RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-223ENST00000640640 NT5EP21589 574 aa17.17■□□□□ 0.34
SCARB2-223ENST00000640640 FSHRP23945 695 aa17.17■□□□□ 0.34
SCARB2-223ENST00000640640 LMAN2Q12907 356 aa17.17■□□□□ 0.34
SCARB2-223ENST00000640640 TNFAIP8L2Q6P589 184 aaPredicted RBP17.17■□□□□ 0.34
SCARB2-223ENST00000640640 HM13Q8TCT9 377 aa17.17■□□□□ 0.34
SCARB2-223ENST00000640640 S100ZQ8WXG8 99 aa17.17■□□□□ 0.34
SCARB2-223ENST00000640640 SCAMP4Q969E2 229 aa17.17■□□□□ 0.34
SCARB2-223ENST00000640640 LMLNQ96KR4 655 aa17.17■□□□□ 0.34
SCARB2-223ENST00000640640 CD244Q9BZW8 370 aa17.17■□□□□ 0.34
SCARB2-223ENST00000640640 SSR3Q9UNL2 185 aa17.17■□□□□ 0.34
SCARB2-223ENST00000640640 TOGARAM1Q9Y4F4 1720 aa17.17■□□□□ 0.34
SCARB2-223ENST00000640640 GTPBP1O00178 669 aaKnown RBP17.17■□□□□ 0.34
SCARB2-223ENST00000640640 CASP9P55211 416 aa17.17■□□□□ 0.34
SCARB2-223ENST00000640640 DPY19L3Q6ZPD9 716 aa17.17■□□□□ 0.34
SCARB2-223ENST00000640640 PRR23BQ6ZRT6 265 aa17.17■□□□□ 0.34
SCARB2-223ENST00000640640 THOC6Q86W42 341 aaKnown RBP17.17■□□□□ 0.34
SCARB2-223ENST00000640640 POMGNT2Q8NAT1 580 aa17.17■□□□□ 0.34
SCARB2-223ENST00000640640 SMYD1Q8NB12 490 aa17.17■□□□□ 0.34
SCARB2-223ENST00000640640 OR5K1Q8NHB7 308 aa17.17■□□□□ 0.34
SCARB2-223ENST00000640640 MCFD2Q8NI22 146 aa17.17■□□□□ 0.34
SCARB2-223ENST00000640640 SLC38A4Q969I6 547 aa17.17■□□□□ 0.34
SCARB2-223ENST00000640640 RSPH9Q9H1X1 276 aaPredicted RBP17.17■□□□□ 0.34
SCARB2-223ENST00000640640 PDPK1O15530 556 aa17.16■□□□□ 0.34
SCARB2-223ENST00000640640 ACADVLP49748 655 aa17.16■□□□□ 0.34
SCARB2-223ENST00000640640 STXBP1P61764 594 aaKnown RBP17.16■□□□□ 0.34
SCARB2-223ENST00000640640 LARS2Q15031 903 aaKnown RBP17.16■□□□□ 0.34
SCARB2-223ENST00000640640 PSAPL1Q6NUJ1 521 aa17.16■□□□□ 0.34
SCARB2-223ENST00000640640 ZNF382Q96SR6 550 aa17.16■□□□□ 0.34
SCARB2-223ENST00000640640 TP73O15350 636 aa17.16■□□□□ 0.34
SCARB2-223ENST00000640640 MMP20O60882 483 aa17.16■□□□□ 0.34
SCARB2-223ENST00000640640 MFN2O95140 757 aa17.16■□□□□ 0.34
SCARB2-223ENST00000640640 HNF1BP35680 557 aa17.16■□□□□ 0.34
SCARB2-223ENST00000640640 CLLU1OSQ5K130 101 aa17.16■□□□□ 0.34
SCARB2-223ENST00000640640 SLCO6A1Q86UG4 719 aa17.16■□□□□ 0.34
SCARB2-223ENST00000640640 ZZZ3Q8IYH5 903 aa17.16■□□□□ 0.34
SCARB2-223ENST00000640640 POC5Q8NA72 575 aa17.16■□□□□ 0.34
SCARB2-223ENST00000640640 TFGQ92734 400 aaPredicted RBP17.16■□□□□ 0.34
SCARB2-223ENST00000640640 ZNF641Q96N77 438 aaPredicted RBP17.16■□□□□ 0.34
SCARB2-223ENST00000640640 FANCEQ9HB96 536 aa17.16■□□□□ 0.34
SCARB2-223ENST00000640640 ZCCHC3Q9NUD5 404 aaKnown RBP17.16■□□□□ 0.34
SCARB2-223ENST00000640640 HLA-DQA2P01906 255 aa17.16■□□□□ 0.34
SCARB2-223ENST00000640640 GLDCP23378 1020 aa17.16■□□□□ 0.34
SCARB2-223ENST00000640640 GDI1P31150 447 aa17.16■□□□□ 0.34
SCARB2-223ENST00000640640 ACTR1BP42025 376 aa17.16■□□□□ 0.34
SCARB2-223ENST00000640640 ETV4P43268 484 aa17.16■□□□□ 0.34
SCARB2-223ENST00000640640 CLCNKAP51800 687 aa17.16■□□□□ 0.34
SCARB2-223ENST00000640640 ACTR1AP61163 376 aa17.16■□□□□ 0.34
SCARB2-223ENST00000640640 COX10Q12887 443 aa17.16■□□□□ 0.34
SCARB2-223ENST00000640640 PPP1R8Q12972 351 aaKnown RBP17.16■□□□□ 0.34
SCARB2-223ENST00000640640 SNAPC1Q16533 368 aa17.16■□□□□ 0.34
SCARB2-223ENST00000640640 LRRTM4Q86VH4 590 aa17.16■□□□□ 0.34
SCARB2-223ENST00000640640 FAM129CQ86XR2 697 aa17.16■□□□□ 0.34
SCARB2-223ENST00000640640 GPR135Q8IZ08 494 aa17.16■□□□□ 0.34
SCARB2-223ENST00000640640 ZCCHC10Q8TBK6 192 aa17.16■□□□□ 0.34
SCARB2-223ENST00000640640 GTPBP3Q969Y2 492 aaKnown RBP17.16■□□□□ 0.34
SCARB2-223ENST00000640640 OSBPL10Q9BXB5 764 aa17.16■□□□□ 0.34
SCARB2-223ENST00000640640 TMED5Q9Y3A6 229 aa17.16■□□□□ 0.34
SCARB2-223ENST00000640640 EDDM13A0A1B0GTR0 161 aa17.16■□□□□ 0.34
SCARB2-223ENST00000640640 TEX28O15482 410 aa17.16■□□□□ 0.34
SCARB2-223ENST00000640640 ENGP17813 658 aa17.16■□□□□ 0.34
SCARB2-223ENST00000640640 NR4A1P22736 598 aa17.16■□□□□ 0.34
SCARB2-223ENST00000640640 EIF2B2P49770 351 aaKnown RBP17.16■□□□□ 0.34
SCARB2-223ENST00000640640 MBOAT1Q6ZNC8 495 aa17.16■□□□□ 0.34
SCARB2-223ENST00000640640 MAST2Q6P0Q8 1798 aa17.15■□□□□ 0.34
SCARB2-223ENST00000640640 CDH3P22223 829 aa17.15■□□□□ 0.34
SCARB2-223ENST00000640640 TPP2P29144 1249 aaPredicted RBP17.15■□□□□ 0.34
SCARB2-223ENST00000640640 HSD17B2P37059 387 aa17.15■□□□□ 0.34
SCARB2-223ENST00000640640 MAGEA6P43360 314 aa17.15■□□□□ 0.34
SCARB2-223ENST00000640640 UNC50Q53HI1 259 aa17.15■□□□□ 0.34
SCARB2-223ENST00000640640 SPIN4Q56A73 249 aa17.15■□□□□ 0.34
SCARB2-223ENST00000640640 PPP2R2DQ66LE6 453 aa17.15■□□□□ 0.34
SCARB2-223ENST00000640640 TRNP1Q6NT89 227 aa17.15■□□□□ 0.34
SCARB2-223ENST00000640640 PRR11Q96HE9 360 aaPredicted RBP17.15■□□□□ 0.34
SCARB2-223ENST00000640640 SRMSQ9H3Y6 488 aa17.15■□□□□ 0.34
SCARB2-223ENST00000640640 LRRC42Q9Y546 428 aa17.15■□□□□ 0.34
SCARB2-223ENST00000640640 BDKRB1P46663 353 aa17.15■□□□□ 0.34
SCARB2-223ENST00000640640 CDKN2DP55273 166 aa17.15■□□□□ 0.34
SCARB2-223ENST00000640640 PACRGLQ8N7B6 248 aa17.15■□□□□ 0.34
SCARB2-223ENST00000640640 ENDOVQ8N8Q3 282 aaKnown RBP17.15■□□□□ 0.34
SCARB2-223ENST00000640640 SNNO75324 88 aaPredicted RBP17.15■□□□□ 0.34
SCARB2-223ENST00000640640 GADD45GO95257 159 aa17.15■□□□□ 0.34
SCARB2-223ENST00000640640 ANO7Q6IWH7 933 aa17.15■□□□□ 0.34
SCARB2-223ENST00000640640 NUDT13Q86X67 352 aa17.15■□□□□ 0.34
SCARB2-223ENST00000640640 RAB11FIP5Q9BXF6 653 aa17.15■□□□□ 0.34
SCARB2-223ENST00000640640 GPR153Q6NV75 609 aa17.14■□□□□ 0.34
SCARB2-223ENST00000640640 DNASE1L2Q92874 299 aa17.14■□□□□ 0.34
SCARB2-223ENST00000640640 TPK1Q9H3S4 243 aa17.14■□□□□ 0.34
SCARB2-223ENST00000640640 CARS2Q9HA77 564 aaKnown RBP17.14■□□□□ 0.34
SCARB2-223ENST00000640640 MRPS30Q9NP92 439 aaKnown RBP17.14■□□□□ 0.34
SCARB2-223ENST00000640640 CFAP20Q9Y6A4 193 aaKnown RBP17.14■□□□□ 0.34
SCARB2-223ENST00000640640 TMCC2O75069 709 aa17.14■□□□□ 0.33
SCARB2-223ENST00000640640 HLA-EP13747 358 aa17.14■□□□□ 0.33
SCARB2-223ENST00000640640 TIE1P35590 1138 aa17.14■□□□□ 0.33
SCARB2-223ENST00000640640 HMGCLP35914 325 aa17.14■□□□□ 0.33
SCARB2-223ENST00000640640 PREPP48147 710 aa17.14■□□□□ 0.33
SCARB2-223ENST00000640640 CCR8P51685 355 aa17.14■□□□□ 0.33
SCARB2-223ENST00000640640 RPS6KA3P51812 740 aa17.14■□□□□ 0.33
SCARB2-223ENST00000640640 PKDCCQ504Y2 493 aa17.14■□□□□ 0.33
SCARB2-223ENST00000640640 DPY19L2P1Q6NXN4 242 aa17.14■□□□□ 0.33
SCARB2-223ENST00000640640 KCTD8Q6ZWB6 473 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms