RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 TSPAN5P62079 268 aa18.1■□□□□ 0.49
SCARB2-213ENST00000638680 OGDHQ02218 1023 aa18.1■□□□□ 0.49
SCARB2-213ENST00000638680 MVKQ03426 396 aa18.1■□□□□ 0.49
SCARB2-213ENST00000638680 CBLBQ13191 982 aa18.1■□□□□ 0.49
SCARB2-213ENST00000638680 TMEM44Q2T9K0 475 aa18.1■□□□□ 0.49
SCARB2-213ENST00000638680 CLEC20AQ6ZU45 233 aa18.1■□□□□ 0.49
SCARB2-213ENST00000638680 GALNT13Q8IUC8 556 aa18.1■□□□□ 0.49
SCARB2-213ENST00000638680 NTAN1Q96AB6 310 aa18.1■□□□□ 0.49
SCARB2-213ENST00000638680 ARMC5Q96C12 935 aa18.1■□□□□ 0.49
SCARB2-213ENST00000638680 PYCR2Q96C36 320 aa18.1■□□□□ 0.49
SCARB2-213ENST00000638680 FZD8Q9H461 694 aa18.1■□□□□ 0.49
SCARB2-213ENST00000638680 FARSBQ9NSD9 589 aaKnown RBP18.1■□□□□ 0.49
SCARB2-213ENST00000638680 ITIH1P19827 911 aa18.09■□□□□ 0.49
SCARB2-213ENST00000638680 ADAM8P78325 824 aa18.09■□□□□ 0.49
SCARB2-213ENST00000638680 OLIG2Q13516 323 aa18.09■□□□□ 0.49
SCARB2-213ENST00000638680 PLPP4Q5VZY2 271 aa18.09■□□□□ 0.49
SCARB2-213ENST00000638680 IQCHQ86VS3 1027 aa18.09■□□□□ 0.49
SCARB2-213ENST00000638680 BARD1Q99728 777 aaKnown RBP18.09■□□□□ 0.49
SCARB2-213ENST00000638680 MED31Q9Y3C7 131 aa18.09■□□□□ 0.49
SCARB2-213ENST00000638680 PRNPP04156 253 aa18.09■□□□□ 0.49
SCARB2-213ENST00000638680 LBX2Q6XYB7 198 aa18.09■□□□□ 0.49
SCARB2-213ENST00000638680 PRR23CQ6ZRP0 262 aa18.09■□□□□ 0.49
SCARB2-213ENST00000638680 MARCH9Q86YJ5 346 aa18.09■□□□□ 0.49
SCARB2-213ENST00000638680 OR5AK3PQ8NH89 298 aa18.09■□□□□ 0.49
SCARB2-213ENST00000638680 IRF2BPLQ9H1B7 796 aa18.09■□□□□ 0.49
SCARB2-213ENST00000638680 FLRT1Q9NZU1 646 aa18.09■□□□□ 0.49
SCARB2-213ENST00000638680 PLIN4Q96Q06 1357 aa18.09■□□□□ 0.49
SCARB2-213ENST00000638680 WRBO00258 174 aa18.09■□□□□ 0.49
SCARB2-213ENST00000638680 ACVR2AP27037 513 aa18.09■□□□□ 0.49
SCARB2-213ENST00000638680 WASP42768 502 aa18.09■□□□□ 0.49
SCARB2-213ENST00000638680 NCBP2P52298 156 aaKnown RBP eCLIP18.09■□□□□ 0.49
SCARB2-213ENST00000638680 KLHL35Q6PF15 583 aa18.09■□□□□ 0.49
SCARB2-213ENST00000638680 RPS27LQ71UM5 84 aaKnown RBP18.09■□□□□ 0.49
SCARB2-213ENST00000638680 TMEM199Q8N511 208 aa18.09■□□□□ 0.49
SCARB2-213ENST00000638680 CARD8Q9Y2G2 431 aa18.09■□□□□ 0.49
SCARB2-213ENST00000638680 INMTO95050 263 aa18.09■□□□□ 0.49
SCARB2-213ENST00000638680 PRAMEF12O95522 483 aa18.09■□□□□ 0.49
SCARB2-213ENST00000638680 ZNF829Q3KNS6 432 aaPredicted RBP18.09■□□□□ 0.49
SCARB2-213ENST00000638680 CRY2Q49AN0 593 aa18.09■□□□□ 0.49
SCARB2-213ENST00000638680 IFNLR1Q8IU57 520 aaPredicted RBP18.09■□□□□ 0.49
SCARB2-213ENST00000638680 CENPSQ8N2Z9 138 aa18.09■□□□□ 0.49
SCARB2-213ENST00000638680 DNAJA4Q8WW22 397 aaPredicted RBP18.09■□□□□ 0.49
SCARB2-213ENST00000638680 SLC6A15Q9H2J7 730 aa18.09■□□□□ 0.49
SCARB2-213ENST00000638680 PIGVQ9NUD9 493 aa18.09■□□□□ 0.49
SCARB2-213ENST00000638680 MARK1Q9P0L2 795 aa18.09■□□□□ 0.49
SCARB2-213ENST00000638680 TBC1D14Q9P2M4 693 aa18.09■□□□□ 0.49
SCARB2-213ENST00000638680 A0A1W2PPW3 197 aa18.08■□□□□ 0.49
SCARB2-213ENST00000638680 HMGB3O15347 200 aaKnown RBP18.08■□□□□ 0.49
SCARB2-213ENST00000638680 VIPP01282 170 aa18.08■□□□□ 0.49
SCARB2-213ENST00000638680 KCNA5P22460 613 aa18.08■□□□□ 0.49
SCARB2-213ENST00000638680 CPN2P22792 545 aa18.08■□□□□ 0.49
SCARB2-213ENST00000638680 MND1Q9BWT6 205 aa18.08■□□□□ 0.49
SCARB2-213ENST00000638680 LGR4Q9BXB1 951 aa18.08■□□□□ 0.49
SCARB2-213ENST00000638680 GALPQ9UBC7 116 aa18.08■□□□□ 0.49
SCARB2-213ENST00000638680 RBM47A0AV96 593 aaKnown RBP18.08■□□□□ 0.49
SCARB2-213ENST00000638680 PRLP01236 227 aa18.08■□□□□ 0.49
SCARB2-213ENST00000638680 SLC35G6P0C7Q6 338 aa18.08■□□□□ 0.49
SCARB2-213ENST00000638680 DEFA5Q01523 94 aa18.08■□□□□ 0.49
SCARB2-213ENST00000638680 FBXO43Q4G163 708 aa18.08■□□□□ 0.49
SCARB2-213ENST00000638680 RBM20Q5T481 1227 aaKnown RBP18.08■□□□□ 0.49
SCARB2-213ENST00000638680 PLEKHA1Q9HB21 404 aa18.08■□□□□ 0.49
SCARB2-213ENST00000638680 DEC1Q9P2X7 70 aa18.08■□□□□ 0.49
SCARB2-213ENST00000638680 SOWAHBA6NEL2 793 aa18.08■□□□□ 0.48
SCARB2-213ENST00000638680 LRRC72A6NJI9 287 aa18.08■□□□□ 0.48
SCARB2-213ENST00000638680 GNB5O14775 395 aa18.08■□□□□ 0.48
SCARB2-213ENST00000638680 OR10Q1Q8NGQ4 319 aa18.08■□□□□ 0.48
SCARB2-213ENST00000638680 PRORSD1PA6NEY8 169 aa18.08■□□□□ 0.48
SCARB2-213ENST00000638680 DCLK1O15075 740 aa18.08■□□□□ 0.48
SCARB2-213ENST00000638680 FGF19O95750 216 aa18.08■□□□□ 0.48
SCARB2-213ENST00000638680 IFNA7P01567 189 aa18.08■□□□□ 0.48
SCARB2-213ENST00000638680 PRKACGP22612 351 aa18.08■□□□□ 0.48
SCARB2-213ENST00000638680 ZNF773Q6PK81 442 aa18.08■□□□□ 0.48
SCARB2-213ENST00000638680 COX18Q8N8Q8 333 aa18.08■□□□□ 0.48
SCARB2-213ENST00000638680 SPERTQ8NA61 448 aa18.08■□□□□ 0.48
SCARB2-213ENST00000638680 PYURFQ96I23 114 aa18.08■□□□□ 0.48
SCARB2-213ENST00000638680 HEPHQ9BQS7 1158 aa18.08■□□□□ 0.48
SCARB2-213ENST00000638680 VPS29Q9UBQ0 182 aa18.08■□□□□ 0.48
SCARB2-213ENST00000638680 SLC38A8A6NNN8 435 aa18.08■□□□□ 0.48
SCARB2-213ENST00000638680 RNASEH2AO75792 299 aaKnown RBP18.08■□□□□ 0.48
SCARB2-213ENST00000638680 TUBA1BP68363 451 aa18.08■□□□□ 0.48
SCARB2-213ENST00000638680 VARS2Q5ST30 1063 aaKnown RBP18.08■□□□□ 0.48
SCARB2-213ENST00000638680 QSOX2Q6ZRP7 698 aa18.08■□□□□ 0.48
SCARB2-213ENST00000638680 TUBA1AQ71U36 451 aa18.08■□□□□ 0.48
SCARB2-213ENST00000638680 ARL14EPQ8N8R7 260 aaPredicted RBP18.08■□□□□ 0.48
SCARB2-213ENST00000638680 EFHD2Q96C19 240 aaPredicted RBP18.08■□□□□ 0.48
SCARB2-213ENST00000638680 CLCC1Q96S66 551 aa18.08■□□□□ 0.48
SCARB2-213ENST00000638680 SYN3O14994 580 aa18.07■□□□□ 0.48
SCARB2-213ENST00000638680 EPHX1P07099 455 aa18.07■□□□□ 0.48
SCARB2-213ENST00000638680 LINGO3P0C6S8 592 aa18.07■□□□□ 0.48
SCARB2-213ENST00000638680 PRKCHP24723 683 aa18.07■□□□□ 0.48
SCARB2-213ENST00000638680 ARCN1P48444 511 aaKnown RBP18.07■□□□□ 0.48
SCARB2-213ENST00000638680 DSTNP60981 165 aa18.07■□□□□ 0.48
SCARB2-213ENST00000638680 RABL3Q5HYI8 236 aa18.07■□□□□ 0.48
SCARB2-213ENST00000638680 SH3D19Q5HYK7 790 aa18.07■□□□□ 0.48
SCARB2-213ENST00000638680 FUT10Q6P4F1 479 aa18.07■□□□□ 0.48
SCARB2-213ENST00000638680 TOMM5Q8N4H5 51 aa18.07■□□□□ 0.48
SCARB2-213ENST00000638680 TWNKQ96RR1 684 aa18.07■□□□□ 0.48
SCARB2-213ENST00000638680 TMED9Q9BVK6 235 aa18.07■□□□□ 0.48
SCARB2-213ENST00000638680 IRAK2O43187 625 aa18.07■□□□□ 0.48
SCARB2-213ENST00000638680 DLDP09622 509 aaKnown RBP18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms