RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 ZNF544Q6NX49 715 aa14.45□□□□□ -0.1
CACNA1A-220ENST00000635988 METTL2BQ6P1Q9 378 aaKnown RBP14.45□□□□□ -0.1
CACNA1A-220ENST00000635988 PSKH2Q96QS6 385 aa14.45□□□□□ -0.1
CACNA1A-220ENST00000635988 OLA1Q9NTK5 396 aaKnown RBP14.45□□□□□ -0.1
CACNA1A-220ENST00000635988 PLCXD1Q9NUJ7 323 aa14.45□□□□□ -0.1
CACNA1A-220ENST00000635988 FKBPLQ9UIM3 349 aa14.45□□□□□ -0.1
CACNA1A-220ENST00000635988 ZNF490Q9ULM2 529 aaPredicted RBP14.45□□□□□ -0.1
CACNA1A-220ENST00000635988 SAMHD1Q9Y3Z3 626 aaKnown RBP14.45□□□□□ -0.1
CACNA1A-220ENST00000635988 PTPRDP23468 1912 aa14.44□□□□□ -0.1
CACNA1A-220ENST00000635988 ANKRD34BA5PLL1 514 aa14.44□□□□□ -0.1
CACNA1A-220ENST00000635988 EVPLLA8MZ36 301 aa14.44□□□□□ -0.1
CACNA1A-220ENST00000635988 LOC110117498-PIK3R3F6TDL0 507 aa14.44□□□□□ -0.1
CACNA1A-220ENST00000635988 STX7O15400 261 aaKnown RBP14.44□□□□□ -0.1
CACNA1A-220ENST00000635988 DBTP11182 482 aaKnown RBP14.44□□□□□ -0.1
CACNA1A-220ENST00000635988 MYCLP1P12525 358 aaPredicted RBP14.44□□□□□ -0.1
CACNA1A-220ENST00000635988 TGFBR1P36897 503 aa14.44□□□□□ -0.1
CACNA1A-220ENST00000635988 NKX2-5P52952 324 aaPredicted RBP14.44□□□□□ -0.1
CACNA1A-220ENST00000635988 CLDN8P56748 225 aa14.44□□□□□ -0.1
CACNA1A-220ENST00000635988 RPP38P78345 283 aaKnown RBP14.44□□□□□ -0.1
CACNA1A-220ENST00000635988 MRPS6P82932 125 aaKnown RBP14.44□□□□□ -0.1
CACNA1A-220ENST00000635988 GRB14Q14449 540 aa14.44□□□□□ -0.1
CACNA1A-220ENST00000635988 C18orf21Q32NC0 220 aaPredicted RBP14.44□□□□□ -0.1
CACNA1A-220ENST00000635988 MOB2Q70IA6 237 aa14.44□□□□□ -0.1
CACNA1A-220ENST00000635988 TAS2R42Q7RTR8 314 aa14.44□□□□□ -0.1
CACNA1A-220ENST00000635988 MRPL10Q7Z7H8 261 aaKnown RBP14.44□□□□□ -0.1
CACNA1A-220ENST00000635988 SERPINA11Q86U17 422 aa14.44□□□□□ -0.1
CACNA1A-220ENST00000635988 HEATR4Q86WZ0 1026 aa14.44□□□□□ -0.1
CACNA1A-220ENST00000635988 FAM83FQ8NEG4 500 aaPredicted RBP14.44□□□□□ -0.1
CACNA1A-220ENST00000635988 PIK3R3Q92569 461 aa14.44□□□□□ -0.1
CACNA1A-220ENST00000635988 SNX18Q96RF0 628 aa14.44□□□□□ -0.1
CACNA1A-220ENST00000635988 CINPQ9BW66 212 aaPredicted RBP14.44□□□□□ -0.1
CACNA1A-220ENST00000635988 CEP44Q9C0F1 390 aa14.44□□□□□ -0.1
CACNA1A-220ENST00000635988 REEP1Q9H902 201 aa14.44□□□□□ -0.1
CACNA1A-220ENST00000635988 SERHLQ9NQF3 203 aa14.44□□□□□ -0.1
CACNA1A-220ENST00000635988 RASSF1Q9NS23 344 aa14.44□□□□□ -0.1
CACNA1A-220ENST00000635988 ZNF221Q9UK13 617 aa14.44□□□□□ -0.1
CACNA1A-220ENST00000635988 TBKBP1A7MCY6 615 aa14.44□□□□□ -0.1
CACNA1A-220ENST00000635988 H7C0S8 307 aa14.44□□□□□ -0.1
CACNA1A-220ENST00000635988 INSIG1O15503 277 aa14.44□□□□□ -0.1
CACNA1A-220ENST00000635988 DPM1O60762 260 aa14.44□□□□□ -0.1
CACNA1A-220ENST00000635988 EBLN1P0CF75 366 aa14.44□□□□□ -0.1
CACNA1A-220ENST00000635988 BCKDHAP12694 445 aa14.44□□□□□ -0.1
CACNA1A-220ENST00000635988 SPNP16150 400 aa14.44□□□□□ -0.1
CACNA1A-220ENST00000635988 ETV6P41212 452 aa14.44□□□□□ -0.1
CACNA1A-220ENST00000635988 HSPA7P48741 367 aa14.44□□□□□ -0.1
CACNA1A-220ENST00000635988 RPS14P62263 151 aaKnown RBP14.44□□□□□ -0.1
CACNA1A-220ENST00000635988 HMGCS1Q01581 520 aa14.44□□□□□ -0.1
CACNA1A-220ENST00000635988 LAPTM4AQ15012 233 aa14.44□□□□□ -0.1
CACNA1A-220ENST00000635988 FAHD1Q6P587 224 aa14.44□□□□□ -0.1
CACNA1A-220ENST00000635988 ERICH5Q6P6B1 374 aa14.44□□□□□ -0.1
CACNA1A-220ENST00000635988 SUSD1Q6UWL2 747 aa14.44□□□□□ -0.1
CACNA1A-220ENST00000635988 ARMCX6Q7L4S7 300 aa14.44□□□□□ -0.1
CACNA1A-220ENST00000635988 SLC46A3Q7Z3Q1 461 aa14.44□□□□□ -0.1
CACNA1A-220ENST00000635988 TLK2Q86UE8 772 aa14.44□□□□□ -0.1
CACNA1A-220ENST00000635988 CIR1Q86X95 450 aaPredicted RBP14.44□□□□□ -0.1
CACNA1A-220ENST00000635988 SYTL1Q8IYJ3 562 aa14.44□□□□□ -0.1
CACNA1A-220ENST00000635988 SUSD3Q96L08 255 aa14.44□□□□□ -0.1
CACNA1A-220ENST00000635988 UROC1Q96N76 676 aa14.44□□□□□ -0.1
CACNA1A-220ENST00000635988 CDADC1Q9BWV3 514 aa14.44□□□□□ -0.1
CACNA1A-220ENST00000635988 TNKS2Q9H2K2 1166 aa14.44□□□□□ -0.1
CACNA1A-220ENST00000635988 CCDC177Q9NQR7 707 aaPredicted RBP14.44□□□□□ -0.1
CACNA1A-220ENST00000635988 SLC6A13Q9NSD5 602 aa14.44□□□□□ -0.1
CACNA1A-220ENST00000635988 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.44□□□□□ -0.1
CACNA1A-220ENST00000635988 M0R082 166 aa14.43□□□□□ -0.1
CACNA1A-220ENST00000635988 FFAR3O14843 346 aa14.43□□□□□ -0.1
CACNA1A-220ENST00000635988 GPR42O15529 346 aa14.43□□□□□ -0.1
CACNA1A-220ENST00000635988 PCDHGA12O60330 932 aa14.43□□□□□ -0.1
CACNA1A-220ENST00000635988 PRPS2P11908 318 aa14.43□□□□□ -0.1
CACNA1A-220ENST00000635988 GADD45AP24522 165 aa14.43□□□□□ -0.1
CACNA1A-220ENST00000635988 RGS4P49798 205 aa14.43□□□□□ -0.1
CACNA1A-220ENST00000635988 CPT1AP50416 773 aa14.43□□□□□ -0.1
CACNA1A-220ENST00000635988 CREMQ03060 361 aa14.43□□□□□ -0.1
CACNA1A-220ENST00000635988 INO80DQ53TQ3 878 aaPredicted RBP14.43□□□□□ -0.1
CACNA1A-220ENST00000635988 SPANXN2Q5MJ10 180 aa14.43□□□□□ -0.1
CACNA1A-220ENST00000635988 CD300LGQ6UXG3 332 aa14.43□□□□□ -0.1
CACNA1A-220ENST00000635988 MSANTD1Q6ZTZ1 278 aa14.43□□□□□ -0.1
CACNA1A-220ENST00000635988 GDPD3Q7L5L3 318 aa14.43□□□□□ -0.1
CACNA1A-220ENST00000635988 GPR142Q7Z601 462 aa14.43□□□□□ -0.1
CACNA1A-220ENST00000635988 RGL4Q8IZJ4 473 aa14.43□□□□□ -0.1
CACNA1A-220ENST00000635988 IL17RDQ8NFM7 739 aa14.43□□□□□ -0.1
CACNA1A-220ENST00000635988 HRASLS5Q96KN8 279 aa14.43□□□□□ -0.1
CACNA1A-220ENST00000635988 NTMT1Q9BV86 223 aa14.43□□□□□ -0.1
CACNA1A-220ENST00000635988 EMILIN2Q9BXX0 1053 aa14.43□□□□□ -0.1
CACNA1A-220ENST00000635988 FAM126AQ9BYI3 521 aaPredicted RBP14.43□□□□□ -0.1
CACNA1A-220ENST00000635988 SLC29A3Q9BZD2 475 aa14.43□□□□□ -0.1
CACNA1A-220ENST00000635988 MAGEH1Q9H213 219 aa14.43□□□□□ -0.1
CACNA1A-220ENST00000635988 P2RY12Q9H244 342 aa14.43□□□□□ -0.1
CACNA1A-220ENST00000635988 NSUN3Q9H649 340 aaKnown RBP14.43□□□□□ -0.1
CACNA1A-220ENST00000635988 AASDHPPTQ9NRN7 309 aa14.43□□□□□ -0.1
CACNA1A-220ENST00000635988 ADARB2Q9NS39 739 aaKnown RBP14.43□□□□□ -0.1
CACNA1A-220ENST00000635988 OARD1Q9Y530 152 aa14.43□□□□□ -0.1
CACNA1A-220ENST00000635988 PCDHGB6Q9Y5F9 930 aa14.43□□□□□ -0.1
CACNA1A-220ENST00000635988 TRPV2Q9Y5S1 764 aa14.43□□□□□ -0.1
CACNA1A-220ENST00000635988 NLRC5Q86WI3 1866 aa14.43□□□□□ -0.1
CACNA1A-220ENST00000635988 PDZK1P1A8MUH7 402 aa14.43□□□□□ -0.1
CACNA1A-220ENST00000635988 E9PQ18 207 aa14.43□□□□□ -0.1
CACNA1A-220ENST00000635988 MANBAO00462 879 aa14.43□□□□□ -0.1
CACNA1A-220ENST00000635988 ZW10O43264 779 aa14.43□□□□□ -0.1
CACNA1A-220ENST00000635988 HOXB9P17482 250 aaPredicted RBP14.43□□□□□ -0.1
CACNA1A-220ENST00000635988 POLR2EP19388 210 aaKnown RBP14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms