648 aa9.43□□□□□ -0.9
PHGDH-215ENST00000641371 TSTD1Q8NFU3 115 aa9.43□□□□□ -0.9
PHGDH-215ENST00000641371 NAT14Q8WUY8 206 aa9.43□□□□□ -0.9
PHGDH-215ENST00000641371 ZNF480Q8WV37 535 aa9.43□□□□□ -0.9
PHGDH-215ENST00000641371 ZFPM2Q8WW38 1151 aa9.43□□□□□ -0.9
PHGDH-215ENST00000641371 SLC5A11Q8WWX8 675 aa9.43□□□□□ -0.9
PHGDH-215ENST00000641371 SMPDL3AQ92484 453 aa9.43□□□□□ -0.9
PHGDH-215ENST00000641371 POP5Q969H6 163 aaKnown RBP9.43□□□□□ -0.9
PHGDH-215ENST00000641371 RCN3Q96D15 328 aa9.43□□□□□ -0.9
PHGDH-215ENST00000641371 SPDL1Q96EA4 605 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms