RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 MIPEPQ99797 713 aa14.89□□□□□ -0.03
CLN6-219ENST00000637329 PCBD2Q9H0N5 130 aa14.89□□□□□ -0.03
CLN6-219ENST00000637329 ATG10Q9H0Y0 220 aa14.89□□□□□ -0.03
CLN6-219ENST00000637329 WDR55Q9H6Y2 383 aaPredicted RBP14.89□□□□□ -0.03
CLN6-219ENST00000637329 AASDHPPTQ9NRN7 309 aa14.89□□□□□ -0.03
CLN6-219ENST00000637329 LNPEPQ9UIQ6 1025 aa14.89□□□□□ -0.03
CLN6-219ENST00000637329 SLC22A14Q9Y267 594 aa14.89□□□□□ -0.03
CLN6-219ENST00000637329 DCHS1Q96JQ0 3298 aa14.89□□□□□ -0.03
CLN6-219ENST00000637329 CACNA1BQ00975 2339 aa14.88□□□□□ -0.03
CLN6-219ENST00000637329 DOCK9Q9BZ29 2069 aa14.88□□□□□ -0.03
CLN6-219ENST00000637329 MYO15AQ9UKN7 3530 aa14.88□□□□□ -0.03
CLN6-219ENST00000637329 A0A1W2PR77 199 aa14.88□□□□□ -0.03
CLN6-219ENST00000637329 KRT87PA6NCN2 255 aa14.88□□□□□ -0.03
CLN6-219ENST00000637329 A6NCN8 305 aa14.88□□□□□ -0.03
CLN6-219ENST00000637329 CAPN14A8MX76 684 aa14.88□□□□□ -0.03
CLN6-219ENST00000637329 E7ENX8 843 aa14.88□□□□□ -0.03
CLN6-219ENST00000637329 E9PBE3 544 aa14.88□□□□□ -0.03
CLN6-219ENST00000637329 CLGNO14967 610 aa14.88□□□□□ -0.03
CLN6-219ENST00000637329 PI15O43692 258 aa14.88□□□□□ -0.03
CLN6-219ENST00000637329 KLHL41O60662 606 aa14.88□□□□□ -0.03
CLN6-219ENST00000637329 UNC5CO95185 931 aa14.88□□□□□ -0.03
CLN6-219ENST00000637329 KRT6AP02538 564 aa14.88□□□□□ -0.03
CLN6-219ENST00000637329 KRT6BP04259 564 aa14.88□□□□□ -0.03
CLN6-219ENST00000637329 GNAZP19086 355 aa14.88□□□□□ -0.03
CLN6-219ENST00000637329 ITPKAP23677 461 aa14.88□□□□□ -0.03
CLN6-219ENST00000637329 RPL10P27635 214 aaKnown RBP14.88□□□□□ -0.03
CLN6-219ENST00000637329 CD38P28907 300 aa14.88□□□□□ -0.03
CLN6-219ENST00000637329 HNF4AP41235 474 aa14.88□□□□□ -0.03
CLN6-219ENST00000637329 KRT6CP48668 564 aa14.88□□□□□ -0.03
CLN6-219ENST00000637329 ATP4BP51164 291 aa14.88□□□□□ -0.03
CLN6-219ENST00000637329 HNRNPH2P55795 449 aaKnown RBP14.88□□□□□ -0.03
CLN6-219ENST00000637329 TAP2Q03519 686 aa14.88□□□□□ -0.03
CLN6-219ENST00000637329 FZD2Q14332 565 aa14.88□□□□□ -0.03
CLN6-219ENST00000637329 C10orf62Q5T681 223 aaPredicted RBP14.88□□□□□ -0.03
CLN6-219ENST00000637329 NXNQ6DKJ4 435 aa14.88□□□□□ -0.03
CLN6-219ENST00000637329 OGFOD2Q6N063 350 aa14.88□□□□□ -0.03
CLN6-219ENST00000637329 CHSY3Q70JA7 882 aa14.88□□□□□ -0.03
CLN6-219ENST00000637329 LARP4Q71RC2 724 aaKnown RBP eCLIP14.88□□□□□ -0.03
CLN6-219ENST00000637329 WDR5BQ86VZ2 330 aa14.88□□□□□ -0.03
CLN6-219ENST00000637329 HID1Q8IV36 788 aa14.88□□□□□ -0.03
CLN6-219ENST00000637329 CPSF7Q8N684 471 aaKnown RBP14.88□□□□□ -0.03
CLN6-219ENST00000637329 GPBAR1Q8TDU6 330 aa14.88□□□□□ -0.03
CLN6-219ENST00000637329 TSACCQ96A04 125 aaPredicted RBP14.88□□□□□ -0.03
CLN6-219ENST00000637329 PYCR2Q96C36 320 aa14.88□□□□□ -0.03
CLN6-219ENST00000637329 HSPA12BQ96MM6 686 aa14.88□□□□□ -0.03
CLN6-219ENST00000637329 CDK15Q96Q40 435 aa14.88□□□□□ -0.03
CLN6-219ENST00000637329 INSM2Q96T92 566 aaPredicted RBP14.88□□□□□ -0.03
CLN6-219ENST00000637329 HAUS8Q9BT25 410 aa14.88□□□□□ -0.03
CLN6-219ENST00000637329 CCDC106Q9BWC9 280 aa14.88□□□□□ -0.03
CLN6-219ENST00000637329 GSDMCQ9BYG8 508 aa14.88□□□□□ -0.03
CLN6-219ENST00000637329 DUSP15Q9H1R2 295 aaPredicted RBP14.88□□□□□ -0.03
CLN6-219ENST00000637329 TUBB1Q9H4B7 451 aa14.88□□□□□ -0.03
CLN6-219ENST00000637329 EHD1Q9H4M9 534 aa14.88□□□□□ -0.03
CLN6-219ENST00000637329 ZNF385DQ9H6B1 395 aa14.88□□□□□ -0.03
CLN6-219ENST00000637329 KIR3DX1Q9H7L2 352 aa14.88□□□□□ -0.03
CLN6-219ENST00000637329 IMP3Q9NV31 184 aaKnown RBP14.88□□□□□ -0.03
CLN6-219ENST00000637329 SPATA6Q9NWH7 488 aaPredicted RBP14.88□□□□□ -0.03
CLN6-219ENST00000637329 SNX6Q9UNH7 406 aa14.88□□□□□ -0.03
CLN6-219ENST00000637329 WDR37Q9Y2I8 494 aa14.88□□□□□ -0.03
CLN6-219ENST00000637329 KCNE2Q9Y6J6 123 aa14.88□□□□□ -0.03
CLN6-219ENST00000637329 KCNE1BA0A087WTH5 132 aa14.87□□□□□ -0.03
CLN6-219ENST00000637329 SERTM1A2A2V5 107 aa14.87□□□□□ -0.03
CLN6-219ENST00000637329 PRR35P0CG20 571 aa14.87□□□□□ -0.03
CLN6-219ENST00000637329 TDGF1P13385 188 aa14.87□□□□□ -0.03
CLN6-219ENST00000637329 SLC2A4P14672 509 aa14.87□□□□□ -0.03
CLN6-219ENST00000637329 JUPP14923 745 aa14.87□□□□□ -0.03
CLN6-219ENST00000637329 NCF2P19878 526 aaPredicted RBP14.87□□□□□ -0.03
CLN6-219ENST00000637329 PRDX6P30041 224 aa14.87□□□□□ -0.03
CLN6-219ENST00000637329 ACTR1BP42025 376 aa14.87□□□□□ -0.03
CLN6-219ENST00000637329 CASP2P42575 452 aa14.87□□□□□ -0.03
CLN6-219ENST00000637329 ACTR1AP61163 376 aa14.87□□□□□ -0.03
CLN6-219ENST00000637329 EIF2B5Q13144 721 aaKnown RBP14.87□□□□□ -0.03
CLN6-219ENST00000637329 RPE65Q16518 533 aa14.87□□□□□ -0.03
CLN6-219ENST00000637329 SMU1Q2TAY7 513 aa14.87□□□□□ -0.03
CLN6-219ENST00000637329 WDR45BQ5MNZ6 344 aa14.87□□□□□ -0.03
CLN6-219ENST00000637329 GRHL2Q6ISB3 625 aa14.87□□□□□ -0.03
CLN6-219ENST00000637329 LCTLQ6UWM7 567 aa14.87□□□□□ -0.03
CLN6-219ENST00000637329 PHACTR4Q8IZ21 702 aa14.87□□□□□ -0.03
CLN6-219ENST00000637329 SETD7Q8WTS6 366 aaKnown RBP14.87□□□□□ -0.03
CLN6-219ENST00000637329 DNASE2BQ8WZ79 361 aa14.87□□□□□ -0.03
CLN6-219ENST00000637329 USP7Q93009 1102 aa14.87□□□□□ -0.03
CLN6-219ENST00000637329 WDR34Q96EX3 536 aa14.87□□□□□ -0.03
CLN6-219ENST00000637329 PPP1R36Q96LQ0 422 aa14.87□□□□□ -0.03
CLN6-219ENST00000637329 MENTQ9BUN1 341 aa14.87□□□□□ -0.03
CLN6-219ENST00000637329 TMEM168Q9H0V1 697 aa14.87□□□□□ -0.03
CLN6-219ENST00000637329 INTS7Q9NVH2 962 aaKnown RBP14.87□□□□□ -0.03
CLN6-219ENST00000637329 PNMA8BQ9ULN7 279 aaPredicted RBP14.87□□□□□ -0.03
CLN6-219ENST00000637329 BTRCQ9Y297 605 aa14.87□□□□□ -0.03
CLN6-219ENST00000637329 DYRK1BQ9Y463 629 aa14.87□□□□□ -0.03
CLN6-219ENST00000637329 PLEKHM1Q9Y4G2 1056 aa14.87□□□□□ -0.03
CLN6-219ENST00000637329 TIMM22Q9Y584 194 aa14.87□□□□□ -0.03
CLN6-219ENST00000637329 CAPN7Q9Y6W3 813 aa14.87□□□□□ -0.03
CLN6-219ENST00000637329 COLEC10Q9Y6Z7 277 aa14.87□□□□□ -0.03
CLN6-219ENST00000637329 UBDO15205 165 aa14.86□□□□□ -0.03
CLN6-219ENST00000637329 MAP3K13O43283 966 aa14.86□□□□□ -0.03
CLN6-219ENST00000637329 WFS1O76024 890 aa14.86□□□□□ -0.03
CLN6-219ENST00000637329 F3P13726 295 aa14.86□□□□□ -0.03
CLN6-219ENST00000637329 CALB2P22676 271 aa14.86□□□□□ -0.03
CLN6-219ENST00000637329 PKLRP30613 574 aa14.86□□□□□ -0.03
CLN6-219ENST00000637329 MRPL19P49406 292 aaKnown RBP14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms